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The map label for this gene is yaaH [H]

Identifier: 59711757

GI number: 59711757

Start: 1276275

End: 1276862

Strand: Direct

Name: yaaH [H]

Synonym: VF_1150

Alternate gene names: 59711757

Gene position: 1276275-1276862 (Clockwise)

Preceding gene: 59711753

Following gene: 59711759

Centisome position: 44.05

GC content: 40.99

Gene sequence:

>588_bases
ATGTCAAACAAACTTGCAAACCCTGCACCATTAGGCCTAATGGCTTTTGGTATGACAACTGTACTACTTAACCTGCACAA
CGCTGGTTTCTTCCCATTAAACACAGCTATTTTAGCTATGGGTATCTTCTATGGTGGTACTGCGCAAGTAATTGCTGGCA
TCATGGAATACAAAAAAGGTAACACATTTGGTACGACTGCATTTACTTCGTACGGTTTCTTCTGGTTATCTTTAGTTGCA
CTTATCCTTATGCCTGAAATGGGTCTAGGTCAAGCTACTTCAGCTACATTCATGGGTTGGTACCTATCTATGTGGGGTGT
ACTAACATTCTTCTTGTTCTTAGGTACATTTAACTACCCACGCGCAAAACAAGTTGTATTTGCAAGCCTAACAATTCTAT
TTGCATTACTTGCAGCTCGTGATTTCACTGGTAGCGTAGTAATTGGCCACTTAGCTGGTTATGTTGGTCTTTTCTGTGGC
CTAAGTGCAATGTACTTCTCTATGGCTCAAGTAATTAACGGTGAGTACGGCCGTACTGTACTACCTGTTGGTGAAGTAAA
AGCTAAAGCAGAAACAGTAACTGCATAA

Upstream 100 bases:

>100_bases
TTTCATAAATGATGGTTGTGATCTTCATCACCCGGAAATAAACTGCGCGCCTAAACCTAAACACCTTTTTAATTTTTACA
CTTTTTTTTGAGGCTTCGGC

Downstream 100 bases:

>100_bases
GTTTTAAGTTTCCATGAAAAAGGCAGCTCATAAAAGAGCTGCCTTTTTTGTGTCTGTAAGAAATTGCTTACTTGTCTAAA
GACATTAATGCTTCTTGTGT

Product: inner membrane protein associated with acetate transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSNKLANPAPLGLMAFGMTTVLLNLHNAGFFPLNTAILAMGIFYGGTAQVIAGIMEYKKGNTFGTTAFTSYGFFWLSLVA
LILMPEMGLGQATSATFMGWYLSMWGVLTFFLFLGTFNYPRAKQVVFASLTILFALLAARDFTGSVVIGHLAGYVGLFCG
LSAMYFSMAQVINGEYGRTVLPVGEVKAKAETVTA

Sequences:

>Translated_195_residues
MSNKLANPAPLGLMAFGMTTVLLNLHNAGFFPLNTAILAMGIFYGGTAQVIAGIMEYKKGNTFGTTAFTSYGFFWLSLVA
LILMPEMGLGQATSATFMGWYLSMWGVLTFFLFLGTFNYPRAKQVVFASLTILFALLAARDFTGSVVIGHLAGYVGLFCG
LSAMYFSMAQVINGEYGRTVLPVGEVKAKAETVTA
>Mature_194_residues
SNKLANPAPLGLMAFGMTTVLLNLHNAGFFPLNTAILAMGIFYGGTAQVIAGIMEYKKGNTFGTTAFTSYGFFWLSLVAL
ILMPEMGLGQATSATFMGWYLSMWGVLTFFLFLGTFNYPRAKQVVFASLTILFALLAARDFTGSVVIGHLAGYVGLFCGL
SAMYFSMAQVINGEYGRTVLPVGEVKAKAETVTA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=184, Percent_Identity=63.0434782608696, Blast_Score=237, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6324329, Length=177, Percent_Identity=35.5932203389831, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319855, Length=122, Percent_Identity=42.6229508196721, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 20930; Mature: 20799

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKLANPAPLGLMAFGMTTVLLNLHNAGFFPLNTAILAMGIFYGGTAQVIAGIMEYKKG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
NTFGTTAFTSYGFFWLSLVALILMPEMGLGQATSATFMGWYLSMWGVLTFFLFLGTFNYP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RAKQVVFASLTILFALLAARDFTGSVVIGHLAGYVGLFCGLSAMYFSMAQVINGEYGRTV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LPVGEVKAKAETVTA
CCHHHHHHHHHHCCC
>Mature Secondary Structure 
SNKLANPAPLGLMAFGMTTVLLNLHNAGFFPLNTAILAMGIFYGGTAQVIAGIMEYKKG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
NTFGTTAFTSYGFFWLSLVALILMPEMGLGQATSATFMGWYLSMWGVLTFFLFLGTFNYP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RAKQVVFASLTILFALLAARDFTGSVVIGHLAGYVGLFCGLSAMYFSMAQVINGEYGRTV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LPVGEVKAKAETVTA
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]