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The map label for this gene is ybeQ [H]

Identifier: 59712084

GI number: 59712084

Start: 1635301

End: 1636287

Strand: Direct

Name: ybeQ [H]

Synonym: VF_1477

Alternate gene names: 59712084

Gene position: 1635301-1636287 (Clockwise)

Preceding gene: 59712083

Following gene: 59712085

Centisome position: 56.44

GC content: 39.61

Gene sequence:

>987_bases
ATGATCCGTTCTGTTTTACTTGCTGTTGTTCTACTTTTTAGTTTCGCCGTTCATGCTGATTCTCTTGAAGATAAAGCGGA
ATCTGGTGATGCTCGTGCTCAATTAAAATTAGCAATGGAATACGAATCAGGTACTAACCGTCCTAAGAACATCGATTATT
CTATTCAGTGGTATAAACAAGCAGCGATGCAAGACCTTACCTCTGCGCAGTTTAACCTTGGGCAAATTTACAAAAATGGT
TACGGGGTTGCTCAAGACATTAAACAAGCCATTTATTGGTTTACGCGTGCAGCTACGCAAAACCACCCACCTTCACAATT
CTATTTAGGTGAGATTTACGAATACGGCCTTTCTGGTTCTGTTGATTTATATAACGCGTCTTTGTGGTACCAAATTGCGT
CTCATAATGGTCATGGCGAAGCTATGCTTGGTTATGAGCGTGTACTTCAAGAAATTAAAGCGCAGCAAAAAGAAGAACAA
CTGAAATCAGCACAACAGCCTGAAGAGCCGAAAGTTGTCGAGCCAGAGCCAAAAACCATCATCATCACTCAGATGGAAAA
ACCAACGGCTCTAATTACTTTTGGCAGCTACCTGTTAATCGCCATTATGATTGTGGTGTTAGTTTTCTTAGTTTTACGTC
TTAAACAGAGCATGAAACGAGCTAAAAATGACGATCCACTTAAAACCAGTTTCGCTAAATCATTACAAAATGAAAAAATG
AAGCAGCTGCAAGACAGTAATGACAAATTAAAGATCCGTGCAGATGCTCAAGAAGCCACAATTAAAAGACTAACTATTGA
GCTAGATGGTAAGAAACCACTTTCACAGTTTACGCCACATCAATTATTAGGGGTAACTGTTGCCAGTGAGAGCAGCGAAA
TTAAAAAACAATACCGAAAACTGGCTCAACTCCATCACCCTGACCACGGTGCAGATGGTGTGATGCTTGCTGAAATTAAT
AAGGCTTATAATTCAATTAAACGATAA

Upstream 100 bases:

>100_bases
TCATCGTTACATCTCTTCTTATCTCTCCTTTTATCTTTACTTTTCTATCCCCCTCTCGCTACACTGTCGCCGCCTTTTTA
TTGTTAATAATTTTATATTT

Downstream 100 bases:

>100_bases
CGTACACGGAATACGAGACTTAGACTTTACATATCATTCTTGTTCGGTATACTTCGCACCACTTTTATATGTTATCAAAA
TGTAACAACAATAATTTAAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MIRSVLLAVVLLFSFAVHADSLEDKAESGDARAQLKLAMEYESGTNRPKNIDYSIQWYKQAAMQDLTSAQFNLGQIYKNG
YGVAQDIKQAIYWFTRAATQNHPPSQFYLGEIYEYGLSGSVDLYNASLWYQIASHNGHGEAMLGYERVLQEIKAQQKEEQ
LKSAQQPEEPKVVEPEPKTIIITQMEKPTALITFGSYLLIAIMIVVLVFLVLRLKQSMKRAKNDDPLKTSFAKSLQNEKM
KQLQDSNDKLKIRADAQEATIKRLTIELDGKKPLSQFTPHQLLGVTVASESSEIKKQYRKLAQLHHPDHGADGVMLAEIN
KAYNSIKR

Sequences:

>Translated_328_residues
MIRSVLLAVVLLFSFAVHADSLEDKAESGDARAQLKLAMEYESGTNRPKNIDYSIQWYKQAAMQDLTSAQFNLGQIYKNG
YGVAQDIKQAIYWFTRAATQNHPPSQFYLGEIYEYGLSGSVDLYNASLWYQIASHNGHGEAMLGYERVLQEIKAQQKEEQ
LKSAQQPEEPKVVEPEPKTIIITQMEKPTALITFGSYLLIAIMIVVLVFLVLRLKQSMKRAKNDDPLKTSFAKSLQNEKM
KQLQDSNDKLKIRADAQEATIKRLTIELDGKKPLSQFTPHQLLGVTVASESSEIKKQYRKLAQLHHPDHGADGVMLAEIN
KAYNSIKR
>Mature_328_residues
MIRSVLLAVVLLFSFAVHADSLEDKAESGDARAQLKLAMEYESGTNRPKNIDYSIQWYKQAAMQDLTSAQFNLGQIYKNG
YGVAQDIKQAIYWFTRAATQNHPPSQFYLGEIYEYGLSGSVDLYNASLWYQIASHNGHGEAMLGYERVLQEIKAQQKEEQ
LKSAQQPEEPKVVEPEPKTIIITQMEKPTALITFGSYLLIAIMIVVLVFLVLRLKQSMKRAKNDDPLKTSFAKSLQNEKM
KQLQDSNDKLKIRADAQEATIKRLTIELDGKKPLSQFTPHQLLGVTVASESSEIKKQYRKLAQLHHPDHGADGVMLAEIN
KAYNSIKR

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=98, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786867, Length=134, Percent_Identity=32.089552238806, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37093; Mature: 37093

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSVLLAVVLLFSFAVHADSLEDKAESGDARAQLKLAMEYESGTNRPKNIDYSIQWYKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH
AAMQDLTSAQFNLGQIYKNGYGVAQDIKQAIYWFTRAATQNHPPSQFYLGEIYEYGLSGS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
VDLYNASLWYQIASHNGHGEAMLGYERVLQEIKAQQKEEQLKSAQQPEEPKVVEPEPKTI
EEEEEHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IITQMEKPTALITFGSYLLIAIMIVVLVFLVLRLKQSMKRAKNDDPLKTSFAKSLQNEKM
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KQLQDSNDKLKIRADAQEATIKRLTIELDGKKPLSQFTPHQLLGVTVASESSEIKKQYRK
HHHHCCCCEEEEEECHHHHHEEEEEEEECCCCCHHHCCCHHHHEEEECCCHHHHHHHHHH
LAQLHHPDHGADGVMLAEINKAYNSIKR
HHHHCCCCCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MIRSVLLAVVLLFSFAVHADSLEDKAESGDARAQLKLAMEYESGTNRPKNIDYSIQWYKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHH
AAMQDLTSAQFNLGQIYKNGYGVAQDIKQAIYWFTRAATQNHPPSQFYLGEIYEYGLSGS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
VDLYNASLWYQIASHNGHGEAMLGYERVLQEIKAQQKEEQLKSAQQPEEPKVVEPEPKTI
EEEEEHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
IITQMEKPTALITFGSYLLIAIMIVVLVFLVLRLKQSMKRAKNDDPLKTSFAKSLQNEKM
EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KQLQDSNDKLKIRADAQEATIKRLTIELDGKKPLSQFTPHQLLGVTVASESSEIKKQYRK
HHHHCCCCEEEEEECHHHHHEEEEEEEECCCCCHHHCCCHHHHEEEECCCHHHHHHHHHH
LAQLHHPDHGADGVMLAEINKAYNSIKR
HHHHCCCCCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]