| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711747
Identifier: 59711747
GI number: 59711747
Start: 1263011
End: 1263754
Strand: Reverse
Name: 59711747
Synonym: VF_1140
Alternate gene names: NA
Gene position: 1263754-1263011 (Counterclockwise)
Preceding gene: 59711754
Following gene: 59711745
Centisome position: 43.61
GC content: 37.77
Gene sequence:
>744_bases ATGTCCTCTAACGCTTTATATACTGATTTATCTGGCTATTACGATTTAATGTGTGCTGACATTGATTATCAATCACAAAG TAATTTTGTACGTCGTATACACCAAATCTTTGGTAATCAAGGAAGAGATTATCTTGACTTAGCGTGTGGTACAGGGCCAC ATGTTCATCATTTTATTAATTATGGCTACCAAGCAAGTGGTTTAGACATTAACCAACCTATGCTTGATATTGCTAAACAG CGTAACCCTGATGCGAATTTTATTTTGCATGACATGAGTAATTTCAAGGTTGAAGAATCATTGGATTTAATCACCTGTTT TCTTTATTCCATTCATTACAATGCGAATATAGAAAAACTGAGTGAATGTATTGCAAGTGCTCATGCCGCATTAAAGCCTG AAGGTGTGCTTTGTTTTAACTCTGTAGCTAAAAACAAAATCGACAATCGTTCATTTGTAAAACACGCTGCAGAACATGAA GGCAGTCAATTTAGCTTCCAATCAGGTTGGAACTATTGCGGCGAGGGTGAGCAACAGCACTTATTGCTGAAAATAGAAAA GACAACAGATGGTGTAACCGAAATTTGGGATGACAAACACCCAATGGTTGCCGTTGACTTTAACCAGCTAACAGCCTTGT TAGAGCCGTACTTTGACGTTCATATGTTTGAACATGACTATGAAAAGATCACTCCACTTGAAGCCTCATCAGGCAATGCC ATCGTGGTATGTGTGAAAAAATAG
Upstream 100 bases:
>100_bases GCTTTGTCATTCCTTATAAGACGTTTTTCTTTTATACCTCTCAAAATAAGCAGTTAATCAAACACTTAAAGTAGACTGGT GTTGTAATGGATAGGTTAAA
Downstream 100 bases:
>100_bases CACTCATAAAAAATCCGCCATTATCGGCGGATTTTTTTATTCTGATTTATTGAGAATCAAAATTATAGATAGTTAGCATC AACTAAATCGCTCACTTCGA
Product: methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; N N-Dimethyltransferase; Methyltransferase Domain Family
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSSNALYTDLSGYYDLMCADIDYQSQSNFVRRIHQIFGNQGRDYLDLACGTGPHVHHFINYGYQASGLDINQPMLDIAKQ RNPDANFILHDMSNFKVEESLDLITCFLYSIHYNANIEKLSECIASAHAALKPEGVLCFNSVAKNKIDNRSFVKHAAEHE GSQFSFQSGWNYCGEGEQQHLLLKIEKTTDGVTEIWDDKHPMVAVDFNQLTALLEPYFDVHMFEHDYEKITPLEASSGNA IVVCVKK
Sequences:
>Translated_247_residues MSSNALYTDLSGYYDLMCADIDYQSQSNFVRRIHQIFGNQGRDYLDLACGTGPHVHHFINYGYQASGLDINQPMLDIAKQ RNPDANFILHDMSNFKVEESLDLITCFLYSIHYNANIEKLSECIASAHAALKPEGVLCFNSVAKNKIDNRSFVKHAAEHE GSQFSFQSGWNYCGEGEQQHLLLKIEKTTDGVTEIWDDKHPMVAVDFNQLTALLEPYFDVHMFEHDYEKITPLEASSGNA IVVCVKK >Mature_246_residues SSNALYTDLSGYYDLMCADIDYQSQSNFVRRIHQIFGNQGRDYLDLACGTGPHVHHFINYGYQASGLDINQPMLDIAKQR NPDANFILHDMSNFKVEESLDLITCFLYSIHYNANIEKLSECIASAHAALKPEGVLCFNSVAKNKIDNRSFVKHAAEHEG SQFSFQSGWNYCGEGEQQHLLLKIEKTTDGVTEIWDDKHPMVAVDFNQLTALLEPYFDVHMFEHDYEKITPLEASSGNAI VVCVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27983; Mature: 27851
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNALYTDLSGYYDLMCADIDYQSQSNFVRRIHQIFGNQGRDYLDLACGTGPHVHHFIN CCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH YGYQASGLDINQPMLDIAKQRNPDANFILHDMSNFKVEESLDLITCFLYSIHYNANIEKL CCEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHH SECIASAHAALKPEGVLCFNSVAKNKIDNRSFVKHAAEHEGSQFSFQSGWNYCGEGEQQH HHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCCCCCCE LLLKIEKTTDGVTEIWDDKHPMVAVDFNQLTALLEPYFDVHMFEHDYEKITPLEASSGNA EEEEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCE IVVCVKK EEEEEEC >Mature Secondary Structure SSNALYTDLSGYYDLMCADIDYQSQSNFVRRIHQIFGNQGRDYLDLACGTGPHVHHFIN CCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH YGYQASGLDINQPMLDIAKQRNPDANFILHDMSNFKVEESLDLITCFLYSIHYNANIEKL CCEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHH SECIASAHAALKPEGVLCFNSVAKNKIDNRSFVKHAAEHEGSQFSFQSGWNYCGEGEQQH HHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCCCCCCE LLLKIEKTTDGVTEIWDDKHPMVAVDFNQLTALLEPYFDVHMFEHDYEKITPLEASSGNA EEEEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCE IVVCVKK EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA