| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712126
Identifier: 59712126
GI number: 59712126
Start: 1697712
End: 1698185
Strand: Reverse
Name: 59712126
Synonym: VF_1519
Alternate gene names: NA
Gene position: 1698185-1697712 (Counterclockwise)
Preceding gene: 59712128
Following gene: 172087714
Centisome position: 58.61
GC content: 34.81
Gene sequence:
>474_bases ATGAGCTATTTACCTTTAGATGAATACAATCGCAAGTGGATTTTTACTCATCAATCAATGCCGGTTGATGATGCCTTGCT ACCATTAATAAAACCATTCACTCAAGCAAAATCAGCTCAAGTTTGGAATGACTTTATCAGCAGCAATAGCCCAACCGCGG ATCATTTTGGCTCGAAAGAGTGGCCAATGAAGAAAAGTTCGTGGACAAATGAAATTGATTGGCAACATCGTTGGGACAGC GATAATGAATCATTACCTGAAGAAGTGTTGGAATTTATCGATTGGTCTGATGAAGTAACCGTTTATTTTTGTTATGAGAA ATATAACTTAATTGAAACTTCATGGGGAACGTTTAAGAAAACATGGAAGAACTTCTTATTTTATGATGATTTACCATTAT TAATTGGTAAGAAGAAATCACAAGTCTTATGGTTTAACTCTAAAGGTAAAGTGAAATTAGGAACAAGAAGTTAG
Upstream 100 bases:
>100_bases GGAGGATGATAAAAATCAAGCTATTGTTAGATATTCTTATTTGGGCTTAATAAAAAAAGACGATAGAATAGAGCTACATG CCTTACTATAGAAAGAGTTT
Downstream 100 bases:
>100_bases GCTAGATTCGCCATTTTATGTAAAAGAAAAGCTCATTGTGAAAGCAATGAGCTTTTTTATATGTCATACCCGATTAATTG AAATTATGTGTTCGGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSYLPLDEYNRKWIFTHQSMPVDDALLPLIKPFTQAKSAQVWNDFISSNSPTADHFGSKEWPMKKSSWTNEIDWQHRWDS DNESLPEEVLEFIDWSDEVTVYFCYEKYNLIETSWGTFKKTWKNFLFYDDLPLLIGKKKSQVLWFNSKGKVKLGTRS
Sequences:
>Translated_157_residues MSYLPLDEYNRKWIFTHQSMPVDDALLPLIKPFTQAKSAQVWNDFISSNSPTADHFGSKEWPMKKSSWTNEIDWQHRWDS DNESLPEEVLEFIDWSDEVTVYFCYEKYNLIETSWGTFKKTWKNFLFYDDLPLLIGKKKSQVLWFNSKGKVKLGTRS >Mature_156_residues SYLPLDEYNRKWIFTHQSMPVDDALLPLIKPFTQAKSAQVWNDFISSNSPTADHFGSKEWPMKKSSWTNEIDWQHRWDSD NESLPEEVLEFIDWSDEVTVYFCYEKYNLIETSWGTFKKTWKNFLFYDDLPLLIGKKKSQVLWFNSKGKVKLGTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18704; Mature: 18573
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLPLDEYNRKWIFTHQSMPVDDALLPLIKPFTQAKSAQVWNDFISSNSPTADHFGSKE CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC WPMKKSSWTNEIDWQHRWDSDNESLPEEVLEFIDWSDEVTVYFCYEKYNLIETSWGTFKK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHH TWKNFLFYDDLPLLIGKKKSQVLWFNSKGKVKLGTRS HHHHCEEECCCCCEECCCCCEEEEECCCCCEEECCCC >Mature Secondary Structure SYLPLDEYNRKWIFTHQSMPVDDALLPLIKPFTQAKSAQVWNDFISSNSPTADHFGSKE CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC WPMKKSSWTNEIDWQHRWDSDNESLPEEVLEFIDWSDEVTVYFCYEKYNLIETSWGTFKK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCHHHHH TWKNFLFYDDLPLLIGKKKSQVLWFNSKGKVKLGTRS HHHHCEEECCCCCEECCCCCEEEEECCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA