| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is trpE [H]
Identifier: 59711640
GI number: 59711640
Start: 1136729
End: 1137604
Strand: Reverse
Name: trpE [H]
Synonym: VF_1033
Alternate gene names: 59711640
Gene position: 1137604-1136729 (Counterclockwise)
Preceding gene: 172087686
Following gene: 59711639
Centisome position: 39.26
GC content: 43.84
Gene sequence:
>876_bases ATGCAGTTCCAAGTGTCTCTGATGATGATTTGCCAAACGGTTTTAAATTTAAAAGAATTTGTCATCAAAGGAGATGTGTT CCAAGTTGTTCCTTCTCGTCGTTTTACTCTGCCTTGCCCTGCTCCACTTTCCGCTTACCGCGAACTGAAGATCGGTAACC CAAGTCCTTATATGTTCTATCTGCAAGATCGTGATTTCACACTGTTTGGAGCCTCTCCTGAATCAGCTCTTAAATATTGC AAAGTCAGCAATCAAGTTGAAATTTATCCAATAGCAGGTACTCGTAAACGTGGTAAAAATGCAGATGGTTCCATCAACCA CGATTTAGATAGTCGTATCGAATTGGAATTACGCTGTGACACAAAAGAAAATGCAGAACACATGATGCTGGTTGATTTAG CACGAAACGATGTAGCTCGAATTTCGCAAGCTGGCACTCGTCACGTTGCTGATTTGCTTAAAGTGGATCGCTATAGTCAT GTTATGCATTTAGTGTCACGAGTGGTTGGGCAACTCAGAACCGAACTCGATGCTCTTCACGCTTATCAAGCATGCATGAA CATGGGAACCCTCACTGGTGCTCCTAAAATTCGAGCAATGCAACTTATCCGTGATGTAGAAAAAACTCGCCGTGGTGCTT ATGGTGGCGCTGTGGGTTATTTAACGGGAGATGGCAGCATGGATACCTGTATTGTGATCCGTTCAGCTTATGTCGAAGAT AGTGTTGCTCAAGTTCAAGCTGGTGCCGGCGTAGTATATGACTCAGATCCTCAGGCAGAAGCTGATGAAACACGAGGCAA AGCACAAGCGGTTATCTCAGCCATTCAAAAAGCACACTTATCGGCAACCGCGCAACAAGTTAAGGAGACAAAATAA
Upstream 100 bases:
>100_bases GAAGAAATAAAGCAACAAGTATCAAAACGTTTGTCTTCCATAAAAACATTCTGCTCTGAATCTCATGATGTTCCATTAGC GCCAGTCTTAACTGAATGTG
Downstream 100 bases:
>100_bases TGGCTCACATTGTATTACTCGATAACTTTGATTCCTTTACCTACAACTTAGTTGATCAATTTCGCTCTCTTGGTTACCCA GTGACGATTTACCGTAATAG
Product: component I of anthranilate synthase
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MQFQVSLMMICQTVLNLKEFVIKGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYC KVSNQVEIYPIAGTRKRGKNADGSINHDLDSRIELELRCDTKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSH VMHLVSRVVGQLRTELDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGAYGGAVGYLTGDGSMDTCIVIRSAYVED SVAQVQAGAGVVYDSDPQAEADETRGKAQAVISAIQKAHLSATAQQVKETK
Sequences:
>Translated_291_residues MQFQVSLMMICQTVLNLKEFVIKGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYC KVSNQVEIYPIAGTRKRGKNADGSINHDLDSRIELELRCDTKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSH VMHLVSRVVGQLRTELDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGAYGGAVGYLTGDGSMDTCIVIRSAYVED SVAQVQAGAGVVYDSDPQAEADETRGKAQAVISAIQKAHLSATAQQVKETK >Mature_291_residues MQFQVSLMMICQTVLNLKEFVIKGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYC KVSNQVEIYPIAGTRKRGKNADGSINHDLDSRIELELRCDTKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSH VMHLVSRVVGQLRTELDALHAYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGAYGGAVGYLTGDGSMDTCIVIRSAYVED SVAQVQAGAGVVYDSDPQAEADETRGKAQAVISAIQKAHLSATAQQVKETK
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=263, Percent_Identity=71.4828897338403, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1788114, Length=262, Percent_Identity=33.206106870229, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1786809, Length=215, Percent_Identity=29.7674418604651, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082077, Length=262, Percent_Identity=27.8625954198473, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=267, Percent_Identity=45.6928838951311, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324361, Length=267, Percent_Identity=26.5917602996255, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 32146; Mature: 32146
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFQVSLMMICQTVLNLKEFVIKGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFY CCEEHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECCCCCCHHHHHEEECCCCCCEEEE LQDRDFTLFGASPESALKYCKVSNQVEIYPIAGTRKRGKNADGSINHDLDSRIELELRCD EECCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEC TKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSHVMHLVSRVVGQLRTELDALH CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGAYGGAVGYLTGDGSMDTCIVIRSAYVED HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEHHHHHHH SVAQVQAGAGVVYDSDPQAEADETRGKAQAVISAIQKAHLSATAQQVKETK HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFQVSLMMICQTVLNLKEFVIKGDVFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFY CCEEHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECCCCCCHHHHHEEECCCCCCEEEE LQDRDFTLFGASPESALKYCKVSNQVEIYPIAGTRKRGKNADGSINHDLDSRIELELRCD EECCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEC TKENAEHMMLVDLARNDVARISQAGTRHVADLLKVDRYSHVMHLVSRVVGQLRTELDALH CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYQACMNMGTLTGAPKIRAMQLIRDVEKTRRGAYGGAVGYLTGDGSMDTCIVIRSAYVED HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEHHHHHHH SVAQVQAGAGVVYDSDPQAEADETRGKAQAVISAIQKAHLSATAQQVKETK HHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]