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The map label for this gene is ycgB [H]

Identifier: 59712381

GI number: 59712381

Start: 2001053

End: 2002570

Strand: Direct

Name: ycgB [H]

Synonym: VF_1774

Alternate gene names: 59712381

Gene position: 2001053-2002570 (Clockwise)

Preceding gene: 59712380

Following gene: 59712383

Centisome position: 69.06

GC content: 37.29

Gene sequence:

>1518_bases
ATGAAAAGGACGACAAAGCTACCTGATGGGCCAGATTGGACCTTTCAAATGCTTGAAGAATATCATGTAGAAATTAAGCG
TGTTGCCGAGCATTACCGTTTGGATACTTACCCAAACCAAATCGAGATCATCACAGCTGAACAAATGATGGATGCTTACT
CTAGTGTTGGTATGCCTATTAATTATCATCACTGGTCATTTGGTAAAAAATTCATCCAAACAGAACAAAACTATAAGCAT
GGTCAAATGGGACTCGCTTATGAAATCGTTATTAACTCCTCCCCTTGTATTGCCTATTTAATGGAAGAGAACACCATTAC
AATGCAAGCCTTAGTCATGGCACATGCTTGCTATGGTCATAACTCATTTTTTAAAGGTAATTACCTATTTCAAACTTGGA
CAGACGCCAGTTCGATTGTCGATTATTTATTGTTTGCACAGCAATACTTAACCAAGTGTGAAGAAAAATACGGTGTTGAT
GAAGTAGAAAAAATTCTCGATTCTTGTCATGCCTTAATGAACTATGGCGTAGATAGATATAAACGCCCTGAAAAAATCTC
AATAGCAGAAGAAAAAATTCGTCAAGAAGACAGAGAAGCCTATCTTCAATCTCAAGTAAATGACCTATGGCGAACCGTTC
CAAAATCAAAAGAAGAAAGTAACGAAGAAAAAATTCGCTTCCCATCAGAACCACAAGAAAACATTCTTTATTTTATTGAG
AAGCACGCCCCACTCCTTGAGTCATGGCAACGAGAGATTGTTCGGATTGTACGAAAAATTAGCCAGTACTTTTATCCACA
AAAACAAACCCAAGTAATGAATGAGGGTTGGGCAACCTTTTGGCACTATACGATCCTTAACCACCTTTATGACGAAGGGT
TAGTGTCTGAAAAGTTTATTCTAGAGTTCTTACACAGCCACACAAATGTTGTTGCTCAACCGAGTTATAACAGTCCTTAT
TACGGCGGAATTAATCCTTATGCTCTTGGTTTCGCTATGTTCCAAGATATTCGTAGAATATGTGAAGAACCGACAGATGA
AGACAGAGAGTGGTTTCCTGATTTAGCAGGAACCGATTGGTTAGATGCCGTACATTTTGCTATGCATAATTTTAAAGATG
AGAGTTTCATTAGCCAATACTTATCACCCAAGTTAATACGAGAGTTTAAACTGTTCTCCATCTTAGATAATGATAAAAAC
AAACATATTGAAGTCAGCGCAATTCATGATGATACAGGCTATCGTGAAATCAGAGAGAAGCTTGCTGCTCAATATAACTT
AAGTAACCTAGAGCCGAATATACAAGTATGGAATGTAGATGTACGAGGTGATCGTTCGATGATTCTACGCCATATTCCTC
ATAATCGTATTCCTTTAGATAAAAGCCATGAAGAAGTAATGAAGCATCTTCATCGTTTGTGGGGATTTGATGTGATTTTG
GAAGAAGTGATTTCATTTAATCGAGCAGAAATAATATCTTCTTGCCCGAAGCGTAATTACTACAATACGAGTATTTAA

Upstream 100 bases:

>100_bases
GGCTTTGATAATTTTGCCATGAAAAATATTCGTTCCGTTGAAGATATTTACCCAATATTCAGAGAATTATTTCAAAAGCA
GCTGGCTTAAGGAGGCAATG

Downstream 100 bases:

>100_bases
ATACTGAAATAGACATAACAAAAAGCCTTGAGGTATCACTACCTCAAGGCTTTATTATATCAATCTAATGCATTAATCAA
TTAAAGTGACGACAATGCTG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKRTTKLPDGPDWTFQMLEEYHVEIKRVAEHYRLDTYPNQIEIITAEQMMDAYSSVGMPINYHHWSFGKKFIQTEQNYKH
GQMGLAYEIVINSSPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFQTWTDASSIVDYLLFAQQYLTKCEEKYGVD
EVEKILDSCHALMNYGVDRYKRPEKISIAEEKIRQEDREAYLQSQVNDLWRTVPKSKEESNEEKIRFPSEPQENILYFIE
KHAPLLESWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVSEKFILEFLHSHTNVVAQPSYNSPY
YGGINPYALGFAMFQDIRRICEEPTDEDREWFPDLAGTDWLDAVHFAMHNFKDESFISQYLSPKLIREFKLFSILDNDKN
KHIEVSAIHDDTGYREIREKLAAQYNLSNLEPNIQVWNVDVRGDRSMILRHIPHNRIPLDKSHEEVMKHLHRLWGFDVIL
EEVISFNRAEIISSCPKRNYYNTSI

Sequences:

>Translated_505_residues
MKRTTKLPDGPDWTFQMLEEYHVEIKRVAEHYRLDTYPNQIEIITAEQMMDAYSSVGMPINYHHWSFGKKFIQTEQNYKH
GQMGLAYEIVINSSPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFQTWTDASSIVDYLLFAQQYLTKCEEKYGVD
EVEKILDSCHALMNYGVDRYKRPEKISIAEEKIRQEDREAYLQSQVNDLWRTVPKSKEESNEEKIRFPSEPQENILYFIE
KHAPLLESWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVSEKFILEFLHSHTNVVAQPSYNSPY
YGGINPYALGFAMFQDIRRICEEPTDEDREWFPDLAGTDWLDAVHFAMHNFKDESFISQYLSPKLIREFKLFSILDNDKN
KHIEVSAIHDDTGYREIREKLAAQYNLSNLEPNIQVWNVDVRGDRSMILRHIPHNRIPLDKSHEEVMKHLHRLWGFDVIL
EEVISFNRAEIISSCPKRNYYNTSI
>Mature_505_residues
MKRTTKLPDGPDWTFQMLEEYHVEIKRVAEHYRLDTYPNQIEIITAEQMMDAYSSVGMPINYHHWSFGKKFIQTEQNYKH
GQMGLAYEIVINSSPCIAYLMEENTITMQALVMAHACYGHNSFFKGNYLFQTWTDASSIVDYLLFAQQYLTKCEEKYGVD
EVEKILDSCHALMNYGVDRYKRPEKISIAEEKIRQEDREAYLQSQVNDLWRTVPKSKEESNEEKIRFPSEPQENILYFIE
KHAPLLESWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVSEKFILEFLHSHTNVVAQPSYNSPY
YGGINPYALGFAMFQDIRRICEEPTDEDREWFPDLAGTDWLDAVHFAMHNFKDESFISQYLSPKLIREFKLFSILDNDKN
KHIEVSAIHDDTGYREIREKLAAQYNLSNLEPNIQVWNVDVRGDRSMILRHIPHNRIPLDKSHEEVMKHLHRLWGFDVIL
EEVISFNRAEIISSCPKRNYYNTSI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=498, Percent_Identity=75.1004016064257, Blast_Score=827, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59861; Mature: 59861

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTTKLPDGPDWTFQMLEEYHVEIKRVAEHYRLDTYPNQIEIITAEQMMDAYSSVGMPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCC
NYHHWSFGKKFIQTEQNYKHGQMGLAYEIVINSSPCIAYLMEENTITMQALVMAHACYGH
CCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCC
NSFFKGNYLFQTWTDASSIVDYLLFAQQYLTKCEEKYGVDEVEKILDSCHALMNYGVDRY
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHH
KRPEKISIAEEKIRQEDREAYLQSQVNDLWRTVPKSKEESNEEKIRFPSEPQENILYFIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KHAPLLESWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVSEKFI
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEFLHSHTNVVAQPSYNSPYYGGINPYALGFAMFQDIRRICEEPTDEDREWFPDLAGTDW
HHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
LDAVHFAMHNFKDESFISQYLSPKLIREFKLFSILDNDKNKHIEVSAIHDDTGYREIREK
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH
LAAQYNLSNLEPNIQVWNVDVRGDRSMILRHIPHNRIPLDKSHEEVMKHLHRLWGFDVIL
HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EEVISFNRAEIISSCPKRNYYNTSI
HHHHCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRTTKLPDGPDWTFQMLEEYHVEIKRVAEHYRLDTYPNQIEIITAEQMMDAYSSVGMPI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCC
NYHHWSFGKKFIQTEQNYKHGQMGLAYEIVINSSPCIAYLMEENTITMQALVMAHACYGH
CCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCC
NSFFKGNYLFQTWTDASSIVDYLLFAQQYLTKCEEKYGVDEVEKILDSCHALMNYGVDRY
CCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHH
KRPEKISIAEEKIRQEDREAYLQSQVNDLWRTVPKSKEESNEEKIRFPSEPQENILYFIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KHAPLLESWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVSEKFI
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LEFLHSHTNVVAQPSYNSPYYGGINPYALGFAMFQDIRRICEEPTDEDREWFPDLAGTDW
HHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
LDAVHFAMHNFKDESFISQYLSPKLIREFKLFSILDNDKNKHIEVSAIHDDTGYREIREK
HHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHH
LAAQYNLSNLEPNIQVWNVDVRGDRSMILRHIPHNRIPLDKSHEEVMKHLHRLWGFDVIL
HHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
EEVISFNRAEIISSCPKRNYYNTSI
HHHHCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]