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The map label for this gene is ybjZ [C]

Identifier: 59711713

GI number: 59711713

Start: 1219119

End: 1220336

Strand: Direct

Name: ybjZ [C]

Synonym: VF_1106

Alternate gene names: 59711713

Gene position: 1219119-1220336 (Clockwise)

Preceding gene: 59711712

Following gene: 59711714

Centisome position: 42.07

GC content: 39.57

Gene sequence:

>1218_bases
ATGCTGCTTAAATTAGCGTGGCGTAATGTGTGGCGCAATAAAATGAGAACCTCAATCATGCTGGGCGCTATGATCTTCGG
TGTCGTAGGCGTGATTTTAATGATGGGGTTCATGTCTGGCTTTATCGATAATATGGTGAAAAATACCATTCAGTGGCAAA
CCAGCCATATTCAAATTCATCAAAAGAATTATGCGTTAAATCCGGATATCAATCTTGTTATTGATGAAGAAAAGGAAATC
ACTCCGCTATTAAATGATTCCTCAGACGTGAAAGCATGGTCAAGTCGTACTTTAGTTAACGGCATGATAGCGTCAGCACG
AAGTACCAGAGGCATAAAGATAAATGGCATCAATCTTCAAATGGAGAAAAAAATAACCCCGTTATCGGCACATATCATTG
ATGGTGAATGGCTAAGTGAAACTGGGCGAAATCCCATTTTAGTATCACAAAAAACCGCAGAGCGATTAAAACTGCGCGTG
GGTTCTAAAGTCGTGCTTACTTTTAGTGATACGACAGGCGAAGTTACTGGAGCTGCGTTTAGAGTCAGTGGCATATTTAA
AACATCGTCGAGCACGTTTGATGATGCCAACACTTACGTTCGTAAAGCAGATTTACAGAAAGTTGGAAAAGTATTTCAAG
ATCATGAAATAGCGATTTTATTAAACGACAATACAAAAGTAGAGGCGTTTAGAGATCACTTAATAACAAATATAAATTCA
GATAATAGTGTGCAAGATTGGCTGCAATTACAGCCTATTTTGTCAACGATGATGAGTTCGATGAACGCTGGTAATCAAGT
TATTTTAGTCATTTTTATTGTCGCAATGGGCTTTGGGATCATTAATATTTTATTGATGTCCGTGTTTGAGCGCACTCGAG
AGTTTGGTGTTCTGATGGCCGTTGGCATGAAGAAAGATCGGATTCGTTATCTAATTATTTTGGAGTCTGGATTCCTAGGG
TTATTAGGAGGAGGGATAGGAGTACTGCTGTCCATATTATGCATAGCGGTGTTCAACCATACCGGTATTCCACTAGAGTC
CATGGCACAAGGCCTTAATGCATTTGGTATTGATTCGGTACTTTATCCTAGTATTTCATGGCATCAATACGCAGTGGTAT
CCATTATGGTCTTCTTTGTTAGTGTGTGTGCGGGGTTATATCCAGCGCACCAGATCATTAAAAAGAATCCTGTTCAAGCA
ATGGCAGAAAAGCAATAA

Upstream 100 bases:

>100_bases
CAAATGTTGATTGTTACAGGTTTACTGCTTTTATGCCTATTATATCCATTATGGCGTGTTTATCACCTCGATATTGTTAC
TGCATTAAAAGGAGGTTCTC

Downstream 100 bases:

>100_bases
GGTGAGTGTATGACAATTCAAATTAAGCAATTATGCAAAACATACAATCAAGATACAGAGTTTCCAGTTCACGCCGTTGA
TCATCTCGATCTTACTATTG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLLKLAWRNVWRNKMRTSIMLGAMIFGVVGVILMMGFMSGFIDNMVKNTIQWQTSHIQIHQKNYALNPDINLVIDEEKEI
TPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKINGINLQMEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRV
GSKVVLTFSDTTGEVTGAAFRVSGIFKTSSSTFDDANTYVRKADLQKVGKVFQDHEIAILLNDNTKVEAFRDHLITNINS
DNSVQDWLQLQPILSTMMSSMNAGNQVILVIFIVAMGFGIINILLMSVFERTREFGVLMAVGMKKDRIRYLIILESGFLG
LLGGGIGVLLSILCIAVFNHTGIPLESMAQGLNAFGIDSVLYPSISWHQYAVVSIMVFFVSVCAGLYPAHQIIKKNPVQA
MAEKQ

Sequences:

>Translated_405_residues
MLLKLAWRNVWRNKMRTSIMLGAMIFGVVGVILMMGFMSGFIDNMVKNTIQWQTSHIQIHQKNYALNPDINLVIDEEKEI
TPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKINGINLQMEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRV
GSKVVLTFSDTTGEVTGAAFRVSGIFKTSSSTFDDANTYVRKADLQKVGKVFQDHEIAILLNDNTKVEAFRDHLITNINS
DNSVQDWLQLQPILSTMMSSMNAGNQVILVIFIVAMGFGIINILLMSVFERTREFGVLMAVGMKKDRIRYLIILESGFLG
LLGGGIGVLLSILCIAVFNHTGIPLESMAQGLNAFGIDSVLYPSISWHQYAVVSIMVFFVSVCAGLYPAHQIIKKNPVQA
MAEKQ
>Mature_405_residues
MLLKLAWRNVWRNKMRTSIMLGAMIFGVVGVILMMGFMSGFIDNMVKNTIQWQTSHIQIHQKNYALNPDINLVIDEEKEI
TPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKINGINLQMEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRV
GSKVVLTFSDTTGEVTGAAFRVSGIFKTSSSTFDDANTYVRKADLQKVGKVFQDHEIAILLNDNTKVEAFRDHLITNINS
DNSVQDWLQLQPILSTMMSSMNAGNQVILVIFIVAMGFGIINILLMSVFERTREFGVLMAVGMKKDRIRYLIILESGFLG
LLGGGIGVLLSILCIAVFNHTGIPLESMAQGLNAFGIDSVLYPSISWHQYAVVSIMVFFVSVCAGLYPAHQIIKKNPVQA
MAEKQ

Specific function: Unknown

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44928; Mature: 44928

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKLAWRNVWRNKMRTSIMLGAMIFGVVGVILMMGFMSGFIDNMVKNTIQWQTSHIQIH
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
QKNYALNPDINLVIDEEKEITPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKINGINLQ
ECCEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
MEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRVGSKVVLTFSDTTGEVTGAAF
ECCCCCCCEEEEECCHHHHHCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
RVSGIFKTSSSTFDDANTYVRKADLQKVGKVFQDHEIAILLNDNTKVEAFRDHLITNINS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
DNSVQDWLQLQPILSTMMSSMNAGNQVILVIFIVAMGFGIINILLMSVFERTREFGVLMA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VGMKKDRIRYLIILESGFLGLLGGGIGVLLSILCIAVFNHTGIPLESMAQGLNAFGIDSV
ECCCCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHH
LYPSISWHQYAVVSIMVFFVSVCAGLYPAHQIIKKNPVQAMAEKQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MLLKLAWRNVWRNKMRTSIMLGAMIFGVVGVILMMGFMSGFIDNMVKNTIQWQTSHIQIH
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
QKNYALNPDINLVIDEEKEITPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKINGINLQ
ECCEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
MEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRVGSKVVLTFSDTTGEVTGAAF
ECCCCCCCEEEEECCHHHHHCCCCCEEEEHHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
RVSGIFKTSSSTFDDANTYVRKADLQKVGKVFQDHEIAILLNDNTKVEAFRDHLITNINS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCC
DNSVQDWLQLQPILSTMMSSMNAGNQVILVIFIVAMGFGIINILLMSVFERTREFGVLMA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VGMKKDRIRYLIILESGFLGLLGGGIGVLLSILCIAVFNHTGIPLESMAQGLNAFGIDSV
ECCCCCCEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHH
LYPSISWHQYAVVSIMVFFVSVCAGLYPAHQIIKKNPVQAMAEKQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]