Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59711734

Identifier: 59711734

GI number: 59711734

Start: 1247510

End: 1249264

Strand: Direct

Name: 59711734

Synonym: VF_1127

Alternate gene names: NA

Gene position: 1247510-1249264 (Clockwise)

Preceding gene: 59711733

Following gene: 59711735

Centisome position: 43.05

GC content: 36.01

Gene sequence:

>1755_bases
ATGAAATTAGTGATAAGACAATACTTAGCATCTTTAAAAGAACGAGGCGAGCTGGATGCTTTATTGCCCGATTTACTGTC
ACAAATTGGCTTAGAAGTTTTTTTAAAGCCGGGAGTTGGCAGCAGACAATATGGCGTGGATGTCGGTGCTTTCGGTAAGT
TGTCTAATGAATCAGAAAGTAAAGTTTATTTGTTTTCGGTAAAATCTGGCGATTTAAATCGGAGGGACTGGGATAGCACT
AACCCACAAGATTTACGTCCTTCTATTAATGAAATTATCGATGTATTTATTCCGACCCGTATTCCCGCAGAGTACAATGA
ATGCCCTGTTGAGGTTTGTTTATGCTTTGGTGGTGAAGTTAAAGAAGAAGTAAGATCTAACGTAAGTATGTTTTTAGGTA
AATTAAAAACTGATGACTTAAGTTTCTCTGAATGGAATGGCGACAGGCTTGCTGATTTAGTAGAGCAACATATGCTTCGT
GAGGAACTGTTGCCTAAGAACTGTCGCAGTTTACTCCGTAAGTCACTGGCGATGATTGACGAACCAGAAGTATCTTTCAA
ACACTTTAGCCAGCTTGCCATTAGCCTTACTTGTACTGATGACAAAAAACCAAAAGATATTTTAACGGGCATGCGCCAAT
TATATTTATGCCTTTGGATATTATACTCATGGTGCAGAGATGAGGATAACCTAGAGAGCGCATTCTTATCAGCAGAGTTT
ACGATGCTAAATTCCTGGGAAGCTGCGAAGTTTGCGTTTGGCAAAAAAAATAAGGTAGCAGTTTCTACACTGACAACTTT
AGATTCAATTCTTAGGTTAAATCTACAAGTATCAAATCAATATATTGATGAAAAAATTATACCTTATTGCAATAACTTGT
ATGCTATCTCCCACGCAGTAAAGCCGTCTTGTGCCACAGATGTAAACTTAAAATTGTTTGATGTTCTAGGTCGATTAGCA
CTTACTGGCTGTTGGTCTTATTGGTATTTAAGCCAAATTAATGATGAAAATGTAGAAGCAGGCAAGTTTTTTTCAGAAGC
AGTAACTAAATATCAAGACAGCATTAAGCAGTTAATCGTAAACAACCCTATTTTGTTTACACCATACAAAGATGAGCAAG
CAATAGATTTAGTATTAGCTCTTTGGTTCCTTTCTCTTGATCATAAACATTGGCGTGATATCAACTCTTGGTTGAGTAAT
ATGTCACGAGAGATATATCAAATGTTTAAGATCAACGATAAATACCCGACAACCATACGAAGTTATGCTGAATTAATAGA
ACACCCCGTTGATAAAACTGACGAGTATAAAAAGAGCGTCACTAAAGGTTCAATTTTATACCCCTATATATCTATCTTTT
CAGCGATTATGGGATTTTCAGAGCCATATGAAATAGTTAAAAAAATTAAAGAAGAGTTTTTACCACACTGTAACTTTCAA
GTGTACTTTCTTGATGAGTCCTCTGAAGATCATTTTTACCGATTCGATAAAATACATGGAGCAACATTATCTGATGTATG
CGTGACAGAAGAGCCAGGTGAATTGATTAAGCAGTTGGTTGGTGAGTGTGACCAATCAAATAAAGTTTATGATATGTCTG
CTTTTCAATACTCTTTTTGGCCGATTATATTAACTGGCTGTAGGCATTATAGGTTACCAGTGCCGATGCATTTTATTATT
GATATTTATAAGCAGAGAAAAGAACAAGAAGAAATTGAAACTGATAGCGGAAAAAGCACTGAAGGAATTAAATAA

Upstream 100 bases:

>100_bases
GTGAAATAAGTACATCATTTGAATTTGCATCAATGCACAACCTTGACCCGCATGGTTTAGAAAATATGATCTGGCAGTTT
AAAGCGGAGGGCTGTACGTC

Downstream 100 bases:

>100_bases
TGCAAATACGATTGAGTGAGATCCAGCTAAAAAACTTTAAATCTTTTGAAGATTTAACAATTTCACCTAATAACAGATTC
AATATCATCATTGGTGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESESKVYLFSVKSGDLNRRDWDST
NPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEVKEEVRSNVSMFLGKLKTDDLSFSEWNGDRLADLVEQHMLR
EELLPKNCRSLLRKSLAMIDEPEVSFKHFSQLAISLTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNLESAFLSAEF
TMLNSWEAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYCNNLYAISHAVKPSCATDVNLKLFDVLGRLA
LTGCWSYWYLSQINDENVEAGKFFSEAVTKYQDSIKQLIVNNPILFTPYKDEQAIDLVLALWFLSLDHKHWRDINSWLSN
MSREIYQMFKINDKYPTTIRSYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKKIKEEFLPHCNFQ
VYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNKVYDMSAFQYSFWPIILTGCRHYRLPVPMHFII
DIYKQRKEQEEIETDSGKSTEGIK

Sequences:

>Translated_584_residues
MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESESKVYLFSVKSGDLNRRDWDST
NPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEVKEEVRSNVSMFLGKLKTDDLSFSEWNGDRLADLVEQHMLR
EELLPKNCRSLLRKSLAMIDEPEVSFKHFSQLAISLTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNLESAFLSAEF
TMLNSWEAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYCNNLYAISHAVKPSCATDVNLKLFDVLGRLA
LTGCWSYWYLSQINDENVEAGKFFSEAVTKYQDSIKQLIVNNPILFTPYKDEQAIDLVLALWFLSLDHKHWRDINSWLSN
MSREIYQMFKINDKYPTTIRSYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKKIKEEFLPHCNFQ
VYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNKVYDMSAFQYSFWPIILTGCRHYRLPVPMHFII
DIYKQRKEQEEIETDSGKSTEGIK
>Mature_584_residues
MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESESKVYLFSVKSGDLNRRDWDST
NPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEVKEEVRSNVSMFLGKLKTDDLSFSEWNGDRLADLVEQHMLR
EELLPKNCRSLLRKSLAMIDEPEVSFKHFSQLAISLTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNLESAFLSAEF
TMLNSWEAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYCNNLYAISHAVKPSCATDVNLKLFDVLGRLA
LTGCWSYWYLSQINDENVEAGKFFSEAVTKYQDSIKQLIVNNPILFTPYKDEQAIDLVLALWFLSLDHKHWRDINSWLSN
MSREIYQMFKINDKYPTTIRSYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKKIKEEFLPHCNFQ
VYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNKVYDMSAFQYSFWPIILTGCRHYRLPVPMHFII
DIYKQRKEQEEIETDSGKSTEGIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67402; Mature: 67402

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESES
CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
KVYLFSVKSGDLNRRDWDSTNPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEV
EEEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
KEEVRSNVSMFLGKLKTDDLSFSEWNGDRLADLVEQHMLREELLPKNCRSLLRKSLAMID
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
EPEVSFKHFSQLAISLTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNLESAFLSAEF
CCCHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TMLNSWEAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYCNNLYAISHAV
HHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
KPSCATDVNLKLFDVLGRLALTGCWSYWYLSQINDENVEAGKFFSEAVTKYQDSIKQLIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NNPILFTPYKDEQAIDLVLALWFLSLDHKHWRDINSWLSNMSREIYQMFKINDKYPTTIR
CCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKKIKEEFLPHCNFQ
HHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
VYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNKVYDMSAFQYSFW
EEEEECCCCCCCEEHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHH
PIILTGCRHYRLPVPMHFIIDIYKQRKEQEEIETDSGKSTEGIK
HHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESES
CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
KVYLFSVKSGDLNRRDWDSTNPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEV
EEEEEEECCCCCCCCCCCCCCCHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHH
KEEVRSNVSMFLGKLKTDDLSFSEWNGDRLADLVEQHMLREELLPKNCRSLLRKSLAMID
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
EPEVSFKHFSQLAISLTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNLESAFLSAEF
CCCHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TMLNSWEAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYCNNLYAISHAV
HHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
KPSCATDVNLKLFDVLGRLALTGCWSYWYLSQINDENVEAGKFFSEAVTKYQDSIKQLIV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NNPILFTPYKDEQAIDLVLALWFLSLDHKHWRDINSWLSNMSREIYQMFKINDKYPTTIR
CCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKKIKEEFLPHCNFQ
HHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
VYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNKVYDMSAFQYSFW
EEEEECCCCCCCEEHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHH
PIILTGCRHYRLPVPMHFIIDIYKQRKEQEEIETDSGKSTEGIK
HHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA