| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is lolD [C]
Identifier: 59711714
GI number: 59711714
Start: 1220346
End: 1221029
Strand: Direct
Name: lolD [C]
Synonym: VF_1107
Alternate gene names: 59711714
Gene position: 1220346-1221029 (Clockwise)
Preceding gene: 59711713
Following gene: 59711715
Centisome position: 42.12
GC content: 39.91
Gene sequence:
>684_bases ATGACAATTCAAATTAAGCAATTATGCAAAACATACAATCAAGATACAGAGTTTCCAGTTCACGCCGTTGATCATCTCGA TCTTACTATTGAGCAGGGGGAGTTTGTTGCTGTTATTGGTCCATCAGGTTCAGGCAAAACCACCTTACTTAATATGCTAG GCGGTATTGATGCCGTAACGTCAGGAAAAGTGAGCATTGATAATCATGAATTAACCGAAATGGATGAAAAGCAACTGATT GAGTTTCGACGAGACAATATCGGCTTTATTTTTCAAGACTACAGTTTATTACCTGTTTTAACTGCATTAGAGAATGTTGA GTTTGTTATGCTGTTACAGGGTCACGAAGAGGCTGAATGTAAATTACGAGCACAGCAATTATTAAAGCGAGTTGGACTAG AAGATCAACAGCACAAGCGACCAGCCCAATTATCTGGCGGTCAACAACAACGAGTAGCGGTGGCCAGAGCATTAGCCCCA CGACCTCGTTTTATTATGGCAGATGAGCCAACGGCAAATTTAGATGCAAAGAGTACCGCAGAGCTGTTAGATATTATGGA AGCGCTAAACCAAGAAGAGAATACAACGTTTATTTTTTCTACCCATGATTCTCGCGTATTTGAAAGAGCCAAAAGAATCA TCGTGTTTGAAGATGGCCAATTAAAAGAAGATAAACAGCAATAA
Upstream 100 bases:
>100_bases GGTCTTCTTTGTTAGTGTGTGTGCGGGGTTATATCCAGCGCACCAGATCATTAAAAAGAATCCTGTTCAAGCAATGGCAG AAAAGCAATAAGGTGAGTGT
Downstream 100 bases:
>100_bases TAATGTGAGATAGATCTTGACCTAAATCTGATAGTACATAAACTCCAATGATTAGTTTTTATTAAAGAAAGACGTAAGAG TTTGTTCTTACGCCTGATTC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTIQIKQLCKTYNQDTEFPVHAVDHLDLTIEQGEFVAVIGPSGSGKTTLLNMLGGIDAVTSGKVSIDNHELTEMDEKQLI EFRRDNIGFIFQDYSLLPVLTALENVEFVMLLQGHEEAECKLRAQQLLKRVGLEDQQHKRPAQLSGGQQQRVAVARALAP RPRFIMADEPTANLDAKSTAELLDIMEALNQEENTTFIFSTHDSRVFERAKRIIVFEDGQLKEDKQQ
Sequences:
>Translated_227_residues MTIQIKQLCKTYNQDTEFPVHAVDHLDLTIEQGEFVAVIGPSGSGKTTLLNMLGGIDAVTSGKVSIDNHELTEMDEKQLI EFRRDNIGFIFQDYSLLPVLTALENVEFVMLLQGHEEAECKLRAQQLLKRVGLEDQQHKRPAQLSGGQQQRVAVARALAP RPRFIMADEPTANLDAKSTAELLDIMEALNQEENTTFIFSTHDSRVFERAKRIIVFEDGQLKEDKQQ >Mature_226_residues TIQIKQLCKTYNQDTEFPVHAVDHLDLTIEQGEFVAVIGPSGSGKTTLLNMLGGIDAVTSGKVSIDNHELTEMDEKQLIE FRRDNIGFIFQDYSLLPVLTALENVEFVMLLQGHEEAECKLRAQQLLKRVGLEDQQHKRPAQLSGGQQQRVAVARALAPR PRFIMADEPTANLDAKSTAELLDIMEALNQEENTTFIFSTHDSRVFERAKRIIVFEDGQLKEDKQQ
Specific function: Part Of The Abc Transporter Complex Lolcde Involved In The Translocation Of Mature Outer Membrane-Directed Lipoproteins, From The Inner Membrane To The Periplasmic Chaperone, Lola. Responsible For The Formation Of The Lola-Lipoprotein Complex In An ATP-De
COG id: COG1136
COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=32.0197044334975, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI215820660, Length=191, Percent_Identity=32.4607329842932, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI20143975, Length=191, Percent_Identity=32.4607329842932, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27477115, Length=223, Percent_Identity=30.9417040358744, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI45446740, Length=224, Percent_Identity=29.0178571428571, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI47078218, Length=224, Percent_Identity=29.0178571428571, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI27262624, Length=223, Percent_Identity=30.0448430493274, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI27262626, Length=223, Percent_Identity=30.0448430493274, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI153792144, Length=223, Percent_Identity=28.6995515695067, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI21536376, Length=204, Percent_Identity=31.3725490196078, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI46592915, Length=195, Percent_Identity=32.8205128205128, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592964, Length=195, Percent_Identity=32.8205128205128, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592898, Length=195, Percent_Identity=32.8205128205128, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI46592978, Length=195, Percent_Identity=32.8205128205128, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI46592971, Length=195, Percent_Identity=32.8205128205128, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI46592956, Length=195, Percent_Identity=32.8205128205128, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI9955963, Length=204, Percent_Identity=30.3921568627451, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI105990541, Length=182, Percent_Identity=31.3186813186813, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI156105685, Length=231, Percent_Identity=32.034632034632, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI171184400, Length=230, Percent_Identity=29.1304347826087, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=29.4392523364486, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=29.4392523364486, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI9955968, Length=223, Percent_Identity=30.4932735426009, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI9955966, Length=223, Percent_Identity=30.4932735426009, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI45243524, Length=223, Percent_Identity=30.4932735426009, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI42741659, Length=223, Percent_Identity=28.2511210762332, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI150417984, Length=184, Percent_Identity=32.6086956521739, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI31657092, Length=204, Percent_Identity=31.3725490196078, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI9961252, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI4505771, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI9961250, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI27436953, Length=221, Percent_Identity=27.6018099547511, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=27.3913043478261, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI148612844, Length=211, Percent_Identity=30.3317535545024, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI73747915, Length=211, Percent_Identity=27.9620853080569, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI9665248, Length=204, Percent_Identity=25.9803921568627, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI42490749, Length=209, Percent_Identity=27.7511961722488, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI21536378, Length=217, Percent_Identity=29.4930875576037, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI110832835, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI110832837, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI62526033, Length=200, Percent_Identity=26, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI110832839, Length=205, Percent_Identity=27.3170731707317, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI87081834, Length=219, Percent_Identity=40.1826484018265, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1786703, Length=222, Percent_Identity=41.8918918918919, Blast_Score=179, Evalue=1e-46, Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=43.37899543379, Blast_Score=174, Evalue=4e-45, Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=40.2654867256637, Blast_Score=157, Evalue=4e-40, Organism=Escherichia coli, GI1787370, Length=204, Percent_Identity=38.2352941176471, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=40.5286343612335, Blast_Score=151, Evalue=3e-38, Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=36.036036036036, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI1787712, Length=205, Percent_Identity=37.0731707317073, Blast_Score=143, Evalue=8e-36, Organism=Escherichia coli, GI87081709, Length=222, Percent_Identity=34.2342342342342, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790544, Length=238, Percent_Identity=38.655462184874, Blast_Score=134, Evalue=4e-33, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=34.6491228070175, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI1789873, Length=220, Percent_Identity=33.6363636363636, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789672, Length=224, Percent_Identity=34.8214285714286, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI87082267, Length=218, Percent_Identity=31.651376146789, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI87081791, Length=224, Percent_Identity=35.2678571428571, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787089, Length=204, Percent_Identity=38.2352941176471, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1789032, Length=201, Percent_Identity=35.3233830845771, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1787164, Length=223, Percent_Identity=36.7713004484305, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1786872, Length=189, Percent_Identity=37.037037037037, Blast_Score=126, Evalue=9e-31, Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=38.3495145631068, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=30.9417040358744, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI1789963, Length=220, Percent_Identity=36.3636363636364, Blast_Score=122, Evalue=1e-29, Organism=Escherichia coli, GI1786563, Length=201, Percent_Identity=36.318407960199, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI1786319, Length=225, Percent_Identity=30.6666666666667, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1787547, Length=231, Percent_Identity=33.7662337662338, Blast_Score=108, Evalue=2e-25, Organism=Escherichia coli, GI145693107, Length=239, Percent_Identity=33.4728033472803, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788506, Length=213, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788450, Length=202, Percent_Identity=33.6633663366337, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1789962, Length=209, Percent_Identity=33.4928229665072, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=31.7307692307692, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790525, Length=210, Percent_Identity=31.9047619047619, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI48994883, Length=214, Percent_Identity=31.7757009345794, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790534, Length=212, Percent_Identity=31.1320754716981, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1787758, Length=226, Percent_Identity=30.5309734513274, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789864, Length=218, Percent_Identity=29.3577981651376, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787548, Length=242, Percent_Identity=28.9256198347107, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787500, Length=208, Percent_Identity=32.2115384615385, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1790162, Length=211, Percent_Identity=30.3317535545024, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI48994943, Length=200, Percent_Identity=30.5, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI87082268, Length=203, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=32.0175438596491, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1788644, Length=192, Percent_Identity=31.7708333333333, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789593, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787759, Length=217, Percent_Identity=29.4930875576037, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI48994997, Length=196, Percent_Identity=32.1428571428571, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=27.8260869565217, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1786981, Length=195, Percent_Identity=29.2307692307692, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1789586, Length=183, Percent_Identity=32.2404371584699, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1788210, Length=207, Percent_Identity=29.4685990338164, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790190, Length=217, Percent_Identity=29.4930875576037, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=27.4774774774775, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1787112, Length=226, Percent_Identity=27.4336283185841, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789890, Length=214, Percent_Identity=30.8411214953271, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787143, Length=210, Percent_Identity=29.5238095238095, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788897, Length=235, Percent_Identity=28.0851063829787, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788053, Length=