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The map label for this gene is 59711707

Identifier: 59711707

GI number: 59711707

Start: 1214495

End: 1215283

Strand: Reverse

Name: 59711707

Synonym: VF_1100

Alternate gene names: NA

Gene position: 1215283-1214495 (Counterclockwise)

Preceding gene: 59711708

Following gene: 59711706

Centisome position: 41.94

GC content: 38.53

Gene sequence:

>789_bases
GTGAATTCCCAAAACATAAAAACCATCATTGGCTATGGTTCTCCGCAAGCGAACTCCTTATATTCGATGGCGGCTCTGGC
TAAATTGAAACAGTGGCATCTTCATTTTTATGTGGATCATATTCCATCCTATTTAAAAGAAAATCCAATTGGTAATTATC
GAGCGGCTTTAGAATTAGGCGCTAAGATCATTCCTCTAAATAAGTTAGAACACGCCAAAGACGACGATGGTTCTACTACT
TCATCTGCTGAATACATTTGTAAGATACGACAACCAAAAGAAGATGAAATTTATATTCCTGAAGGTGGTCGTTGTCGTTT
AGCTGAAAGTGGTGTCCAGAAGCTAGCAGAAGAAGTATTAGCTTGGAAAAAAGAAGCAAATATAGAGCACCTAACTGTCG
CATTACCATCAGGAACAGGAACCACCGCACTATTTTTACATAAACACTTAAAACCTCACGACGTTAAGGTTATTACGTGT
TCTTGTGTTGGCGGCGATGAGTATCTTGAAAAACAATTTTATCAATTAGGTGAAACCGATTTCCCTGAAGTTCTGACCCC
AGAGAAAAAACACCATTTTGGTAAACTATATCGAGAAAACTACGAGATCTGGAAAGAGCTATATCAACAGACTCAAGTTG
AATTCGAGTTATTGTATGACCCTCTCATGTGGCGCTGTTTAACTGACTGGCTACCTAAAAATACCGACCAGACCTTAATG
TATATTCACCAAGGTGGATTACTTGGGAATGAAAGTATGCTTCCAAGATACAAACGAAAGTTTGACTAA

Upstream 100 bases:

>100_bases
CATGACTTTAATGGTACGCGCTTTTATCTAAAACGTGATGACCTACTCCACCCTCAATTCTCAGGTAACAAAGCTCGAAA
ATTCATGGGGCTGCTAGAGA

Downstream 100 bases:

>100_bases
TTTTAATATTAATATATATAGCTGTATAAAAATTATCTTTAGGACTTCTGATGAAAATCAAACCATTTCTATTTGGCCTT
ATTGTTTTAGCAAACAATGC

Product: D-cysteine desulfhydrase-like protein

Products: NA

Alternate protein names: 1-Aminocyclopropane-1-Carboxylate Deaminase-Like Protein; D-Cysteine Desulfhydrase Family Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNSQNIKTIIGYGSPQANSLYSMAALAKLKQWHLHFYVDHIPSYLKENPIGNYRAALELGAKIIPLNKLEHAKDDDGSTT
SSAEYICKIRQPKEDEIYIPEGGRCRLAESGVQKLAEEVLAWKKEANIEHLTVALPSGTGTTALFLHKHLKPHDVKVITC
SCVGGDEYLEKQFYQLGETDFPEVLTPEKKHHFGKLYRENYEIWKELYQQTQVEFELLYDPLMWRCLTDWLPKNTDQTLM
YIHQGGLLGNESMLPRYKRKFD

Sequences:

>Translated_262_residues
MNSQNIKTIIGYGSPQANSLYSMAALAKLKQWHLHFYVDHIPSYLKENPIGNYRAALELGAKIIPLNKLEHAKDDDGSTT
SSAEYICKIRQPKEDEIYIPEGGRCRLAESGVQKLAEEVLAWKKEANIEHLTVALPSGTGTTALFLHKHLKPHDVKVITC
SCVGGDEYLEKQFYQLGETDFPEVLTPEKKHHFGKLYRENYEIWKELYQQTQVEFELLYDPLMWRCLTDWLPKNTDQTLM
YIHQGGLLGNESMLPRYKRKFD
>Mature_262_residues
MNSQNIKTIIGYGSPQANSLYSMAALAKLKQWHLHFYVDHIPSYLKENPIGNYRAALELGAKIIPLNKLEHAKDDDGSTT
SSAEYICKIRQPKEDEIYIPEGGRCRLAESGVQKLAEEVLAWKKEANIEHLTVALPSGTGTTALFLHKHLKPHDVKVITC
SCVGGDEYLEKQFYQLGETDFPEVLTPEKKHHFGKLYRENYEIWKELYQQTQVEFELLYDPLMWRCLTDWLPKNTDQTLM
YIHQGGLLGNESMLPRYKRKFD

Specific function: Unknown

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30191; Mature: 30191

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQNIKTIIGYGSPQANSLYSMAALAKLKQWHLHFYVDHIPSYLKENPIGNYRAALELG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
AKIIPLNKLEHAKDDDGSTTSSAEYICKIRQPKEDEIYIPEGGRCRLAESGVQKLAEEVL
CEEECCCHHCCCCCCCCCCCCCHHHHEEECCCCCCCEECCCCCCEEHHHHHHHHHHHHHH
AWKKEANIEHLTVALPSGTGTTALFLHKHLKPHDVKVITCSCVGGDEYLEKQFYQLGETD
HHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCC
FPEVLTPEKKHHFGKLYRENYEIWKELYQQTQVEFELLYDPLMWRCLTDWLPKNTDQTLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YIHQGGLLGNESMLPRYKRKFD
EEECCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MNSQNIKTIIGYGSPQANSLYSMAALAKLKQWHLHFYVDHIPSYLKENPIGNYRAALELG
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
AKIIPLNKLEHAKDDDGSTTSSAEYICKIRQPKEDEIYIPEGGRCRLAESGVQKLAEEVL
CEEECCCHHCCCCCCCCCCCCCHHHHEEECCCCCCCEECCCCCCEEHHHHHHHHHHHHHH
AWKKEANIEHLTVALPSGTGTTALFLHKHLKPHDVKVITCSCVGGDEYLEKQFYQLGETD
HHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCC
FPEVLTPEKKHHFGKLYRENYEIWKELYQQTQVEFELLYDPLMWRCLTDWLPKNTDQTLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
YIHQGGLLGNESMLPRYKRKFD
EEECCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA