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The map label for this gene is ytcJ [H]

Identifier: 59712083

GI number: 59712083

Start: 1633456

End: 1635141

Strand: Direct

Name: ytcJ [H]

Synonym: VF_1476

Alternate gene names: 59712083

Gene position: 1633456-1635141 (Clockwise)

Preceding gene: 59712081

Following gene: 59712084

Centisome position: 56.37

GC content: 42.05

Gene sequence:

>1686_bases
ATGAAGACGTTCCCATTAAGTTTATTAGCAGGCTTTCTTGTTTCACCTTTTGTATTAGCTTCTCCTGACCTGATTTTTAC
CAATGGTGACGTTATTACCGTGACGGGTGAATCTGATCGCGCTGAAGCCGTTGCAATAAAAGATGGCATCATTGTCGCTG
TTGGCAATAACCAAGAGATCCTTAATCAAAAAGGCACCAATACCCAAATCAGAGATTTAAAAGGCAAAACTCTTGCGCCA
GGGTTTATCGACAGTCACGGCCATTTTGCTCAATATCTTCCTTTAATTGAAAGTCCGTTCCTTTACCCTGCCCCAATGGG
AGAGGTAAACTCGTTTGATGACATTAAACAGATAATGACGGACTACTTTAATCAACCAAATCTTGATACCAACAGCCTTC
ATGTGGCTTTTGGTTATGACGATGCCGAGCTAAAAGAAAAACAACATCCTACTAAACAGTTCTTTGATACCTTCAGTAAA
GAATACCCTTTCTGTGCTGTGCATATATCAGGACACCTTGCGAGTTGTAACAGCAAAGGGCTCGATTTCATTGGATTCAC
TAAGCAAAGCACGAACCCAGATGGTGGCGTATTGCGTCGTGATAATAATGGCGAACTCACTGGCGTTTTAGAAGAGTCTG
CAATTTATCCGATTTTAGGAAACCTTCCTGAAATGACGCAAGAAGATGCTATCCGCCGTTTTGGTAAGGTTCAGGATTTA
TACGCCGGTTATGGCATTACCACCACACAAGAAGGTTTAGCAACGCTTCCGGCGCTTAATGCGATGAAAACCATGGCAGA
GCAAGATTTATTAAAAATTGACCTACTTGCTTATGCAAAATGGGTGGATTTAAAAGAAGCGGTAAAAGTCATGCCAATAA
AATCATCCATTAATGGTTTAACACTCGCAGGGGTTAAAATGGTTGGTGATGGTTCACCACAAGGGAAAACCGCTTACCTT
TCTACTCCCTATTTTGAGCCACCACACAGCCACGCTTATGATTACCACGGCTACCCAGTGTTAACCCAAGAGGAGATGAA
CCAATGGGTAGATACCGCCTATCAAATGAATGCTCAGATCCTAAGCCACAGTAACGGCGATGCGTCGGCAGATATTCTAT
TAAATGCGGTAGAACTTGCTGATGCGAAATATGGCAAAGAAGATCGTCGAACTGTGGTGATCCATGCTCAAACCACACGT
TTAGACCAGATAAAACGCATGAAGAAAAATGAGATGATCCCTTCTTTCTTCCCTACTCACACCTTCTTCTGGGGAGATTG
GCATCGTGATTCCGTGTTAGGCCCTTGGCGTGCATCCAATATCTCACCTATGGGTTGGGCAAATTCAAATGATCTGATGT
TTACCATTCACATGGACGCACCCGTACTATTTCCTGACATGATGACCAATATGTGGAGTGCAGTAAATCGTGTAACACGC
AGTAATCAAACCTTAGGTGAGCATCATAAAATCACGCCATATCAAGCGTTAGAAGCGATAACCATTAATGCGGCGTATCA
GAACTTTGAAGAGAAAAGCAAAGGGTCTATTGAGGTTGGAAAACGTGCCGACTTGGTGATCTTAAATAATAACCTACTTG
ACGTTGACCCAATGAAGATAAAAGACATTCCGATTTTAGAAACGATTAAAGATGGAAAAACAATATACGTAAACCAATCA
CTATAA

Upstream 100 bases:

>100_bases
CCCAACTTGTTAGGCATACCCTATCATAATCGATTTCTTTGTTTTGGTATTCCATGAAAAAATCCTACTCAGTTCATAGT
TTAAAATTTGAGAGGACATT

Downstream 100 bases:

>100_bases
AAAGAAAATAACAACAAAGAAGCAGCTAAGGTTGGCTGCTTTTTTGTAAATCTGCAAATTCATCGTTACATCTCTTCTTA
TCTCTCCTTTTATCTTTACT

Product: exoenzyme regulatory protein AepA precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKTFPLSLLAGFLVSPFVLASPDLIFTNGDVITVTGESDRAEAVAIKDGIIVAVGNNQEILNQKGTNTQIRDLKGKTLAP
GFIDSHGHFAQYLPLIESPFLYPAPMGEVNSFDDIKQIMTDYFNQPNLDTNSLHVAFGYDDAELKEKQHPTKQFFDTFSK
EYPFCAVHISGHLASCNSKGLDFIGFTKQSTNPDGGVLRRDNNGELTGVLEESAIYPILGNLPEMTQEDAIRRFGKVQDL
YAGYGITTTQEGLATLPALNAMKTMAEQDLLKIDLLAYAKWVDLKEAVKVMPIKSSINGLTLAGVKMVGDGSPQGKTAYL
STPYFEPPHSHAYDYHGYPVLTQEEMNQWVDTAYQMNAQILSHSNGDASADILLNAVELADAKYGKEDRRTVVIHAQTTR
LDQIKRMKKNEMIPSFFPTHTFFWGDWHRDSVLGPWRASNISPMGWANSNDLMFTIHMDAPVLFPDMMTNMWSAVNRVTR
SNQTLGEHHKITPYQALEAITINAAYQNFEEKSKGSIEVGKRADLVILNNNLLDVDPMKIKDIPILETIKDGKTIYVNQS
L

Sequences:

>Translated_561_residues
MKTFPLSLLAGFLVSPFVLASPDLIFTNGDVITVTGESDRAEAVAIKDGIIVAVGNNQEILNQKGTNTQIRDLKGKTLAP
GFIDSHGHFAQYLPLIESPFLYPAPMGEVNSFDDIKQIMTDYFNQPNLDTNSLHVAFGYDDAELKEKQHPTKQFFDTFSK
EYPFCAVHISGHLASCNSKGLDFIGFTKQSTNPDGGVLRRDNNGELTGVLEESAIYPILGNLPEMTQEDAIRRFGKVQDL
YAGYGITTTQEGLATLPALNAMKTMAEQDLLKIDLLAYAKWVDLKEAVKVMPIKSSINGLTLAGVKMVGDGSPQGKTAYL
STPYFEPPHSHAYDYHGYPVLTQEEMNQWVDTAYQMNAQILSHSNGDASADILLNAVELADAKYGKEDRRTVVIHAQTTR
LDQIKRMKKNEMIPSFFPTHTFFWGDWHRDSVLGPWRASNISPMGWANSNDLMFTIHMDAPVLFPDMMTNMWSAVNRVTR
SNQTLGEHHKITPYQALEAITINAAYQNFEEKSKGSIEVGKRADLVILNNNLLDVDPMKIKDIPILETIKDGKTIYVNQS
L
>Mature_561_residues
MKTFPLSLLAGFLVSPFVLASPDLIFTNGDVITVTGESDRAEAVAIKDGIIVAVGNNQEILNQKGTNTQIRDLKGKTLAP
GFIDSHGHFAQYLPLIESPFLYPAPMGEVNSFDDIKQIMTDYFNQPNLDTNSLHVAFGYDDAELKEKQHPTKQFFDTFSK
EYPFCAVHISGHLASCNSKGLDFIGFTKQSTNPDGGVLRRDNNGELTGVLEESAIYPILGNLPEMTQEDAIRRFGKVQDL
YAGYGITTTQEGLATLPALNAMKTMAEQDLLKIDLLAYAKWVDLKEAVKVMPIKSSINGLTLAGVKMVGDGSPQGKTAYL
STPYFEPPHSHAYDYHGYPVLTQEEMNQWVDTAYQMNAQILSHSNGDASADILLNAVELADAKYGKEDRRTVVIHAQTTR
LDQIKRMKKNEMIPSFFPTHTFFWGDWHRDSVLGPWRASNISPMGWANSNDLMFTIHMDAPVLFPDMMTNMWSAVNRVTR
SNQTLGEHHKITPYQALEAITINAAYQNFEEKSKGSIEVGKRADLVILNNNLLDVDPMKIKDIPILETIKDGKTIYVNQS
L

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 62438; Mature: 62438

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPLSLLAGFLVSPFVLASPDLIFTNGDVITVTGESDRAEAVAIKDGIIVAVGNNQEI
CCCCCHHHHHHHHHCCHHHCCCCEEEECCCEEEEECCCCCCEEEEEECCEEEEECCCHHH
LNQKGTNTQIRDLKGKTLAPGFIDSHGHFAQYLPLIESPFLYPAPMGEVNSFDDIKQIMT
HCCCCCCCEEHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
DYFNQPNLDTNSLHVAFGYDDAELKEKQHPTKQFFDTFSKEYPFCAVHISGHLASCNSKG
HHCCCCCCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCC
LDFIGFTKQSTNPDGGVLRRDNNGELTGVLEESAIYPILGNLPEMTQEDAIRRFGKVQDL
CEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCHHHH
YAGYGITTTQEGLATLPALNAMKTMAEQDLLKIDLLAYAKWVDLKEAVKVMPIKSSINGL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCCE
TLAGVKMVGDGSPQGKTAYLSTPYFEPPHSHAYDYHGYPVLTQEEMNQWVDTAYQMNAQI
EEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHE
LSHSNGDASADILLNAVELADAKYGKEDRRTVVIHAQTTRLDQIKRMKKNEMIPSFFPTH
EECCCCCCCHHHHEEHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
TFFWGDWHRDSVLGPWRASNISPMGWANSNDLMFTIHMDAPVLFPDMMTNMWSAVNRVTR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHH
SNQTLGEHHKITPYQALEAITINAAYQNFEEKSKGSIEVGKRADLVILNNNLLDVDPMKI
CCCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHCCCCEEECCCCCEEEEECCEEECCCCEE
KDIPILETIKDGKTIYVNQSL
CCCCHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MKTFPLSLLAGFLVSPFVLASPDLIFTNGDVITVTGESDRAEAVAIKDGIIVAVGNNQEI
CCCCCHHHHHHHHHCCHHHCCCCEEEECCCEEEEECCCCCCEEEEEECCEEEEECCCHHH
LNQKGTNTQIRDLKGKTLAPGFIDSHGHFAQYLPLIESPFLYPAPMGEVNSFDDIKQIMT
HCCCCCCCEEHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
DYFNQPNLDTNSLHVAFGYDDAELKEKQHPTKQFFDTFSKEYPFCAVHISGHLASCNSKG
HHCCCCCCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCEEECCCCCC
LDFIGFTKQSTNPDGGVLRRDNNGELTGVLEESAIYPILGNLPEMTQEDAIRRFGKVQDL
CEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCHHHH
YAGYGITTTQEGLATLPALNAMKTMAEQDLLKIDLLAYAKWVDLKEAVKVMPIKSSINGL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEEECCCCCCE
TLAGVKMVGDGSPQGKTAYLSTPYFEPPHSHAYDYHGYPVLTQEEMNQWVDTAYQMNAQI
EEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHE
LSHSNGDASADILLNAVELADAKYGKEDRRTVVIHAQTTRLDQIKRMKKNEMIPSFFPTH
EECCCCCCCHHHHEEHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCC
TFFWGDWHRDSVLGPWRASNISPMGWANSNDLMFTIHMDAPVLFPDMMTNMWSAVNRVTR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHHHHHH
SNQTLGEHHKITPYQALEAITINAAYQNFEEKSKGSIEVGKRADLVILNNNLLDVDPMKI
CCCCCCCCCCCCHHHHHHEEEEEHHHHHHHHHCCCCEEECCCCCEEEEECCEEECCCCEE
KDIPILETIKDGKTIYVNQSL
CCCCHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]