| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is trpE2 [H]
Identifier: 172087686
GI number: 172087686
Start: 1137447
End: 1138370
Strand: Reverse
Name: trpE2 [H]
Synonym: VF_2602
Alternate gene names: 172087686
Gene position: 1138370-1137447 (Counterclockwise)
Preceding gene: 172087687
Following gene: 59711640
Centisome position: 39.29
GC content: 37.77
Gene sequence:
>924_bases ATGCCAATACAATATAATTTAACACAAGATCAACGAATTAGCAGGGAGGCTATAATGCGTTCATCACATTCACAAGATAG TAAACTTGAACTACTTTGCCTTGATGTCCCATACGTTTCAGATCCAACGGAGCTGTATTCCACATTGTGTGCTGACGGCG CAATGAGTTTATTACTTGAATCTGCAGAAGTAGATTCAAAAGAAGACCTAAAAAGTCTAATGCTAATTGACGCTGCTGTT AGAATTCATTGCTTTGGCAAAGACGTAACTTTAGAAGCAATGACAACAAATGGTGAACTATTATTAGCTCAACTTGCTCA ATGCTTACCATCGACATTGATTCAATCAGTTTCAAATAATCTGTTAACACTTCATTTCCCTGATGCTAATCAAGATCTAG ATGAAGACAGCCGTCTTCGAGAACTGTCATCATTTGATGCATTACGCTTTATTCAACATCAATTCGACTTATCAGGCTTA CCTTCAAATGCATTATTCCTTGGCGGTTTATTTGCTTATGACTTAGTAGCCAATTTTGAAAATCTAGGTAATGCTGATTC AACAAATAAGTGCCCGGATTACCTTTTTTATATTGCAGAGACACTGCTGGTTATTGACCATCAAACTCAAAAGTCCACGT TACAAGGTACGCTTTTTTCCCAAAATGAAGAAATAAAGCAACAAGTATCAAAACGTTTGTCTTCCATAAAAACATTCTGC TCTGAATCTCATGATGTTCCATTAGCGCCAGTCTTAACTGAATGTGATGCAGTTCCAAGTGTCTCTGATGATGATTTGCC AAACGGTTTTAAATTTAAAAGAATTTGTCATCAAAGGAGATGTGTTCCAAGTTGTTCCTTCTCGTCGTTTTACTCTGCCT TGCCCTGCTCCACTTTCCGCTTACCGCGAACTGAAGATCGGTAA
Upstream 100 bases:
>100_bases AAAGCACAATTGAGAAATAACGATGAAATAATATACAAACCGCCTTTTAGCCCTCATAAGTTTTAACAAAAGAGTGGCAA CAACTGTGAAATATGCGACT
Downstream 100 bases:
>100_bases CCCAAGTCCTTATATGTTCTATCTGCAAGATCGTGATTTCACACTGTTTGGAGCCTCTCCTGAATCAGCTCTTAAATATT GCAAAGTCAGCAATCAAGTT
Product: component I of anthranilate synthase
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPIQYNLTQDQRISREAIMRSSHSQDSKLELLCLDVPYVSDPTELYSTLCADGAMSLLLESAEVDSKEDLKSLMLIDAAV RIHCFGKDVTLEAMTTNGELLLAQLAQCLPSTLIQSVSNNLLTLHFPDANQDLDEDSRLRELSSFDALRFIQHQFDLSGL PSNALFLGGLFAYDLVANFENLGNADSTNKCPDYLFYIAETLLVIDHQTQKSTLQGTLFSQNEEIKQQVSKRLSSIKTFC SESHDVPLAPVLTECDAVPSVSDDDLPNGFKFKRICHQRRCVPSCSFSSFYSALPCSTFRLPRTEDR
Sequences:
>Translated_307_residues MPIQYNLTQDQRISREAIMRSSHSQDSKLELLCLDVPYVSDPTELYSTLCADGAMSLLLESAEVDSKEDLKSLMLIDAAV RIHCFGKDVTLEAMTTNGELLLAQLAQCLPSTLIQSVSNNLLTLHFPDANQDLDEDSRLRELSSFDALRFIQHQFDLSGL PSNALFLGGLFAYDLVANFENLGNADSTNKCPDYLFYIAETLLVIDHQTQKSTLQGTLFSQNEEIKQQVSKRLSSIKTFC SESHDVPLAPVLTECDAVPSVSDDDLPNGFKFKRICHQRRCVPSCSFSSFYSALPCSTFRLPRTEDR >Mature_306_residues PIQYNLTQDQRISREAIMRSSHSQDSKLELLCLDVPYVSDPTELYSTLCADGAMSLLLESAEVDSKEDLKSLMLIDAAVR IHCFGKDVTLEAMTTNGELLLAQLAQCLPSTLIQSVSNNLLTLHFPDANQDLDEDSRLRELSSFDALRFIQHQFDLSGLP SNALFLGGLFAYDLVANFENLGNADSTNKCPDYLFYIAETLLVIDHQTQKSTLQGTLFSQNEEIKQQVSKRLSSIKTFCS ESHDVPLAPVLTECDAVPSVSDDDLPNGFKFKRICHQRRCVPSCSFSSFYSALPCSTFRLPRTEDR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=231, Percent_Identity=45.4545454545455, Blast_Score=189, Evalue=3e-49,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 34310; Mature: 34179
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQYNLTQDQRISREAIMRSSHSQDSKLELLCLDVPYVSDPTELYSTLCADGAMSLLLE CCEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH SAEVDSKEDLKSLMLIDAAVRIHCFGKDVTLEAMTTNGELLLAQLAQCLPSTLIQSVSNN HHCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC LLTLHFPDANQDLDEDSRLRELSSFDALRFIQHQFDLSGLPSNALFLGGLFAYDLVANFE EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NLGNADSTNKCPDYLFYIAETLLVIDHQTQKSTLQGTLFSQNEEIKQQVSKRLSSIKTFC HCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SESHDVPLAPVLTECDAVPSVSDDDLPNGFKFKRICHQRRCVPSCSFSSFYSALPCSTFR CCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC LPRTEDR CCCCCCC >Mature Secondary Structure PIQYNLTQDQRISREAIMRSSHSQDSKLELLCLDVPYVSDPTELYSTLCADGAMSLLLE CEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH SAEVDSKEDLKSLMLIDAAVRIHCFGKDVTLEAMTTNGELLLAQLAQCLPSTLIQSVSNN HHCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC LLTLHFPDANQDLDEDSRLRELSSFDALRFIQHQFDLSGLPSNALFLGGLFAYDLVANFE EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NLGNADSTNKCPDYLFYIAETLLVIDHQTQKSTLQGTLFSQNEEIKQQVSKRLSSIKTFC HCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SESHDVPLAPVLTECDAVPSVSDDDLPNGFKFKRICHQRRCVPSCSFSSFYSALPCSTFR CCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC LPRTEDR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1773058; 12620739 [H]