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The map label for this gene is 59711753

Identifier: 59711753

GI number: 59711753

Start: 1269512

End: 1271881

Strand: Direct

Name: 59711753

Synonym: VF_1146

Alternate gene names: NA

Gene position: 1269512-1271881 (Clockwise)

Preceding gene: 59711752

Following gene: 59711757

Centisome position: 43.81

GC content: 41.05

Gene sequence:

>2370_bases
ATGAAAAAAATAAATAAAATAACTCTGGCAATATTGAGTTCAATGCTTAGTGGCTATGTGTATGCATCAGATGTAATTCA
AAAAACCAATGTTGCTCCTGTTACTTCTGGTGGGCTATGTGAGAGTTTCAATGTTTATCCTGATTGGACTCGTGGAGATC
ATGCGACAAATGGTGACATTATGGTGCATGAAAATATCGCTTATTCAGCAGTTTATTGGACACAAAGCATCCCAGGTAGT
GATAGTTCGTGGGCTCTTCATTTAAATTGTGATGGTTCAGAGCCTGGCACTGCACCTGTTCTTTCGCTACAAAACCCTCT
TGATCCTATTCGTTTAGAAGTAGCGGGCTGGCCAAATACCTTCGTGGTGGCGAGTCCATCTACATTAGCACCTGCGACTA
TAACCATTCAGGCAAGCAATAGTGATTCGTTAGCTGATGTTGATCAGTTAACAAGTGCATTTGTATCTATTATTGAACAA
GCTGAGAATGCAGGTGCGGCATCACTTATTATCAGTTCGGATGTGTTGGATCTTGCAACTCAAGATAAAGGCGAGTCTCT
AGGTACTGTCGCTGTTAAACAAGCATTGACTAATGCTATCAATATGACAAACAGCAATATTGATATTACAGCTATCAACG
CATTATCTGATGATTTAAAAGGGTGGGCTCAAGCGCACAACTTAATCCTTAGCACTCTTGCACCTAATGCAAATTTTGGT
TGGTCAGTGAGTATTGGTGATTTTGCATACGATACGCATTCTGGCCGTCAATCCGTGTGGGATAAAGCGTCAGTATTCAG
CGCGGATCTACTAGCGACATTAGAGCTATACAAAGTAGATGCAATCAATAAAGCTGACTTTGTCGTGTTTACTAAATCAA
GTACAACAGCGGCTCTAACAAGTGACCAATGGCACAATGCTTTAGAATATGTAAAACAAGTGTCTGATTATATTAAGGCT
CCTGCGATGTTGGCTAACATGCCAACAAACCAAGCCGCAGATTATTTTATGGGGAACTCGGTTAGTAAGCCTCAGTTACG
TAAAGCGGCATTCAGTAACGTATTTGCACTAACATTTGATCAAGATAGCCAAGAACTAACCGCTAAGATTGAGCGTTATC
AGAATGCGAAAATTCCATTGTACTATGTGGGCGAAGAGCTAGAGAAAGGATCGTTAACTCGTATTGAAGCTTTAAACCAA
CAATTAGCTGCTGCTGAAAATGCAATGGACAATGAAGCATTTTTGTATGAAACACCACAATCACAGTGGATCCCATCAAC
AGTATACAAGTGGAATGATTTCTTAGATGGCTTAAATGCAATGCACAACATTGGTGTTGCAGGCAATAAGTTCTGGTTAA
TGAACGATGAAGTTGATGATGAAACAAACATCAAATACGCGAAAGTAGCGATAGCCGCTTTCTTAGCACAAAGTATGCAA
GAAACAATTCGCTACAATGCGTGTGATGAAAATAACTGGTCTGAAATTAAATATGGTGCACCAACTGATTACCCGATGAC
AGCGAGTTGTGGTCAACTTGGTCAGAAGTATGCGGATTACGGTGTGAACCCTGTTTCTGGGTTAGATTATGCGTATTCAT
GTCCTCGTGATAATAAGATGGAAGTAAGTGCTTTAACTCATGCTAAATGGTATGGAGCACCTGCGCCTGTTTTCGCTGCT
CCAGATGCGGTACTTGAAGAGCGAGGTTTATTGGTAAATGGCCATGCAGGTCGTTGGACAAATAACGGTCACTGTAATGA
AGTCCCTGAAAAAGTAGATACGTCGAAACAAGTATGGGAACGTGATGAGTGTAAAATCTACGTTGGCCAAAAAGCAGGTA
CGTTTATTTGGGATGGTAGCAGTCAAGAAAGTGTTGAAGGCTGTGGTTGGTGGGGGCGTGGAGTTATCCAAACAACGGGC
CGTCAAAACTTCGGTACACTTAACCACTACTTAGGACGTTCACACGTTGATCCAGACACCATTGGTACAACAATTGATGG
TGTAACGGTAGAAGCGCCACCAGCAAATCCACTTTACGCAGAACTTGATTTTTGTTCAAACCCAGGTTTGATCTGTAGCT
CTGAAGAGAGTAAAGAAATTAAGTGGATCGCAGGTCTGTTCTACTGGGTAACATCAGTACAAGCTTATAATGATGTAGGC
GGTCAATATGCTGATTGGAACTACTATAACGAGCTGAAAAAGTACGTAGATAGCGGCTTGCAAGGGACTCAATTTATAGA
TGATGTTTCTGGCATTGTAAACCGTGGTTGTCCTGATACGACGTGTTCAACTGGTGATGTTCATAACATTAAAGAGCGTC
AAGATAACTTCAAATTAGTATTACAAAAATTAGGTCTTAACCCACAATAA

Upstream 100 bases:

>100_bases
AATGATTCGAAGAAAGTTGCACGGAGTGCAATGGTCAATAATCGAGAGAATCAGATACTTGATTTGTTGAAATATATAAA
CATGGAAAGAAATAATAATT

Downstream 100 bases:

>100_bases
ACCGTCAACCCTGTTTACTCATTGTTTTTAGCAGATGTTGAACGCTTAAGAAGTGAGAAGGGTAAGTACTAATATACAAA
AATCCCCATTAATAATGATT

Product: chitodextrinase precursor

Products: beta-D-Gal-(1->3)-D-GlcNAc; beta-D-Gal-(1->4)-D-Glc; lacto-N-biose; lactose

Alternate protein names: NA

Number of amino acids: Translated: 789; Mature: 789

Protein sequence:

>789_residues
MKKINKITLAILSSMLSGYVYASDVIQKTNVAPVTSGGLCESFNVYPDWTRGDHATNGDIMVHENIAYSAVYWTQSIPGS
DSSWALHLNCDGSEPGTAPVLSLQNPLDPIRLEVAGWPNTFVVASPSTLAPATITIQASNSDSLADVDQLTSAFVSIIEQ
AENAGAASLIISSDVLDLATQDKGESLGTVAVKQALTNAINMTNSNIDITAINALSDDLKGWAQAHNLILSTLAPNANFG
WSVSIGDFAYDTHSGRQSVWDKASVFSADLLATLELYKVDAINKADFVVFTKSSTTAALTSDQWHNALEYVKQVSDYIKA
PAMLANMPTNQAADYFMGNSVSKPQLRKAAFSNVFALTFDQDSQELTAKIERYQNAKIPLYYVGEELEKGSLTRIEALNQ
QLAAAENAMDNEAFLYETPQSQWIPSTVYKWNDFLDGLNAMHNIGVAGNKFWLMNDEVDDETNIKYAKVAIAAFLAQSMQ
ETIRYNACDENNWSEIKYGAPTDYPMTASCGQLGQKYADYGVNPVSGLDYAYSCPRDNKMEVSALTHAKWYGAPAPVFAA
PDAVLEERGLLVNGHAGRWTNNGHCNEVPEKVDTSKQVWERDECKIYVGQKAGTFIWDGSSQESVEGCGWWGRGVIQTTG
RQNFGTLNHYLGRSHVDPDTIGTTIDGVTVEAPPANPLYAELDFCSNPGLICSSEESKEIKWIAGLFYWVTSVQAYNDVG
GQYADWNYYNELKKYVDSGLQGTQFIDDVSGIVNRGCPDTTCSTGDVHNIKERQDNFKLVLQKLGLNPQ

Sequences:

>Translated_789_residues
MKKINKITLAILSSMLSGYVYASDVIQKTNVAPVTSGGLCESFNVYPDWTRGDHATNGDIMVHENIAYSAVYWTQSIPGS
DSSWALHLNCDGSEPGTAPVLSLQNPLDPIRLEVAGWPNTFVVASPSTLAPATITIQASNSDSLADVDQLTSAFVSIIEQ
AENAGAASLIISSDVLDLATQDKGESLGTVAVKQALTNAINMTNSNIDITAINALSDDLKGWAQAHNLILSTLAPNANFG
WSVSIGDFAYDTHSGRQSVWDKASVFSADLLATLELYKVDAINKADFVVFTKSSTTAALTSDQWHNALEYVKQVSDYIKA
PAMLANMPTNQAADYFMGNSVSKPQLRKAAFSNVFALTFDQDSQELTAKIERYQNAKIPLYYVGEELEKGSLTRIEALNQ
QLAAAENAMDNEAFLYETPQSQWIPSTVYKWNDFLDGLNAMHNIGVAGNKFWLMNDEVDDETNIKYAKVAIAAFLAQSMQ
ETIRYNACDENNWSEIKYGAPTDYPMTASCGQLGQKYADYGVNPVSGLDYAYSCPRDNKMEVSALTHAKWYGAPAPVFAA
PDAVLEERGLLVNGHAGRWTNNGHCNEVPEKVDTSKQVWERDECKIYVGQKAGTFIWDGSSQESVEGCGWWGRGVIQTTG
RQNFGTLNHYLGRSHVDPDTIGTTIDGVTVEAPPANPLYAELDFCSNPGLICSSEESKEIKWIAGLFYWVTSVQAYNDVG
GQYADWNYYNELKKYVDSGLQGTQFIDDVSGIVNRGCPDTTCSTGDVHNIKERQDNFKLVLQKLGLNPQ
>Mature_789_residues
MKKINKITLAILSSMLSGYVYASDVIQKTNVAPVTSGGLCESFNVYPDWTRGDHATNGDIMVHENIAYSAVYWTQSIPGS
DSSWALHLNCDGSEPGTAPVLSLQNPLDPIRLEVAGWPNTFVVASPSTLAPATITIQASNSDSLADVDQLTSAFVSIIEQ
AENAGAASLIISSDVLDLATQDKGESLGTVAVKQALTNAINMTNSNIDITAINALSDDLKGWAQAHNLILSTLAPNANFG
WSVSIGDFAYDTHSGRQSVWDKASVFSADLLATLELYKVDAINKADFVVFTKSSTTAALTSDQWHNALEYVKQVSDYIKA
PAMLANMPTNQAADYFMGNSVSKPQLRKAAFSNVFALTFDQDSQELTAKIERYQNAKIPLYYVGEELEKGSLTRIEALNQ
QLAAAENAMDNEAFLYETPQSQWIPSTVYKWNDFLDGLNAMHNIGVAGNKFWLMNDEVDDETNIKYAKVAIAAFLAQSMQ
ETIRYNACDENNWSEIKYGAPTDYPMTASCGQLGQKYADYGVNPVSGLDYAYSCPRDNKMEVSALTHAKWYGAPAPVFAA
PDAVLEERGLLVNGHAGRWTNNGHCNEVPEKVDTSKQVWERDECKIYVGQKAGTFIWDGSSQESVEGCGWWGRGVIQTTG
RQNFGTLNHYLGRSHVDPDTIGTTIDGVTVEAPPANPLYAELDFCSNPGLICSSEESKEIKWIAGLFYWVTSVQAYNDVG
GQYADWNYYNELKKYVDSGLQGTQFIDDVSGIVNRGCPDTTCSTGDVHNIKERQDNFKLVLQKLGLNPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.14

Molecular weight: Translated: 86315; Mature: 86315

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKINKITLAILSSMLSGYVYASDVIQKTNVAPVTSGGLCESFNVYPDWTRGDHATNGDI
CCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
MVHENIAYSAVYWTQSIPGSDSSWALHLNCDGSEPGTAPVLSLQNPLDPIRLEVAGWPNT
EEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCE
FVVASPSTLAPATITIQASNSDSLADVDQLTSAFVSIIEQAENAGAASLIISSDVLDLAT
EEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
QDKGESLGTVAVKQALTNAINMTNSNIDITAINALSDDLKGWAQAHNLILSTLAPNANFG
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WSVSIGDFAYDTHSGRQSVWDKASVFSADLLATLELYKVDAINKADFVVFTKSSTTAALT
EEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEC
SDQWHNALEYVKQVSDYIKAPAMLANMPTNQAADYFMGNSVSKPQLRKAAFSNVFALTFD
CHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHCCEEEEEEC
QDSQELTAKIERYQNAKIPLYYVGEELEKGSLTRIEALNQQLAAAENAMDNEAFLYETPQ
CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SQWIPSTVYKWNDFLDGLNAMHNIGVAGNKFWLMNDEVDDETNIKYAKVAIAAFLAQSMQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
ETIRYNACDENNWSEIKYGAPTDYPMTASCGQLGQKYADYGVNPVSGLDYAYSCPRDNKM
HHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCE
EVSALTHAKWYGAPAPVFAAPDAVLEERGLLVNGHAGRWTNNGHCNEVPEKVDTSKQVWE
EEEEEEHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHCCHHHHHC
RDECKIYVGQKAGTFIWDGSSQESVEGCGWWGRGVIQTTGRQNFGTLNHYLGRSHVDPDT
CCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCHHH
IGTTIDGVTVEAPPANPLYAELDFCSNPGLICSSEESKEIKWIAGLFYWVTSVQAYNDVG
CCCEECCEEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
GQYADWNYYNELKKYVDSGLQGTQFIDDVSGIVNRGCPDTTCSTGDVHNIKERQDNFKLV
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LQKLGLNPQ
HHHHCCCCC
>Mature Secondary Structure
MKKINKITLAILSSMLSGYVYASDVIQKTNVAPVTSGGLCESFNVYPDWTRGDHATNGDI
CCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
MVHENIAYSAVYWTQSIPGSDSSWALHLNCDGSEPGTAPVLSLQNPLDPIRLEVAGWPNT
EEECCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCE
FVVASPSTLAPATITIQASNSDSLADVDQLTSAFVSIIEQAENAGAASLIISSDVLDLAT
EEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
QDKGESLGTVAVKQALTNAINMTNSNIDITAINALSDDLKGWAQAHNLILSTLAPNANFG
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WSVSIGDFAYDTHSGRQSVWDKASVFSADLLATLELYKVDAINKADFVVFTKSSTTAALT
EEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCCEEEEC
SDQWHNALEYVKQVSDYIKAPAMLANMPTNQAADYFMGNSVSKPQLRKAAFSNVFALTFD
CHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHCCEEEEEEC
QDSQELTAKIERYQNAKIPLYYVGEELEKGSLTRIEALNQQLAAAENAMDNEAFLYETPQ
CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SQWIPSTVYKWNDFLDGLNAMHNIGVAGNKFWLMNDEVDDETNIKYAKVAIAAFLAQSMQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
ETIRYNACDENNWSEIKYGAPTDYPMTASCGQLGQKYADYGVNPVSGLDYAYSCPRDNKM
HHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEECCCCCCCE
EVSALTHAKWYGAPAPVFAAPDAVLEERGLLVNGHAGRWTNNGHCNEVPEKVDTSKQVWE
EEEEEEHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHCCHHHHHC
RDECKIYVGQKAGTFIWDGSSQESVEGCGWWGRGVIQTTGRQNFGTLNHYLGRSHVDPDT
CCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCHHH
IGTTIDGVTVEAPPANPLYAELDFCSNPGLICSSEESKEIKWIAGLFYWVTSVQAYNDVG
CCCEECCEEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
GQYADWNYYNELKKYVDSGLQGTQFIDDVSGIVNRGCPDTTCSTGDVHNIKERQDNFKLV
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LQKLGLNPQ
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-D-Gal-(1->3)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc; H2O; lacto-N-tetraose

Specific reaction: (1) beta-D-Gal-(1->3)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc + H2O = beta-D-Gal-(1->3)-D-GlcNAc + beta-D-Gal-(1->4)-D-Glc; (2) lacto-N-tetraose + H2O = lacto-N-biose + lactose

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA