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The map label for this gene is fdhD [H]

Identifier: 59711973

GI number: 59711973

Start: 1510278

End: 1511099

Strand: Direct

Name: fdhD [H]

Synonym: VF_1366

Alternate gene names: 59711973

Gene position: 1510278-1511099 (Clockwise)

Preceding gene: 59711957

Following gene: 59711985

Centisome position: 52.12

GC content: 40.02

Gene sequence:

>822_bases
TTGAGCCAATCACCTAAAATAATTACTACTGGCACTGTACCAAAACAAACCATTTCTGTTGATGTTTATGATGAATATGG
TGAAAAGCTAACAAAAGAGATCGCATGTGAACAACCTTTAACCGTAATGCTGAATTGGCAAGAAGTTGTAACGTTAATGA
CCCTTGGCGCTCGCCCTGCTGAGTTGGTCTTAGGGTACTTAAAGAACCAACATTTTGTTACTGACGCTTCTCTTTTAGAA
TCGGTGATTATTGATTGGGAAACCAAAACGGCTGCTGTAAATACGAAAGAGACCACTGAACACGTTAAAGAAAACTTGAA
GAAAAAGACGGTTACTTCAGGTTGTGGTCAAGGCACCATGTACGGCAACGTAATGAAGCAACTTGAAAACTATCAAGTAC
CACAAGTAACTATCAATCAATCTGATCTTTACGAATCATTAGAAGCGCTGACATATCACAACGATACTTACAAAGCAGCA
GGTGCCGTGCATGGCTGTGCAGTGTGTAAAGACAATAAAGTGCTTTCATTTGTGGAAGATGTAGGTCGCCATAACGCAGT
TGATACATTAGCTGGGGAGCTATGGTTAAAACAAGAAGCTGGTGATGACAAACTCTTCTACACCACTGGTCGTTTAACGT
CAGAAATGGTTATTAAAGTCGCTCAGATGGGCATTCCTGTTCTGCTTTCACGCTCTGGTGTAACTCAAATGGGTTTAGAT
TTAGCTAAGAAGTTTGGCATTACCATTATTGCTCGTGCAAAAGGTAAGCGTTTCCAAGTATTTGCTGGGCATGAAAAAAT
CAATTTTGATGTGAAAGGTTAA

Upstream 100 bases:

>100_bases
AAGCAAAGCTTGTACCAACCACGCTTTCTTTTTTTACTCTATGGTATAAAATTTGCCTAACCTAGATAAATAATCAAATC
TCATTCATTTGGAGCTTACT

Downstream 100 bases:

>100_bases
GTAGAGCCATAGGGACTAGGTGCTAGGAAAAGCAGGAACGAGTGAGAGCGAAAAGCAGTTACTCGTCCCTGCTCTCACTC
GCCACTAGTCCCTCAAGACT

Product: FdhD protein (FdsC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSQSPKIITTGTVPKQTISVDVYDEYGEKLTKEIACEQPLTVMLNWQEVVTLMTLGARPAELVLGYLKNQHFVTDASLLE
SVIIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDLYESLEALTYHNDTYKAA
GAVHGCAVCKDNKVLSFVEDVGRHNAVDTLAGELWLKQEAGDDKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLD
LAKKFGITIIARAKGKRFQVFAGHEKINFDVKG

Sequences:

>Translated_273_residues
MSQSPKIITTGTVPKQTISVDVYDEYGEKLTKEIACEQPLTVMLNWQEVVTLMTLGARPAELVLGYLKNQHFVTDASLLE
SVIIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDLYESLEALTYHNDTYKAA
GAVHGCAVCKDNKVLSFVEDVGRHNAVDTLAGELWLKQEAGDDKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLD
LAKKFGITIIARAKGKRFQVFAGHEKINFDVKG
>Mature_272_residues
SQSPKIITTGTVPKQTISVDVYDEYGEKLTKEIACEQPLTVMLNWQEVVTLMTLGARPAELVLGYLKNQHFVTDASLLES
VIIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDLYESLEALTYHNDTYKAAG
AVHGCAVCKDNKVLSFVEDVGRHNAVDTLAGELWLKQEAGDDKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLDL
AKKFGITIIARAKGKRFQVFAGHEKINFDVKG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30154; Mature: 30023

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPKIITTGTVPKQTISVDVYDEYGEKLTKEIACEQPLTVMLNWQEVVTLMTLGARPA
CCCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCHH
ELVLGYLKNQHFVTDASLLESVIIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTM
HHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
YGNVMKQLENYQVPQVTINQSDLYESLEALTYHNDTYKAAGAVHGCAVCKDNKVLSFVED
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHCCHHEEEEECCCCHHHHHHH
VGRHNAVDTLAGELWLKQEAGDDKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLD
HHCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCHHHHHH
LAKKFGITIIARAKGKRFQVFAGHEKINFDVKG
HHHHCCEEEEEECCCCEEEEEECCEEEEEEECC
>Mature Secondary Structure 
SQSPKIITTGTVPKQTISVDVYDEYGEKLTKEIACEQPLTVMLNWQEVVTLMTLGARPA
CCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCHH
ELVLGYLKNQHFVTDASLLESVIIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTM
HHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCH
YGNVMKQLENYQVPQVTINQSDLYESLEALTYHNDTYKAAGAVHGCAVCKDNKVLSFVED
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCHHHHCCHHEEEEECCCCHHHHHHH
VGRHNAVDTLAGELWLKQEAGDDKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQMGLD
HHCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCHHHHHH
LAKKFGITIIARAKGKRFQVFAGHEKINFDVKG
HHHHCCEEEEEECCCCEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA