Click here to switch to the map view.

The map label for this gene is flaB [H]

Identifier: 59712472

GI number: 59712472

Start: 2097594

End: 2098727

Strand: Reverse

Name: flaB [H]

Synonym: VF_1865

Alternate gene names: 59712472

Gene position: 2098727-2097594 (Counterclockwise)

Preceding gene: 59712473

Following gene: 59712471

Centisome position: 72.43

GC content: 39.95

Gene sequence:

>1134_bases
ATGTCTGTAACGGTAAACACCAATGTGTCTGCAATGACGGCACAGCGATATTTAAATCAAGCAACAGAACACTTAAACCA
ATCAATGGAACGCCTTTCGTCAGGTAAAAGAATTAATAGTGCGAAAGATGATGCGGCTGGTTTGCAAATATCAAATCGTT
TGAAATCTCAAATGAGTGGTTTGGATGTGGCGGTTCGTAATGCGAATGACGGTATTTCAATTGCACAAACAGCAGAAGGT
GCAATGAATGAAAGTACTAATATTTTGCAACGTATGCGCGATTTAGCACTACAGTCTTCTAATGGTTCTAATACGTTACA
AGACAGACAAGCAATTCAAGAAGAAGCGGATGCACTTAACGATGAATTAAATCGTATTGCAGAAACCACTTCTTTTGGTG
GCCGACGTTTGTTGAATGGTCAGTTTGGAACCTCAACCTTTCAGATTGGTGCCAATGCAGGTGAAGCCGTTCAACTTACT
TTAGGTAGTATGCGATCTGATACACTTGCCATGGGCGGTTTTCATTACACATCTCAAAACCAATTAAACAAAGGTTGGAC
AGTGCCAGAAGGTGGTCAAACGCTTACCATGTCATTTAATGATAAAAATGGTAAAGCTCAAGAAATCACAATTGAAGCCA
AAGCGGGTGATGATATTGAGGAATTGGCAACGTATATCAATGGCCAGAATGATACCGTTCAAGCATCCGTTGATGAGAAT
GGTCAATTACAATTATTTACTGCAGGTGATTTAGTCTCAAGTGCGGTGACATTTGGAGGATCACTCTCTGCTGAGTTAGC
CATTGGTGGTGCTGTATTTGATACTGTTAATGATTTAGACCTAACGAGTGTTGGTGGCTCACAACGTGCTATTGCAACTT
TAGATGCGGCAATGGGGTTTGTTGATAAAGAACGAGCAACGTTAGGCGCTTTCCAAAATCGCTTTGACCATGCTATCAAT
AACTTGAATAATATTCATGAAAATGTTGCCGCTTCAAACAGTCGTATTGAAGATACAGATTTTGCAAAAGAAACGGTTGA
GATGATGAAAGCTCAAATCTTACAGCAAGTGAGTTCAACAGTACTGGCACAAGCAAAACAAGCACCTGATATTGCTTTAA
AATTGCTTGGTTAA

Upstream 100 bases:

>100_bases
GATTGAATCTATTTCATCAATAGTTGTACTTTTTATTATTTAAGCTTTAGGTTTTTGTGCCGTTATAACTATTAAGATGA
AAATAAATTAAGAGATTGTT

Downstream 100 bases:

>100_bases
TTTATACCAATCGACATAACTATTTTTAAACCAGCAATGATTGCTGGTTTTTTTTCGTCTAAAGAAAATAAAGTAGCTAA
AGTGAAATAAATAAAGAAAT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDVAVRNANDGISIAQTAEG
AMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLT
LGSMRSDTLAMGGFHYTSQNQLNKGWTVPEGGQTLTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDEN
GQLQLFTAGDLVSSAVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGFVDKERATLGAFQNRFDHAIN
NLNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSSTVLAQAKQAPDIALKLLG

Sequences:

>Translated_377_residues
MSVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDVAVRNANDGISIAQTAEG
AMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLT
LGSMRSDTLAMGGFHYTSQNQLNKGWTVPEGGQTLTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDEN
GQLQLFTAGDLVSSAVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGFVDKERATLGAFQNRFDHAIN
NLNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSSTVLAQAKQAPDIALKLLG
>Mature_376_residues
SVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSGLDVAVRNANDGISIAQTAEGA
MNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALNDELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTL
GSMRSDTLAMGGFHYTSQNQLNKGWTVPEGGQTLTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDENG
QLQLFTAGDLVSSAVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGFVDKERATLGAFQNRFDHAINN
LNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSSTVLAQAKQAPDIALKLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=218, Percent_Identity=39.9082568807339, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40191; Mature: 40060

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHCC
LDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALN
CEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQN
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCEEECCEEECCCC
QLNKGWTVPEGGQTLTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDEN
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCC
GQLQLFTAGDLVSSAVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGF
CCEEEEECHHHHHHHHHCCCCCEEHEEECHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH
VDKERATLGAFQNRFDHAINNLNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLAQAKQAPDIALKLLG
HHHHHHCCCCCEEEECC
>Mature Secondary Structure 
SVTVNTNVSAMTAQRYLNQATEHLNQSMERLSSGKRINSAKDDAAGLQISNRLKSQMSG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHHHCC
LDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLALQSSNGSNTLQDRQAIQEEADALN
CEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DELNRIAETTSFGGRRLLNGQFGTSTFQIGANAGEAVQLTLGSMRSDTLAMGGFHYTSQN
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCEEECCEEECCCC
QLNKGWTVPEGGQTLTMSFNDKNGKAQEITIEAKAGDDIEELATYINGQNDTVQASVDEN
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCC
GQLQLFTAGDLVSSAVTFGGSLSAELAIGGAVFDTVNDLDLTSVGGSQRAIATLDAAMGF
CCEEEEECHHHHHHHHHCCCCCEEHEEECHHHHHCCCCCEEECCCCCCHHHHHHHHHHHH
VDKERATLGAFQNRFDHAINNLNNIHENVAASNSRIEDTDFAKETVEMMKAQILQQVSST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VLAQAKQAPDIALKLLG
HHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10850984; 12620739 [H]