156, Percent_Identity=31.4102564102564, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786698, Length=208, Percent_Identity=24.5192307692308, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=30.0884955752212, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786345, Length=191, Percent_Identity=29.8429319371728, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790739, Length=226, Percent_Identity=26.5486725663717, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786654, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787792, Length=207, Percent_Identity=28.0193236714976, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787113, Length=204, Percent_Identity=32.3529411764706, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788540, Length=227, Percent_Identity=29.5154185022026, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786653, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788165, Length=178, Percent_Identity=29.2134831460674, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787041, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=23.6111111111111, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI2367384, Length=208, Percent_Identity=27.4038461538462, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI212646699, Length=230, Percent_Identity=32.6086956521739, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17543740, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193202349, Length=219, Percent_Identity=32.4200913242009, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71983516, Length=218, Percent_Identity=30.2752293577982, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71983523, Length=218, Percent_Identity=30.2752293577982, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71983510, Length=218, Percent_Identity=30.2752293577982, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17541710, Length=227, Percent_Identity=30.8370044052863, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI115533608, Length=202, Percent_Identity=27.7227722772277, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17510237, Length=201, Percent_Identity=26.865671641791, Blast_Score=90, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17558664, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565938, Length=224, Percent_Identity=29.9107142857143, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71996809, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193211017, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193211015, Length=206, Percent_Identity=32.0388349514563, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25146777, Length=207, Percent_Identity=32.8502415458937, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533592, Length=210, Percent_Identity=34.2857142857143, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17511077, Length=231, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17567265, Length=223, Percent_Identity=29.5964125560538, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115535101, Length=223, Percent_Identity=30.4932735426009, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115534520, Length=211, Percent_Identity=27.4881516587678, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17569145, Length=208, Percent_Identity=28.8461538461538, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71992290, Length=234, Percent_Identity=29.0598290598291, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71992285, Length=227, Percent_Identity=29.5154185022026, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI115532730, Length=200, Percent_Identity=29.5, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17567269, Length=211, Percent_Identity=29.8578199052133, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17569143, Length=209, Percent_Identity=30.1435406698565, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565586, Length=236, Percent_Identity=27.1186440677966, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71996550, Length=204, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI193208177, Length=211, Percent_Identity=28.9099526066351, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71988343, Length=211, Percent_Identity=27.9620853080569, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17533971, Length=221, Percent_Identity=28.0542986425339, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193209708, Length=207, Percent_Identity=29.951690821256, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71984940, Length=222, Percent_Identity=29.2792792792793, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17552010, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17551700, Length=205, Percent_Identity=27.8048780487805, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551702, Length=205, Percent_Identity=27.8048780487805, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=201, Percent_Identity=29.3532338308458, Blast_Score=85, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323959, Length=206, Percent_Identity=30.0970873786408, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324985, Length=228, Percent_Identity=27.6315789473684, Blast_Score=82, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319856, Length=205, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323217, Length=223, Percent_Identity=30.0448430493274, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322177, Length=161, Percent_Identity=31.055900621118, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322640, Length=226, Percent_Identity=28.7610619469027, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324585, Length=166, Percent_Identity=30.7228915662651, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322980, Length=227, Percent_Identity=24.6696035242291, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574150, Length=200, Percent_Identity=30.5, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI116007328, Length=200, Percent_Identity=30.5, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24666092, Length=223, Percent_Identity=28.6995515695067, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24641565, Length=224, Percent_Identity=32.1428571428571, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI28574744, Length=169, Percent_Identity=34.3195266272189, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI85726357, Length=231, Percent_Identity=30.7359307359307, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574533, Length=193, Percent_Identity=31.6062176165803, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24648314, Length=220, Percent_Identity=26.8181818181818, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI161076682, Length=194, Percent_Identity=29.8969072164948, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI161076684, Length=194, Percent_Identity=29.8969072164948, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581617, Length=194, Percent_Identity=29.8969072164948, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581615, Length=194, Percent_Identity=29.8969072164948, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581407, Length=197, Percent_Identity=31.4720812182741, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI19920532, Length=205, Percent_Identity=28.780487804878, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24580930, Length=205, Percent_Identity=28.780487804878, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI21357907, Length=205, Percent_Identity=30.2439024390244, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI45552199, Length=201, Percent_Identity=30.8457711442786, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI85724858, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI85724856, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580547, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580551, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580549, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580545, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI85724864, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24580555, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI85816269, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24580553, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI85725262, Length=200, Percent_Identity=27.5, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI281363262, Length=212, Percent_Identity=28.7735849056604, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI24653245, Length=212, Percent_Identity=28.7735849056604, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI24581191, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581189, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581193, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581195, Length=199, Percent_Identity=26.6331658291457, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17647959, Length=206, Percent_Identity=29.6116504854369, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17647219, Length=172, Percent_Identity=31.3953488372093, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI45552805, Length=172, Percent_Identity=31.3953488372093, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=31.25, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24581409, Length=192, Percent_Identity=31.25, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24643674, Length=204, Percent_Identity=25.9803921568627, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI116007184, Length=207, Percent_Identity=28.5024154589372, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221500365, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221512771, Length=224, Percent_Identity=23.6607142857143, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI23397593, Length=209, Percent_Identity=30.622009569378, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571209, Length=221, Percent_Identity=24.8868778280543, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=28.5067873303167, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136592, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24662800, Length=199, Percent_Identity=27.1356783919598, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI28571871, Length=182, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920928, Length=205, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24650853, Length=200, Percent_Identity=25.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573573, Length=199, Percent_Identity=24.6231155778894, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573571, Length=199, Percent_Identity=24.6231155778894, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582014, Length=219, Percent_Identity=23.7442922374429, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582012, Length=219, Percent_Identity=23.7442922374429, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650855, Length=201, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550390, Length=224, Percent_Identity=25, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281362751, Length=199, Percent_Identity=25.6281407035176, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 25607; Mature: 25476
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQIKQLCKTYNQDTEFPVHAVDHLDLTIEQGEFVAVIGPSGSGKTTLLNMLGGIDAVT CEEEHHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCC SGKVSIDNHELTEMDEKQLIEFRRDNIGFIFQDYSLLPVLTALENVEFVMLLQGHEEAEC CCEEEECCCHHHHCCHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEECCCHHHH KLRAQQLLKRVGLEDQQHKRPAQLSGGQQQRVAVARALAPRPRFIMADEPTANLDAKSTA HHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH ELLDIMEALNQEENTTFIFSTHDSRVFERAKRIIVFEDGQLKEDKQQ HHHHHHHHHCCCCCEEEEEECCCHHHHHHHCEEEEEECCCCCCCCCC >Mature Secondary Structure TIQIKQLCKTYNQDTEFPVHAVDHLDLTIEQGEFVAVIGPSGSGKTTLLNMLGGIDAVT EEEHHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCC SGKVSIDNHELTEMDEKQLIEFRRDNIGFIFQDYSLLPVLTALENVEFVMLLQGHEEAEC CCEEEECCCHHHHCCHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEECCCHHHH KLRAQQLLKRVGLEDQQHKRPAQLSGGQQQRVAVARALAPRPRFIMADEPTANLDAKSTA HHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHH ELLDIMEALNQEENTTFIFSTHDSRVFERAKRIIVFEDGQLKEDKQQ HHHHHHHHHCCCCCEEEEEECCCHHHHHHHCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087; 11402022; 12150914 [H]