| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712085
Identifier: 59712085
GI number: 59712085
Start: 1636424
End: 1636594
Strand: Direct
Name: 59712085
Synonym: VF_1478
Alternate gene names: NA
Gene position: 1636424-1636594 (Clockwise)
Preceding gene: 59712084
Following gene: 59712088
Centisome position: 56.48
GC content: 39.18
Gene sequence:
>171_bases ATGTTTAATTTAGAAGGTTATTGTGACTGGTGTCGAAAGCCAGCGATGGTTCTACAACATCAATACTGCGACGGTGCAAA ATATTACGCCTGTGAACACTGCAACGATTACGCAAAAATCGATATCAGGCAGTATGATTTAGCAGAAATGGAAAAGATGA ACCAGAAGTAA
Upstream 100 bases:
>100_bases TTCTTGTTCGGTATACTTCGCACCACTTTTATATGTTATCAAAATGTAACAACAATAATTTAACGTATAAATCTTAATAG AATAAAGAGAAAGAAGTCTT
Downstream 100 bases:
>100_bases AAATAAAAATGCCGATGACGTTAATCATCGGCATTTTTGTATGTGTTTATAATGAAACAGCGATTATGATTCTTTCGCCA TTACTTTATAGATAAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MFNLEGYCDWCRKPAMVLQHQYCDGAKYYACEHCNDYAKIDIRQYDLAEMEKMNQK
Sequences:
>Translated_56_residues MFNLEGYCDWCRKPAMVLQHQYCDGAKYYACEHCNDYAKIDIRQYDLAEMEKMNQK >Mature_56_residues MFNLEGYCDWCRKPAMVLQHQYCDGAKYYACEHCNDYAKIDIRQYDLAEMEKMNQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6777; Mature: 6777
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 16.1 %Cys+Met (Translated Protein) 8.9 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 16.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNLEGYCDWCRKPAMVLQHQYCDGAKYYACEHCNDYAKIDIRQYDLAEMEKMNQK CCCCCCHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHCCC >Mature Secondary Structure MFNLEGYCDWCRKPAMVLQHQYCDGAKYYACEHCNDYAKIDIRQYDLAEMEKMNQK CCCCCCHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA