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The map label for this gene is 59712271

Identifier: 59712271

GI number: 59712271

Start: 1873277

End: 1873876

Strand: Direct

Name: 59712271

Synonym: VF_1664

Alternate gene names: NA

Gene position: 1873277-1873876 (Clockwise)

Preceding gene: 59712268

Following gene: 59712272

Centisome position: 64.65

GC content: 37.67

Gene sequence:

>600_bases
ATGGCGCGCAGAAACGACCATTCTCATCAAGAAATACGCGAAATGGCATTAGATAATGTTAAATTATTTCTTAATGAGCA
TAGTCATCACGAACTCAGTTTACGCAAACTGGCAAAAAGTATTGGTTATGTACCGAGTACATTAGTCAATATTTTTGGTA
GCTATAACTTATTACTGCTTCGCTCTATCGCACAAACCCTTGATGAATTAATGCTTCAAATCTCACAAGGTATTGAAAAC
AGTGCAACCCCTGAAGAGGCACTAAAAGCCATTGCTTATTGTTATTATGATTTTGCACAGCAGCAACCTAATCGTTGGAA
GTTGGTATTTCAACATAATATGAATGGTGAAGCCCTACCGGAATGGCAAGAAAACCGCATTAATCAAATGATGTCGATCC
TTGAAAGAATGATCTTCACCATTAACAGTACGAAAACTCACGAAGATATCGTAGAAACAAGTCGAGTTATCTGGGCTGGT
GTTCACGGCATAACCTTATTAAGTCTTGATGACCTACTTTTTTCAGCAACGCCGATTGATGGTCACAAACTTATTGATAA
TCTGCTGCTAAACTACATCAATCAATGGAAGCTTCATTAA

Upstream 100 bases:

>100_bases
CATGTGCACTAACTCCTAATTGACATAACTCTTACTTGAAGATTATAGCCATACATTTAAAATTAAGAACAATGTACATA
ATTTTATAGCTCAGGTTAAC

Downstream 100 bases:

>100_bases
GCGATATTCTTTGGTAAAAAGGATTTTTTATGGCAAAGCAAGCCAAACTACTCACACAGCGTCGATTCCTTCCCTACTTT
CTCACTCAATCTCTAGGGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; AcrR Transcriptional Regulator; HTH-Type Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVNIFGSYNLLLLRSIAQTLDELMLQISQGIEN
SATPEEALKAIAYCYYDFAQQQPNRWKLVFQHNMNGEALPEWQENRINQMMSILERMIFTINSTKTHEDIVETSRVIWAG
VHGITLLSLDDLLFSATPIDGHKLIDNLLLNYINQWKLH

Sequences:

>Translated_199_residues
MARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVNIFGSYNLLLLRSIAQTLDELMLQISQGIEN
SATPEEALKAIAYCYYDFAQQQPNRWKLVFQHNMNGEALPEWQENRINQMMSILERMIFTINSTKTHEDIVETSRVIWAG
VHGITLLSLDDLLFSATPIDGHKLIDNLLLNYINQWKLH
>Mature_198_residues
ARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVNIFGSYNLLLLRSIAQTLDELMLQISQGIENS
ATPEEALKAIAYCYYDFAQQQPNRWKLVFQHNMNGEALPEWQENRINQMMSILERMIFTINSTKTHEDIVETSRVIWAGV
HGITLLSLDDLLFSATPIDGHKLIDNLLLNYINQWKLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23067; Mature: 22936

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVNIFGSYNLLLL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
RSIAQTLDELMLQISQGIENSATPEEALKAIAYCYYDFAQQQPNRWKLVFQHNMNGEALP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
EWQENRINQMMSILERMIFTINSTKTHEDIVETSRVIWAGVHGITLLSLDDLLFSATPID
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHKLIDNLLLNYINQWKLH
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARRNDHSHQEIREMALDNVKLFLNEHSHHELSLRKLAKSIGYVPSTLVNIFGSYNLLLL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
RSIAQTLDELMLQISQGIENSATPEEALKAIAYCYYDFAQQQPNRWKLVFQHNMNGEALP
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
EWQENRINQMMSILERMIFTINSTKTHEDIVETSRVIWAGVHGITLLSLDDLLFSATPID
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHKLIDNLLLNYINQWKLH
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA