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The map label for this gene is dinG [H]

Identifier: 59711616

GI number: 59711616

Start: 1113065

End: 1115149

Strand: Reverse

Name: dinG [H]

Synonym: VF_1009

Alternate gene names: 59711616

Gene position: 1115149-1113065 (Counterclockwise)

Preceding gene: 59711629

Following gene: 59711615

Centisome position: 38.49

GC content: 38.37

Gene sequence:

>2085_bases
ATGCTGAATAAATCGGTTACTGATAGCATTCGCCAAAGCTACAAAACACTACAAGATCAACTTCCAGGTTTTATACCTCG
CCGTGCTCAGAACTATTTAGTAGCAGAAATCGCTAAATCACTTGCAGGTGAATACAGTGATTCTAATCGCATGATTGTTG
CAGAAGCAGGAACAGGCATTGGTAAATCTCTTGCTTATCTACTAAGTGCTATTCCGTATGCGAAGTTAAATAACAAAAAA
GTGGTTATCTCAACTGCAACTGTTGCACTTCAAGAACAGCTTGCTCATAAAGACTTACCTTTCTATCGCCGTATATCGCC
ATTGCCTTTTTCTTTTATTATTGCAAAAGGTCGTCAGCGGTATTGTTGTAGTCATAAGTTGTCTCTACTAACAGAATCAA
ACAATGAAGACGACAAGCAAGTTGCTTTGTTTACTGAAAAACCAAAAAAGAAAGAGTTAGATTTACTAAAGAGAATGTAC
AAAGCATTAGCTGAGGGTAAATGGGACGGTGATATAGATAGCTGGCCAACGACAATTCCCTCTTCTATCTGGCAAAGCAT
TGTTTCAGACAAGTACAGCTGTCATAACGGCTTACCCATGCACCGTGAATGCCCATTTCAAAAAGCACGTGAACACTTAG
ATAAAGCAGATGTGGTTATTGCAAATCACAGTTTAGTTATGGCTGACATCGATTTAGGCGGTGGTGTTGTTTTGTCTGAA
CCAGAACAAACCATATATATTTTTGATGAAGCTCACCATCTGCCAAATGTGGCACGAGAACACTCATCTGCTGCAGCAAG
TTTAAAAGGTTCAGCCTCGTGGTTAGAGTCATTAAACAAATCGGTTAGTAAATTCTGTAATCTTGCAGATCAAAAAAGAG
TTAATCGATTTCAAAACTCTCTTCATGAACATATCCAGGAATTAATTCCTACGCTTAATCAGTTAAGTAAGCAATTTGAC
CCGACATTATTCAATGATGATGGAGTTTATCGTTTTGAACATGGTGAAATACCGAACTGGTTAGCAGAGCAATCCAAAGA
ATTAAAAGAAGTCTCAACTAAAGCCAACCAAGCACTAGCGAAAATTAGTGACTTAATCTCTGAACGCATGAAAGATGGCG
AATTAGCACCGAGAATGGCAGAGCCAGCATTAGCTGAAATAGGCTTTTACTTACAAAGATTAGAAAATTTAGCTCAAGTT
TGGTTTTTAATGGCAAAACCCAATAGTGATAAAGGAGCACCACTCGCTAGATGGCTAGAAAAGAGTCAAGACAGAGACGG
AGATACCTTCATTAACGTATCCCCTCTAGAGGTAGGTTGGCAACTTGACCAAAATTTATGGAGTCGAGCAGCTGGGGCGG
TTGTCGTTTCAGCAACAATGAGAGCATTAAATAGCTATTCATTTTTTTGTAAACAAGCAGGTATATCAGAAAAGCCTGAG
GATGGTGTACGCTTCTTATCCTTGGCTTCACCATTTAATTACCAAGAAAACGCTCAATTGGTGATCCCTAAACTTCCAAT
GGAACCATCAGCCGCAGGGTTTACTGATTTACTAATTGAAGAGCTACCCTTTTATCTTGCAGAGCAATCTTCAAGCTTAG
TTTTATTCTCATCTTACTGGCAAATGAACAAAGTTGCAGAAGGTATAGAAAAGATTGTTAAAAAACATGGATGGAACCTA
CTTATTCAAGGACAGGAATCAAGACAAGAAATTCTAAAAAAACATAAAAAACTTTGTGAGGAGAATAAAATCAGCATCTT
ATTTGGAACAGGAAGTTTTTCTGAAGGATTAGATTTACCTGGAAACCTACTTACAAATCTAATTATAACTAAGATTCCAT
TTGGTGTTCCAACCTCTCCAGTTGAAGAAGCGCATTCGGAATATATTGAGAGCCGAGGTGGTAATCCATTTATGCAGATC
AGTGTTCCAGAAGCGAGCAAAAAATTAATTCAATCTGTAGGTCGACTACTGCGTAAAGAAGAGGATTCTGGTAGAGTTGT
GCTTCTTGATCGCCGTGTAATAACTAAGCGTTATGGTAAAGCTCTTTTGGACGCCTTACCTCCTTTTAAAAGACTAATAG
AGTAA

Upstream 100 bases:

>100_bases
TATTCATCTCAATTTAAAAACATTGAATTCCATTATTTGCAGAAGATCACACTCAAATTTGCGTGGTACAATGGTTTTTT
AAATTTAATTGAGCCTTCTC

Downstream 100 bases:

>100_bases
TATCTCGTTATTACTTAAATCATTCGCAGATGCGAGCTTACTATAGCTATTAATAATTAAGAATTGATATGGAATTTCTC
GAACCATCAACCCTCATTAT

Product: ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 694

Protein sequence:

>694_residues
MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNRMIVAEAGTGIGKSLAYLLSAIPYAKLNNKK
VVISTATVALQEQLAHKDLPFYRRISPLPFSFIIAKGRQRYCCSHKLSLLTESNNEDDKQVALFTEKPKKKELDLLKRMY
KALAEGKWDGDIDSWPTTIPSSIWQSIVSDKYSCHNGLPMHRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSE
PEQTIYIFDEAHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNSLHEHIQELIPTLNQLSKQFD
PTLFNDDGVYRFEHGEIPNWLAEQSKELKEVSTKANQALAKISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQV
WFLMAKPNSDKGAPLARWLEKSQDRDGDTFINVSPLEVGWQLDQNLWSRAAGAVVVSATMRALNSYSFFCKQAGISEKPE
DGVRFLSLASPFNYQENAQLVIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYWQMNKVAEGIEKIVKKHGWNL
LIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLPGNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQI
SVPEASKKLIQSVGRLLRKEEDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE

Sequences:

>Translated_694_residues
MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNRMIVAEAGTGIGKSLAYLLSAIPYAKLNNKK
VVISTATVALQEQLAHKDLPFYRRISPLPFSFIIAKGRQRYCCSHKLSLLTESNNEDDKQVALFTEKPKKKELDLLKRMY
KALAEGKWDGDIDSWPTTIPSSIWQSIVSDKYSCHNGLPMHRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSE
PEQTIYIFDEAHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNSLHEHIQELIPTLNQLSKQFD
PTLFNDDGVYRFEHGEIPNWLAEQSKELKEVSTKANQALAKISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQV
WFLMAKPNSDKGAPLARWLEKSQDRDGDTFINVSPLEVGWQLDQNLWSRAAGAVVVSATMRALNSYSFFCKQAGISEKPE
DGVRFLSLASPFNYQENAQLVIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYWQMNKVAEGIEKIVKKHGWNL
LIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLPGNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQI
SVPEASKKLIQSVGRLLRKEEDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE
>Mature_694_residues
MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNRMIVAEAGTGIGKSLAYLLSAIPYAKLNNKK
VVISTATVALQEQLAHKDLPFYRRISPLPFSFIIAKGRQRYCCSHKLSLLTESNNEDDKQVALFTEKPKKKELDLLKRMY
KALAEGKWDGDIDSWPTTIPSSIWQSIVSDKYSCHNGLPMHRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSE
PEQTIYIFDEAHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNSLHEHIQELIPTLNQLSKQFD
PTLFNDDGVYRFEHGEIPNWLAEQSKELKEVSTKANQALAKISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQV
WFLMAKPNSDKGAPLARWLEKSQDRDGDTFINVSPLEVGWQLDQNLWSRAAGAVVVSATMRALNSYSFFCKQAGISEKPE
DGVRFLSLASPFNYQENAQLVIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYWQMNKVAEGIEKIVKKHGWNL
LIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLPGNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQI
SVPEASKKLIQSVGRLLRKEEDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787018, Length=710, Percent_Identity=34.6478873239437, Blast_Score=352, Evalue=5e-98,
Organism=Escherichia coli, GI1788110, Length=686, Percent_Identity=26.2390670553936, Blast_Score=203, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 77916; Mature: 77916

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNRMIVAEAGTGI
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH
GKSLAYLLSAIPYAKLNNKKVVISTATVALQEQLAHKDLPFYRRISPLPFSFIIAKGRQR
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCCCHH
YCCSHKLSLLTESNNEDDKQVALFTEKPKKKELDLLKRMYKALAEGKWDGDIDSWPTTIP
HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SSIWQSIVSDKYSCHNGLPMHRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSE
HHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCEEEEC
PEQTIYIFDEAHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNS
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LHEHIQELIPTLNQLSKQFDPTLFNDDGVYRFEHGEIPNWLAEQSKELKEVSTKANQALA
HHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
KISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQVWFLMAKPNSDKGAPLARWLE
HHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
KSQDRDGDTFINVSPLEVGWQLDQNLWSRAAGAVVVSATMRALNSYSFFCKQAGISEKPE
HHCCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGVRFLSLASPFNYQENAQLVIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYW
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHH
QMNKVAEGIEKIVKKHGWNLLIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLP
HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
GNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQISVPEASKKLIQSVGRLLRKE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC
EDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE
CCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MLNKSVTDSIRQSYKTLQDQLPGFIPRRAQNYLVAEIAKSLAGEYSDSNRMIVAEAGTGI
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCH
GKSLAYLLSAIPYAKLNNKKVVISTATVALQEQLAHKDLPFYRRISPLPFSFIIAKGRQR
HHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCCCHH
YCCSHKLSLLTESNNEDDKQVALFTEKPKKKELDLLKRMYKALAEGKWDGDIDSWPTTIP
HHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SSIWQSIVSDKYSCHNGLPMHRECPFQKAREHLDKADVVIANHSLVMADIDLGGGVVLSE
HHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCCEEEEC
PEQTIYIFDEAHHLPNVAREHSSAAASLKGSASWLESLNKSVSKFCNLADQKRVNRFQNS
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LHEHIQELIPTLNQLSKQFDPTLFNDDGVYRFEHGEIPNWLAEQSKELKEVSTKANQALA
HHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
KISDLISERMKDGELAPRMAEPALAEIGFYLQRLENLAQVWFLMAKPNSDKGAPLARWLE
HHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHH
KSQDRDGDTFINVSPLEVGWQLDQNLWSRAAGAVVVSATMRALNSYSFFCKQAGISEKPE
HHCCCCCCEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGVRFLSLASPFNYQENAQLVIPKLPMEPSAAGFTDLLIEELPFYLAEQSSSLVLFSSYW
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHH
QMNKVAEGIEKIVKKHGWNLLIQGQESRQEILKKHKKLCEENKISILFGTGSFSEGLDLP
HHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
GNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGNPFMQISVPEASKKLIQSVGRLLRKE
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC
EDSGRVVLLDRRVITKRYGKALLDALPPFKRLIE
CCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396546; 8385320 [H]