| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yeiW [C]
Identifier: 59712268
GI number: 59712268
Start: 1871511
End: 1871762
Strand: Direct
Name: yeiW [C]
Synonym: VF_1661
Alternate gene names: 59712268
Gene position: 1871511-1871762 (Clockwise)
Preceding gene: 59712265
Following gene: 59712271
Centisome position: 64.59
GC content: 42.06
Gene sequence:
>252_bases ATGGAATGTCGATTAGGTTGCGGTGCGTGTTGCATTGCCCCAAGTATTACGTCATTTATCCCGGGAATGCCAAATGGTAA ACCTGCTGGTGTTCGCTGTGTGCAATTAAATGAAGAGAATTTATGTAAGCTTTTTGGTAAGGCAGAACGCCCAAAGGTAT GTCATCAATTTAGTGCTTGTCCTGATGTATGCGGTTCAACCTCAGAACAAGCTATTCAAACCATCACTGAACTAGAGTCA ATGACGTTATAA
Upstream 100 bases:
>100_bases GAGGCCGTTTTATACCACTCTGTTCCAAAAAAGCAAGTTTTGACCTAAAGATAGAAGAGTGATACCTTGCGCATCCTTTA TTTTTTGCGTGAGTTTAATT
Downstream 100 bases:
>100_bases TTCTTTTATAGAAGAATACGCTTACGATAGTACACGAACAACGCTTTGTACTTGCTCTGCGATTTCAATGCCGTGGCTTG TTAAATAGCCACCATCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MECRLGCGACCIAPSITSFIPGMPNGKPAGVRCVQLNEENLCKLFGKAERPKVCHQFSACPDVCGSTSEQAIQTITELES MTL
Sequences:
>Translated_83_residues MECRLGCGACCIAPSITSFIPGMPNGKPAGVRCVQLNEENLCKLFGKAERPKVCHQFSACPDVCGSTSEQAIQTITELES MTL >Mature_83_residues MECRLGCGACCIAPSITSFIPGMPNGKPAGVRCVQLNEENLCKLFGKAERPKVCHQFSACPDVCGSTSEQAIQTITELES MTL
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=53.6585365853659, Blast_Score=96, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 8851; Mature: 8851
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 14.5 %Cys+Met (Translated Protein) 10.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 14.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECRLGCGACCIAPSITSFIPGMPNGKPAGVRCVQLNEENLCKLFGKAERPKVCHQFSAC CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHCC PDVCGSTSEQAIQTITELESMTL CHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MECRLGCGACCIAPSITSFIPGMPNGKPAGVRCVQLNEENLCKLFGKAERPKVCHQFSAC CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCHHHHHHHCC PDVCGSTSEQAIQTITELESMTL CHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]