| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711735
Identifier: 59711735
GI number: 59711735
Start: 1249264
End: 1251153
Strand: Direct
Name: 59711735
Synonym: VF_1128
Alternate gene names: NA
Gene position: 1249264-1251153 (Clockwise)
Preceding gene: 59711734
Following gene: 59711738
Centisome position: 43.11
GC content: 33.17
Gene sequence:
>1890_bases ATGCAAATACGATTGAGTGAGATCCAGCTAAAAAACTTTAAATCTTTTGAAGATTTAACAATTTCACCTAATAACAGATT CAATATCATCATTGGTGAGAATAGCGCTGGTAAATCTACAATATTTGAAGGTATTCATTTATGGGAAAAGTGCTATGAAG CATTCATTTTAGCTTCAAGAAAAGGTTTTTATAAAGTTCGAGGCTCGACAAGTCGTTATGTTAATTATCAAGAATTAGAT TTTCTTAGACTTACTAGTGATAATGATTTATTTTTTCACTCAGGTCGAACAAGAAATGCAGAAATAACTGTGACCTTATG CGTTGATGGGGATCTATTTAATCTGGGATTCAAGATTTCACGACCTACTTCTATTTCAAATGCTTTTTTTCGAATTCAAC CTATAGAGCAAATTCAATTCTCTAGTTTTGCTGAAAAAATTGTGGCTGACGGAAAAACATTAGATGAGGCGATATTCATA TATCAAACAAGGCCCGTTGCTGGAGTTTTGCAATATGAACCTTATTTAAATGATGCTCAGGTTACAAAAAAAATACAGAA AGGGATCTCTCACGAAGTTTTGAGAAATAAGATTATTGCTAAACGAGAATCTATAGAGCAGCTAGAAGAAGCAATAACTA AAATATTAGGAAAAACAGTTAAATTTGACCTACCACCTAAAACTCGTGCAAGAACTGATGAATTTGTTTCAATAAAAGTC ACTATAGGTACTGGTAAAAAACAAGACTTACATTTACAAGGCAGTGGTTTTTTACAAATAGTAGAAATTCTATCAACAAT AGAATTTCTAGATGCTCCTTTAAAACTGTTACTTGTAGATGAGCCTGATTCACATATTCATACTAAATTACAATCAAACC TTATTAGTCATTTGCGAAGTATTCTTGATAATCAGTTTTTTATTATTAGCCATAATGACCAGTTTGTTACTAATGCAGGA GAAGGAGAAGTATTCTTTCTTAGTGAAGAGGCAAAGTTTGAAAAACAGCTTATTCCTATAGAGCACAGGAGCTTTGATAC TATTAAGCGTGCTCTAGGTGGAGTAATTTTATCATTAGAGCATCTTAATCAAGCAAAACACATAGCGTTCGTGGAAGGAA ATGATGATGCCGAGTACCTAAAGGCGATTAATGTAAAGCTAAAAGATATCACTGAAGTGAGCGGTTGTTTATCTGATGTC TCATTTTTCCCACTACGAGGCAAAGATAACATTCTTCAAAAAGTTGAATATAACAAACGAACATTGACTTCTATTTTGAA AGGGAAGACTTGGAACACTATTTTTGATAGAGATTTTTCTACAGATGAAGTTGATGCTGAACTGAAAAGACAAATTCAGG GTAAACGTTGTAACCCATTTAGCCACACAGGGTATTGTGTCGAATCGGTGTTGTTTTCCGAAACAACGATTCTAAAACGA TTTATCAATACTTTTGTAGATGATTTTCCAGTAGCAGATGTAAATGAGCAAATTGATACAGTGTTACATGACTCTATTAT ACAACCTATCAACGATCTTCATTCAGAGTTAAACCAAACGGTTGAAGGTCGATTTAATGGTCAAAAAAGGAATAGACCAG AGTTTTCAAATCTACAGTATGCCGATGTTATGCGCTCTTGGACAATAGATGGTGATTTTCAAACGGCTTTGGTGATGTCA AAACCTCTCATAAGTTTATTTGTTACTAAATTAGAAGAAAGTTTAGGTCGCTCATTGTTTCTTCGTACTTCCAATAATGA TGAAGAAATATCTTCAAAGCTTTTTCTCGCATATATTGCGTTTTTAAATGATATTAATGATCTTTATCCTTCTCTAAAAG AGCTGTTTGTTCAGTTAGGTGTTTTAGAGGAAAGGAATGAACAAGAATGA
Upstream 100 bases:
>100_bases TACCAGTGCCGATGCATTTTATTATTGATATTTATAAGCAGAGAAAAGAACAAGAAGAAATTGAAACTGATAGCGGAAAA AGCACTGAAGGAATTAAATA
Downstream 100 bases:
>100_bases CTTTAAGCTTAGCAAACTTAAAAGAGTAAAAAATATGAGAAAAAAGATAGAACAGGCACTTTTTTGTGATTTTTTACTAT CCTCCACTCGCCAATTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MQIRLSEIQLKNFKSFEDLTISPNNRFNIIIGENSAGKSTIFEGIHLWEKCYEAFILASRKGFYKVRGSTSRYVNYQELD FLRLTSDNDLFFHSGRTRNAEITVTLCVDGDLFNLGFKISRPTSISNAFFRIQPIEQIQFSSFAEKIVADGKTLDEAIFI YQTRPVAGVLQYEPYLNDAQVTKKIQKGISHEVLRNKIIAKRESIEQLEEAITKILGKTVKFDLPPKTRARTDEFVSIKV TIGTGKKQDLHLQGSGFLQIVEILSTIEFLDAPLKLLLVDEPDSHIHTKLQSNLISHLRSILDNQFFIISHNDQFVTNAG EGEVFFLSEEAKFEKQLIPIEHRSFDTIKRALGGVILSLEHLNQAKHIAFVEGNDDAEYLKAINVKLKDITEVSGCLSDV SFFPLRGKDNILQKVEYNKRTLTSILKGKTWNTIFDRDFSTDEVDAELKRQIQGKRCNPFSHTGYCVESVLFSETTILKR FINTFVDDFPVADVNEQIDTVLHDSIIQPINDLHSELNQTVEGRFNGQKRNRPEFSNLQYADVMRSWTIDGDFQTALVMS KPLISLFVTKLEESLGRSLFLRTSNNDEEISSKLFLAYIAFLNDINDLYPSLKELFVQLGVLEERNEQE
Sequences:
>Translated_629_residues MQIRLSEIQLKNFKSFEDLTISPNNRFNIIIGENSAGKSTIFEGIHLWEKCYEAFILASRKGFYKVRGSTSRYVNYQELD FLRLTSDNDLFFHSGRTRNAEITVTLCVDGDLFNLGFKISRPTSISNAFFRIQPIEQIQFSSFAEKIVADGKTLDEAIFI YQTRPVAGVLQYEPYLNDAQVTKKIQKGISHEVLRNKIIAKRESIEQLEEAITKILGKTVKFDLPPKTRARTDEFVSIKV TIGTGKKQDLHLQGSGFLQIVEILSTIEFLDAPLKLLLVDEPDSHIHTKLQSNLISHLRSILDNQFFIISHNDQFVTNAG EGEVFFLSEEAKFEKQLIPIEHRSFDTIKRALGGVILSLEHLNQAKHIAFVEGNDDAEYLKAINVKLKDITEVSGCLSDV SFFPLRGKDNILQKVEYNKRTLTSILKGKTWNTIFDRDFSTDEVDAELKRQIQGKRCNPFSHTGYCVESVLFSETTILKR FINTFVDDFPVADVNEQIDTVLHDSIIQPINDLHSELNQTVEGRFNGQKRNRPEFSNLQYADVMRSWTIDGDFQTALVMS KPLISLFVTKLEESLGRSLFLRTSNNDEEISSKLFLAYIAFLNDINDLYPSLKELFVQLGVLEERNEQE >Mature_629_residues MQIRLSEIQLKNFKSFEDLTISPNNRFNIIIGENSAGKSTIFEGIHLWEKCYEAFILASRKGFYKVRGSTSRYVNYQELD FLRLTSDNDLFFHSGRTRNAEITVTLCVDGDLFNLGFKISRPTSISNAFFRIQPIEQIQFSSFAEKIVADGKTLDEAIFI YQTRPVAGVLQYEPYLNDAQVTKKIQKGISHEVLRNKIIAKRESIEQLEEAITKILGKTVKFDLPPKTRARTDEFVSIKV TIGTGKKQDLHLQGSGFLQIVEILSTIEFLDAPLKLLLVDEPDSHIHTKLQSNLISHLRSILDNQFFIISHNDQFVTNAG EGEVFFLSEEAKFEKQLIPIEHRSFDTIKRALGGVILSLEHLNQAKHIAFVEGNDDAEYLKAINVKLKDITEVSGCLSDV SFFPLRGKDNILQKVEYNKRTLTSILKGKTWNTIFDRDFSTDEVDAELKRQIQGKRCNPFSHTGYCVESVLFSETTILKR FINTFVDDFPVADVNEQIDTVLHDSIIQPINDLHSELNQTVEGRFNGQKRNRPEFSNLQYADVMRSWTIDGDFQTALVMS KPLISLFVTKLEESLGRSLFLRTSNNDEEISSKLFLAYIAFLNDINDLYPSLKELFVQLGVLEERNEQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71918; Mature: 71918
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIRLSEIQLKNFKSFEDLTISPNNRFNIIIGENSAGKSTIFEGIHLWEKCYEAFILASR CCEEEHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC KGFYKVRGSTSRYVNYQELDFLRLTSDNDLFFHSGRTRNAEITVTLCVDGDLFNLGFKIS CCEEEECCCCCCEECHHHCEEEEEECCCCEEEECCCCCCCEEEEEEEECCCEEECCEEEC RPTSISNAFFRIQPIEQIQFSSFAEKIVADGKTLDEAIFIYQTRPVAGVLQYEPYLNDAQ CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCHHH VTKKIQKGISHEVLRNKIIAKRESIEQLEEAITKILGKTVKFDLPPKTRARTDEFVSIKV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEE TIGTGKKQDLHLQGSGFLQIVEILSTIEFLDAPLKLLLVDEPDSHIHTKLQSNLISHLRS EECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH ILDNQFFIISHNDQFVTNAGEGEVFFLSEEAKFEKQLIPIEHRSFDTIKRALGGVILSLE HHCCCEEEEECCCCEEECCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHEEEHH HLNQAKHIAFVEGNDDAEYLKAINVKLKDITEVSGCLSDVSFFPLRGKDNILQKVEYNKR HCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCHH TLTSILKGKTWNTIFDRDFSTDEVDAELKRQIQGKRCNPFSHTGYCVESVLFSETTILKR HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH FINTFVDDFPVADVNEQIDTVLHDSIIQPINDLHSELNQTVEGRFNGQKRNRPEFSNLQY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH ADVMRSWTIDGDFQTALVMSKPLISLFVTKLEESLGRSLFLRTSNNDEEISSKLFLAYIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH FLNDINDLYPSLKELFVQLGVLEERNEQE HHHHHHHHHHHHHHHHHHHCCHHCCCCCC >Mature Secondary Structure MQIRLSEIQLKNFKSFEDLTISPNNRFNIIIGENSAGKSTIFEGIHLWEKCYEAFILASR CCEEEHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC KGFYKVRGSTSRYVNYQELDFLRLTSDNDLFFHSGRTRNAEITVTLCVDGDLFNLGFKIS CCEEEECCCCCCEECHHHCEEEEEECCCCEEEECCCCCCCEEEEEEEECCCEEECCEEEC RPTSISNAFFRIQPIEQIQFSSFAEKIVADGKTLDEAIFIYQTRPVAGVLQYEPYLNDAQ CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCHHH VTKKIQKGISHEVLRNKIIAKRESIEQLEEAITKILGKTVKFDLPPKTRARTDEFVSIKV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEE TIGTGKKQDLHLQGSGFLQIVEILSTIEFLDAPLKLLLVDEPDSHIHTKLQSNLISHLRS EECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHH ILDNQFFIISHNDQFVTNAGEGEVFFLSEEAKFEKQLIPIEHRSFDTIKRALGGVILSLE HHCCCEEEEECCCCEEECCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHEEEHH HLNQAKHIAFVEGNDDAEYLKAINVKLKDITEVSGCLSDVSFFPLRGKDNILQKVEYNKR HCCCCCEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCHH TLTSILKGKTWNTIFDRDFSTDEVDAELKRQIQGKRCNPFSHTGYCVESVLFSETTILKR HHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH FINTFVDDFPVADVNEQIDTVLHDSIIQPINDLHSELNQTVEGRFNGQKRNRPEFSNLQY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH ADVMRSWTIDGDFQTALVMSKPLISLFVTKLEESLGRSLFLRTSNNDEEISSKLFLAYIA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH FLNDINDLYPSLKELFVQLGVLEERNEQE HHHHHHHHHHHHHHHHHHHCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA