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The map label for this gene is ycdQ [C]

Identifier: 59712006

GI number: 59712006

Start: 1547120

End: 1547851

Strand: Reverse

Name: ycdQ [C]

Synonym: VF_1399

Alternate gene names: 59712006

Gene position: 1547851-1547120 (Counterclockwise)

Preceding gene: 59712007

Following gene: 59712005

Centisome position: 53.42

GC content: 35.79

Gene sequence:

>732_bases
ATGAACCCATTAAGCATTGTTATTATTACTTTAAATGAAGAAAATCGTATTGGACGTTTACTTGAAGATTTAACAGAGCA
AACATTCAAAAATTTTGAAGTAATTGTTGTTGATTCAAATAGTTCAGATGCGACGTGTGAGGTTGCACAATCCTTCTCTG
CAAGTATTCCTGATTTAACCGTTCATAAAATGGATAAACAAGGAGTTAGTCTAGGTCGTAATACAGGAGCATCACTTGCT
AAACATGAACGTTTATTATTTTTAGATGCTGACGTGCGTTTGTCTCCAGACTTTCTTACTAAAGCATTAACTCAACTTAA
TGAAAAAGGACTTGAAGTGGCAGGCGTATATATGGGCTCGAAAGGGTTACCTGTTGCTCATAAACTTGGTTATATGACGT
TTAATATTGGTCTGTTTCTAACTCAATTTGCATTTCCTACCGCAGTTGGAGCGTGTATTTTTTCGACTAGAAGAGCGCAT
AAAGATCTTCTTGGCTTCGATGAAAATATTACGTTATGCGAAGATTGTGATTACGTAAAAAGAGCAAGCAGAACTTGGCG
TTTTCGTTTTCTTCCAATGACATTTGAGTTTGATCCACGTCGTTTAGAACAAGATGGCTTTTTGCGAATGGGGTATACCT
ATTTAAAAGCTAATGTTCGCCGTTTCTTGTTTGGAGAAATGCGCAATAACGAAATGGAATATAAGTTCGGACATTATTCA
AATCAAAAGTAA

Upstream 100 bases:

>100_bases
AAGAATGAATCAAAGATGAATAAACCTCTCACCATTGGTTAAGATAGTATTCGTTATTATGGCCTCAAGTAGCTTAATTC
ATTTTACTTGGAGGTACACT

Downstream 100 bases:

>100_bases
TTTATACGTAAAGGTAAATTATGTTTGATACGATGACTTTGTTTTGGGGCGCATTATTTGATGCGCTCATAGGACCTAAT
GTATTTGTTCCTGGGGAACC

Product: cell wall biogenesis glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase GT2 Family; Glycoside Hydrolase Family 2 Protein; Glycosyltransferase Protein; UDP-Hexose Transferase; Capsular Polysaccharide Biosynthesis Protein CpsJ; Teichoic Acid Biosynthesis Related Protein; Beta-1 3-Galactosyltransferase; Glycosyl Transferase Group 2 Family; Beta1 3-Glucosyltransferase; Glycosyltransferase-Like; Minor Teichoic Acids Biosynthesis Protein Ggab RP

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNPLSIVIITLNEENRIGRLLEDLTEQTFKNFEVIVVDSNSSDATCEVAQSFSASIPDLTVHKMDKQGVSLGRNTGASLA
KHERLLFLDADVRLSPDFLTKALTQLNEKGLEVAGVYMGSKGLPVAHKLGYMTFNIGLFLTQFAFPTAVGACIFSTRRAH
KDLLGFDENITLCEDCDYVKRASRTWRFRFLPMTFEFDPRRLEQDGFLRMGYTYLKANVRRFLFGEMRNNEMEYKFGHYS
NQK

Sequences:

>Translated_243_residues
MNPLSIVIITLNEENRIGRLLEDLTEQTFKNFEVIVVDSNSSDATCEVAQSFSASIPDLTVHKMDKQGVSLGRNTGASLA
KHERLLFLDADVRLSPDFLTKALTQLNEKGLEVAGVYMGSKGLPVAHKLGYMTFNIGLFLTQFAFPTAVGACIFSTRRAH
KDLLGFDENITLCEDCDYVKRASRTWRFRFLPMTFEFDPRRLEQDGFLRMGYTYLKANVRRFLFGEMRNNEMEYKFGHYS
NQK
>Mature_243_residues
MNPLSIVIITLNEENRIGRLLEDLTEQTFKNFEVIVVDSNSSDATCEVAQSFSASIPDLTVHKMDKQGVSLGRNTGASLA
KHERLLFLDADVRLSPDFLTKALTQLNEKGLEVAGVYMGSKGLPVAHKLGYMTFNIGLFLTQFAFPTAVGACIFSTRRAH
KDLLGFDENITLCEDCDYVKRASRTWRFRFLPMTFEFDPRRLEQDGFLRMGYTYLKANVRRFLFGEMRNNEMEYKFGHYS
NQK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787259, Length=210, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27740; Mature: 27740

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLSIVIITLNEENRIGRLLEDLTEQTFKNFEVIVVDSNSSDATCEVAQSFSASIPDLT
CCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCCE
VHKMDKQGVSLGRNTGASLAKHERLLFLDADVRLSPDFLTKALTQLNEKGLEVAGVYMGS
EECCCCCCCCCCCCCCCHHHHCCEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEEECC
KGLPVAHKLGYMTFNIGLFLTQFAFPTAVGACIFSTRRAHKDLLGFDENITLCEDCDYVK
CCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH
RASRTWRFRFLPMTFEFDPRRLEQDGFLRMGYTYLKANVRRFLFGEMRNNEMEYKFGHYS
HCCCCEEEEEEEEEEECCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
NQK
CCC
>Mature Secondary Structure
MNPLSIVIITLNEENRIGRLLEDLTEQTFKNFEVIVVDSNSSDATCEVAQSFSASIPDLT
CCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCCE
VHKMDKQGVSLGRNTGASLAKHERLLFLDADVRLSPDFLTKALTQLNEKGLEVAGVYMGS
EECCCCCCCCCCCCCCCHHHHCCEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEEECC
KGLPVAHKLGYMTFNIGLFLTQFAFPTAVGACIFSTRRAHKDLLGFDENITLCEDCDYVK
CCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHH
RASRTWRFRFLPMTFEFDPRRLEQDGFLRMGYTYLKANVRRFLFGEMRNNEMEYKFGHYS
HCCCCEEEEEEEEEEECCHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
NQK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA