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The map label for this gene is dedA [C]

Identifier: 59712005

GI number: 59712005

Start: 1545822

End: 1547099

Strand: Reverse

Name: dedA [C]

Synonym: VF_1398

Alternate gene names: 59712005

Gene position: 1547099-1545822 (Counterclockwise)

Preceding gene: 59712006

Following gene: 59712001

Centisome position: 53.39

GC content: 37.87

Gene sequence:

>1278_bases
ATGTTTGATACGATGACTTTGTTTTGGGGCGCATTATTTGATGCGCTCATAGGACCTAATGTATTTGTTCCTGGGGAACC
TTTTTTAATTGCAGCAGGCTTTCGGCTTCATCAAGGTATTTGGAGTGGCGTTGTTGCTGTCATTTTAGGCGGTTTTTTAG
GCGATCAAATTAGCTATGTTATTGGTCGCCGATTTGGACGAAATGCTCAATCATGGTTAATGAGGTGGCTGCCAAAAACA
CGACGTCCTATCGCTCGTTGCCGTTTGCTATTGCAAAAGAGAGGAACTATCGTTCTTGTTTTTTCTCGCTTGTTAGGACC
TGTAGCGTGGATAGTTCCTTTTATCGCTGGTGTTAATCATATTGCTTGGGGGAGATTTACATTATTGACTTCTATTGGTT
TGCTACTCGGTGTTACTCAATTTGTTCTATGGGGATATTTATTATCTTATGGCATTGATACGCTACCATTGCTAAAAGAA
GCTGAGCTTTTTGTTGTAGAACATATACAGTCTATTCTGATGCTGGTTTTCTTGAGTGTTTTTTTGTTCATAGCTAAACG
TTATCGATGGCGCAGACTCGGATTAAAATTCACCTTTGCTCTTATAGCGGCAGTGGCTTATTTAAATTACAGTCATTTTT
TTTGGTCGGCCGATGACTTAATCAAAGATGTTAAGGCTAACCCTTTGTATTTTGATGAAACACGCACCGTATTCAAAGCA
TTCCCTGGAGAGTCGTCTTTTTTTGATGCACAAGCAATTAACGTTGTATTTATCGGTAACAATCCTCAGACGATAATGAA
TCAACTTGGGTGGATTGAAAACAAAACATTTTCAAGAAATGATATTAATTTAGTCGATTATTTTTTACTTATGAGGAATA
AGACGCCACCAGTATCCGATCTGTTTTGGAATGGGCGAGTTCAAGATATGGCTTTTCAATTACCAGGAAATTTATTAAAA
CGAAGTCATATCCGTTGGTGGAATGCTGGAAGAAATAGCGGGGAACAACAGGTTTGGTTAGGGGCGTTAAGTTATGATGA
TGGTCTGACCTTTACTCCATATCGAGGAATAGTAACTATGCTGCACAGCATTGATTCAGATGTAGATAAAGAAAGAGATA
AATTTAAAAGAACGATCGATTTATTTTCGAACAATCTATTTACATCGAAACAAGCTTATTCAGCACCTGTGAGTAAAGAT
GAAGAGCATGATTATTATTCTGATGGAGAGATATTGGTTATCAGTACTCGTACGTTACCTATTGGTAATAATGGATAA

Upstream 100 bases:

>100_bases
ATGTTCGCCGTTTCTTGTTTGGAGAAATGCGCAATAACGAAATGGAATATAAGTTCGGACATTATTCAAATCAAAAGTAA
TTTATACGTAAAGGTAAATT

Downstream 100 bases:

>100_bases
CGTACGAGGTTATTTATTGTTAATTAGTCACCAGTGGAAAGGTGAGGGTTGCTTTTAAGCCGCCCATTTTACTTCTATCT
AAAAGCAATGAACCGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein-Related Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MFDTMTLFWGALFDALIGPNVFVPGEPFLIAAGFRLHQGIWSGVVAVILGGFLGDQISYVIGRRFGRNAQSWLMRWLPKT
RRPIARCRLLLQKRGTIVLVFSRLLGPVAWIVPFIAGVNHIAWGRFTLLTSIGLLLGVTQFVLWGYLLSYGIDTLPLLKE
AELFVVEHIQSILMLVFLSVFLFIAKRYRWRRLGLKFTFALIAAVAYLNYSHFFWSADDLIKDVKANPLYFDETRTVFKA
FPGESSFFDAQAINVVFIGNNPQTIMNQLGWIENKTFSRNDINLVDYFLLMRNKTPPVSDLFWNGRVQDMAFQLPGNLLK
RSHIRWWNAGRNSGEQQVWLGALSYDDGLTFTPYRGIVTMLHSIDSDVDKERDKFKRTIDLFSNNLFTSKQAYSAPVSKD
EEHDYYSDGEILVISTRTLPIGNNG

Sequences:

>Translated_425_residues
MFDTMTLFWGALFDALIGPNVFVPGEPFLIAAGFRLHQGIWSGVVAVILGGFLGDQISYVIGRRFGRNAQSWLMRWLPKT
RRPIARCRLLLQKRGTIVLVFSRLLGPVAWIVPFIAGVNHIAWGRFTLLTSIGLLLGVTQFVLWGYLLSYGIDTLPLLKE
AELFVVEHIQSILMLVFLSVFLFIAKRYRWRRLGLKFTFALIAAVAYLNYSHFFWSADDLIKDVKANPLYFDETRTVFKA
FPGESSFFDAQAINVVFIGNNPQTIMNQLGWIENKTFSRNDINLVDYFLLMRNKTPPVSDLFWNGRVQDMAFQLPGNLLK
RSHIRWWNAGRNSGEQQVWLGALSYDDGLTFTPYRGIVTMLHSIDSDVDKERDKFKRTIDLFSNNLFTSKQAYSAPVSKD
EEHDYYSDGEILVISTRTLPIGNNG
>Mature_425_residues
MFDTMTLFWGALFDALIGPNVFVPGEPFLIAAGFRLHQGIWSGVVAVILGGFLGDQISYVIGRRFGRNAQSWLMRWLPKT
RRPIARCRLLLQKRGTIVLVFSRLLGPVAWIVPFIAGVNHIAWGRFTLLTSIGLLLGVTQFVLWGYLLSYGIDTLPLLKE
AELFVVEHIQSILMLVFLSVFLFIAKRYRWRRLGLKFTFALIAAVAYLNYSHFFWSADDLIKDVKANPLYFDETRTVFKA
FPGESSFFDAQAINVVFIGNNPQTIMNQLGWIENKTFSRNDINLVDYFLLMRNKTPPVSDLFWNGRVQDMAFQLPGNLLK
RSHIRWWNAGRNSGEQQVWLGALSYDDGLTFTPYRGIVTMLHSIDSDVDKERDKFKRTIDLFSNNLFTSKQAYSAPVSKD
EEHDYYSDGEILVISTRTLPIGNNG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48566; Mature: 48566

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA