| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711733
Identifier: 59711733
GI number: 59711733
Start: 1245777
End: 1247513
Strand: Direct
Name: 59711733
Synonym: VF_1126
Alternate gene names: NA
Gene position: 1245777-1247513 (Clockwise)
Preceding gene: 59711732
Following gene: 59711734
Centisome position: 42.99
GC content: 35.81
Gene sequence:
>1737_bases GTGGATGAGCTAAAAAGTGAATTGACCAAAGCTTACAAGGATGACTGTTTTTTTGAGGTCATCCAAGAAATTTATTATCA AGACAGAAAAGGTGAAAAGCTTCTGCTTAGCACTTTGGCTGAATTGCATAATGAAGGGAAATTAAACCTCGTAGAATTAT TCTACAACTTTAAAAATACCACTGAAAATTATGACTTTTTTTCAGTAAGGCGAGTTTTTGAAGAAGTTTTACCTAATATA AATGCTCAGGTAAAAGACGTTGCCGAATGTGTGAAACATCTTACGCTAGAAGCAGGCCAAGATATGGCCGCATATATGCT TTTGTCTCCATTTAAAGAATTTTGTAAAAAAGACACTGTTAGAACCAAAGCTCTCTTTGATATCGCTTTAACCAATATTG ATGAAGACTTTGACCATTTATCTACGGCGATTGAAGCAGGAGCGAGTATTGATGAAATCACTTACGTCAATCAAGCAATT GAACTGCTTACTCATGAAAATGAGCTAATACTACAAAGAGCCATATTTGCATTAGGTAGAATTAACTACCAAGATAAAAT GCTCTTGGAGCCAGTTGCAATAGCTATCATTAAATCATCAGTGTCTTCACCAAGTGATGTAATTTTAGCAACATCAATGC GAGCGTTGTTTGCAGTTGTTTCTCATTGTGAAGATTTAGAGAGTTTGTTCTTAGATTTTTTAAACACGCATTCGGAACAT TTAGGTGACCGTTATATTCATGCTGCTGCTGAAATACTATTCTTTGATGAGAAAAAACTAAGAGGTAATGTTGAACCTAA GTTGTTGAATATATGCTGTTATACCAAACCTGAAAATAAAGGTACTATTGATAAAATCGATTACTCATTAAAGCGCATAT TAGAACAAGGTAGCTTTGATGACTGTGTTGTATTTTTAGAGCGCTTCTTTGAATTAAACGGATATCAATTGTCTGTGAAG CATTTCGATAGCTTTGTTCGAGAGCTGCATAATCACCGAGATACTCACCTGTCCTCATTGCTTACCCGATGGTTGTTGTC AAAAAAAATAAAGCTAGGTAAATATGCTTCTGATATTCTTCGGGACTTAGATAAAGGTATTTCTATTGGTTTTGACCGTA CTCTCGTAGCCAAACAAAGCAAAGGCGTACATCTATTTTTGGCGAGAAAAGCTTGTGGGTGGTTTTTCAATCAGCCCAAA ACAGCAATCAGTTTAATTGAGTCGTTAATTCTTGATTCCCCTGAAGATGAATTAAATGATATTCAGCAACTCATATTTCA CCCTCTTTGTATAAGCTACCCAGGAAGTATTCGTGAACATCTGGAAGCATTGAAAGAGTCAAAAGAAGAAACGGTTAAAC AAATTGCATCTGGTGTGTTATCTGAATATGACGAATATCAAGTATCGGTAAAAGCAGCTTTTAAAATAAATGAATTAAGC CCGAGTGAACAAGATAGGCATACATATTGGCGGCATCATAATAAGTTAATGAGCGAATCCATGAAACAGGCTAGAAAAAA GTCGATTCTTACCTCTTTGTTTGCTGGTAATGAGTCGGTATTACTCTATGGAAATAAGTCGATTCACTATATACATCATG GTGAACAAAAGACTCGTCAGGAAATTCCACTTAGTGAAATAAGTACATCATTTGAATTTGCATCAATGCACAACCTTGAC CCGCATGGTTTAGAAAATATGATCTGGCAGTTTAAAGCGGAGGGCTGTACGTCATGA
Upstream 100 bases:
>100_bases GTAACGCCTTTTGTTCCAAAATCAGCACCAGTTTTGCTTGCCGTTGATGCGGGAGTTAATTGTTAATTATCCCAGAATAT CGTGATAGGAATTAGAAGCC
Downstream 100 bases:
>100_bases AATTAGTGATAAGACAATACTTAGCATCTTTAAAAGAACGAGGCGAGCTGGATGCTTTATTGCCCGATTTACTGTCACAA ATTGGCTTAGAAGTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MDELKSELTKAYKDDCFFEVIQEIYYQDRKGEKLLLSTLAELHNEGKLNLVELFYNFKNTTENYDFFSVRRVFEEVLPNI NAQVKDVAECVKHLTLEAGQDMAAYMLLSPFKEFCKKDTVRTKALFDIALTNIDEDFDHLSTAIEAGASIDEITYVNQAI ELLTHENELILQRAIFALGRINYQDKMLLEPVAIAIIKSSVSSPSDVILATSMRALFAVVSHCEDLESLFLDFLNTHSEH LGDRYIHAAAEILFFDEKKLRGNVEPKLLNICCYTKPENKGTIDKIDYSLKRILEQGSFDDCVVFLERFFELNGYQLSVK HFDSFVRELHNHRDTHLSSLLTRWLLSKKIKLGKYASDILRDLDKGISIGFDRTLVAKQSKGVHLFLARKACGWFFNQPK TAISLIESLILDSPEDELNDIQQLIFHPLCISYPGSIREHLEALKESKEETVKQIASGVLSEYDEYQVSVKAAFKINELS PSEQDRHTYWRHHNKLMSESMKQARKKSILTSLFAGNESVLLYGNKSIHYIHHGEQKTRQEIPLSEISTSFEFASMHNLD PHGLENMIWQFKAEGCTS
Sequences:
>Translated_578_residues MDELKSELTKAYKDDCFFEVIQEIYYQDRKGEKLLLSTLAELHNEGKLNLVELFYNFKNTTENYDFFSVRRVFEEVLPNI NAQVKDVAECVKHLTLEAGQDMAAYMLLSPFKEFCKKDTVRTKALFDIALTNIDEDFDHLSTAIEAGASIDEITYVNQAI ELLTHENELILQRAIFALGRINYQDKMLLEPVAIAIIKSSVSSPSDVILATSMRALFAVVSHCEDLESLFLDFLNTHSEH LGDRYIHAAAEILFFDEKKLRGNVEPKLLNICCYTKPENKGTIDKIDYSLKRILEQGSFDDCVVFLERFFELNGYQLSVK HFDSFVRELHNHRDTHLSSLLTRWLLSKKIKLGKYASDILRDLDKGISIGFDRTLVAKQSKGVHLFLARKACGWFFNQPK TAISLIESLILDSPEDELNDIQQLIFHPLCISYPGSIREHLEALKESKEETVKQIASGVLSEYDEYQVSVKAAFKINELS PSEQDRHTYWRHHNKLMSESMKQARKKSILTSLFAGNESVLLYGNKSIHYIHHGEQKTRQEIPLSEISTSFEFASMHNLD PHGLENMIWQFKAEGCTS >Mature_578_residues MDELKSELTKAYKDDCFFEVIQEIYYQDRKGEKLLLSTLAELHNEGKLNLVELFYNFKNTTENYDFFSVRRVFEEVLPNI NAQVKDVAECVKHLTLEAGQDMAAYMLLSPFKEFCKKDTVRTKALFDIALTNIDEDFDHLSTAIEAGASIDEITYVNQAI ELLTHENELILQRAIFALGRINYQDKMLLEPVAIAIIKSSVSSPSDVILATSMRALFAVVSHCEDLESLFLDFLNTHSEH LGDRYIHAAAEILFFDEKKLRGNVEPKLLNICCYTKPENKGTIDKIDYSLKRILEQGSFDDCVVFLERFFELNGYQLSVK HFDSFVRELHNHRDTHLSSLLTRWLLSKKIKLGKYASDILRDLDKGISIGFDRTLVAKQSKGVHLFLARKACGWFFNQPK TAISLIESLILDSPEDELNDIQQLIFHPLCISYPGSIREHLEALKESKEETVKQIASGVLSEYDEYQVSVKAAFKINELS PSEQDRHTYWRHHNKLMSESMKQARKKSILTSLFAGNESVLLYGNKSIHYIHHGEQKTRQEIPLSEISTSFEFASMHNLD PHGLENMIWQFKAEGCTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66367; Mature: 66367
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELKSELTKAYKDDCFFEVIQEIYYQDRKGEKLLLSTLAELHNEGKLNLVELFYNFKNT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC TENYDFFSVRRVFEEVLPNINAQVKDVAECVKHLTLEAGQDMAAYMLLSPFKEFCKKDTV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RTKALFDIALTNIDEDFDHLSTAIEAGASIDEITYVNQAIELLTHENELILQRAIFALGR HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC INYQDKMLLEPVAIAIIKSSVSSPSDVILATSMRALFAVVSHCEDLESLFLDFLNTHSEH CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDRYIHAAAEILFFDEKKLRGNVEPKLLNICCYTKPENKGTIDKIDYSLKRILEQGSFD HHHHHHHHHHHHHHCCCHHHCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCH DCVVFLERFFELNGYQLSVKHFDSFVRELHNHRDTHLSSLLTRWLLSKKIKLGKYASDIL HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLDKGISIGFDRTLVAKQSKGVHLFLARKACGWFFNQPKTAISLIESLILDSPEDELND HHHHHCCCCCCCCHHHCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH IQQLIFHPLCISYPGSIREHLEALKESKEETVKQIASGVLSEYDEYQVSVKAAFKINELS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCC PSEQDRHTYWRHHNKLMSESMKQARKKSILTSLFAGNESVLLYGNKSIHYIHHGEQKTRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHH EIPLSEISTSFEFASMHNLDPHGLENMIWQFKAEGCTS CCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MDELKSELTKAYKDDCFFEVIQEIYYQDRKGEKLLLSTLAELHNEGKLNLVELFYNFKNT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC TENYDFFSVRRVFEEVLPNINAQVKDVAECVKHLTLEAGQDMAAYMLLSPFKEFCKKDTV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RTKALFDIALTNIDEDFDHLSTAIEAGASIDEITYVNQAIELLTHENELILQRAIFALGR HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC INYQDKMLLEPVAIAIIKSSVSSPSDVILATSMRALFAVVSHCEDLESLFLDFLNTHSEH CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDRYIHAAAEILFFDEKKLRGNVEPKLLNICCYTKPENKGTIDKIDYSLKRILEQGSFD HHHHHHHHHHHHHHCCCHHHCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCH DCVVFLERFFELNGYQLSVKHFDSFVRELHNHRDTHLSSLLTRWLLSKKIKLGKYASDIL HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLDKGISIGFDRTLVAKQSKGVHLFLARKACGWFFNQPKTAISLIESLILDSPEDELND HHHHHCCCCCCCCHHHCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHH IQQLIFHPLCISYPGSIREHLEALKESKEETVKQIASGVLSEYDEYQVSVKAAFKINELS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCC PSEQDRHTYWRHHNKLMSESMKQARKKSILTSLFAGNESVLLYGNKSIHYIHHGEQKTRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHH EIPLSEISTSFEFASMHNLDPHGLENMIWQFKAEGCTS CCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA