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The map label for this gene is 59712081

Identifier: 59712081

GI number: 59712081

Start: 1631924

End: 1632475

Strand: Direct

Name: 59712081

Synonym: VF_1474

Alternate gene names: NA

Gene position: 1631924-1632475 (Clockwise)

Preceding gene: 59712080

Following gene: 59712083

Centisome position: 56.32

GC content: 38.77

Gene sequence:

>552_bases
ATGAATGACCAATATCTTGAAATTATTGAATTTACACAGCCTAACGAGCATCAAAAATGGTTAGCCATAAATGACAACGT
AATGGGTGGTATTTCCATTGGCCAACTTCACTACGATGGAAATACATGCCGATTTCAAGGTGAATTATCATTAGAAAACA
ATGGTGGTTTCAGCTCAATCAAGCGCTCTATTGAATCTCTATCTAAAGAGGTAAACGCAATAGAACTCATGTTTACGGGT
GATGGGCATACCTATCAATTAAGACTTACCACATGGAAGAATGGTGATCGCATTCAATACAAACACGATTTTGCCACCAC
TAAAGGAAAGCAGCAGAAAAAGACATTTCACTTACACAATTTTCAAGCTGTTTTTAGAGGGCGATTACTTAATCACGCTC
CTGAACTCGTGGCGAACGATATCAAGCAAGTTGGCTTTCTCATTGCGAATAAACAAACATCACCCTTCGCTCTAGGTTTG
ACTCAAATTCAATTTAAAGCAATCAACAACGCTCCAACGCCTCAGTCCATTCTTCAATCCACTCGAGAATAA

Upstream 100 bases:

>100_bases
TCACTTAAAATCGAATTCGACAAATCATCAAACTACTCTGATTTCACCAACCAATGTTTAGCAATGATCACAGCAAATCA
TAGTGTAAAGGAAAGTTAAG

Downstream 100 bases:

>100_bases
ACCCAAACACTTCTGCATCTGGTTTTCCATAACAATAAAAAGCATTGAGGCCAAAAGAAAGATTGTTCCCAAGCTCTTTC
AAATTGAGATCGACAAGTTC

Product: putative exonuclease

Products: NA

Alternate protein names: Exonuclease

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNDQYLEIIEFTQPNEHQKWLAINDNVMGGISIGQLHYDGNTCRFQGELSLENNGGFSSIKRSIESLSKEVNAIELMFTG
DGHTYQLRLTTWKNGDRIQYKHDFATTKGKQQKKTFHLHNFQAVFRGRLLNHAPELVANDIKQVGFLIANKQTSPFALGL
TQIQFKAINNAPTPQSILQSTRE

Sequences:

>Translated_183_residues
MNDQYLEIIEFTQPNEHQKWLAINDNVMGGISIGQLHYDGNTCRFQGELSLENNGGFSSIKRSIESLSKEVNAIELMFTG
DGHTYQLRLTTWKNGDRIQYKHDFATTKGKQQKKTFHLHNFQAVFRGRLLNHAPELVANDIKQVGFLIANKQTSPFALGL
TQIQFKAINNAPTPQSILQSTRE
>Mature_183_residues
MNDQYLEIIEFTQPNEHQKWLAINDNVMGGISIGQLHYDGNTCRFQGELSLENNGGFSSIKRSIESLSKEVNAIELMFTG
DGHTYQLRLTTWKNGDRIQYKHDFATTKGKQQKKTFHLHNFQAVFRGRLLNHAPELVANDIKQVGFLIANKQTSPFALGL
TQIQFKAINNAPTPQSILQSTRE

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20793; Mature: 20793

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQYLEIIEFTQPNEHQKWLAINDNVMGGISIGQLHYDGNTCRFQGELSLENNGGFSSI
CCCCEEEEEECCCCCCCCEEEEECCCEECCEEEEEEEECCCEEEEEEEEEEECCCCHHHH
KRSIESLSKEVNAIELMFTGDGHTYQLRLTTWKNGDRIQYKHDFATTKGKQQKKTFHLHN
HHHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHEEEHHH
FQAVFRGRLLNHAPELVANDIKQVGFLIANKQTSPFALGLTQIQFKAINNAPTPQSILQS
HHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHH
TRE
HCC
>Mature Secondary Structure
MNDQYLEIIEFTQPNEHQKWLAINDNVMGGISIGQLHYDGNTCRFQGELSLENNGGFSSI
CCCCEEEEEECCCCCCCCEEEEECCCEECCEEEEEEEECCCEEEEEEEEEEECCCCHHHH
KRSIESLSKEVNAIELMFTGDGHTYQLRLTTWKNGDRIQYKHDFATTKGKQQKKTFHLHN
HHHHHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHEEEHHH
FQAVFRGRLLNHAPELVANDIKQVGFLIANKQTSPFALGLTQIQFKAINNAPTPQSILQS
HHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHH
TRE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA