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The map label for this gene is yfcA [C]

Identifier: 59711615

GI number: 59711615

Start: 1112226

End: 1112996

Strand: Reverse

Name: yfcA [C]

Synonym: VF_1008

Alternate gene names: 59711615

Gene position: 1112996-1112226 (Counterclockwise)

Preceding gene: 59711616

Following gene: 59711614

Centisome position: 38.41

GC content: 40.6

Gene sequence:

>771_bases
ATGGAATTTCTCGAACCATCAACCCTCATTATCCTAGGGTTAGTTGCCTTTATTGCTGGATTTATTGATGCTGTTGCAGG
CGGAGGAGGAATGTTAACCGTTCCTGCTCTACTCTCAATAGGGCTTCCCCCACACATAGCTTTAGGTACAAATAAGTTAG
CCGCAAGTTTTGCTTCATCTACGGCTGCACTCACCTACTTTAAAAAGAAGTTGTTTGACCCCCATTTTTGGAAAACGTCT
TTTGTCGCAACTTTATTTGGCGCAACATGCGGTACTTTGCTAGTTAACTATATTTCAACGGAATGGCTTGAAAAAGGATT
ACCTTTAATTATTTTAGCTGCTGCAATTTATACTATTTGGCATCCACAACCAAAGGCAGATCAAAATCAATTACCTGGTA
TCACACCTAAACTAAAGACTCAGCAGATTATTCAAGGCTTATCTTTAGGATTTTATGATGGTGTAGCAGGACCTGGAACT
GGTGCGTTTTGGACGGTTAGCAGCATGGCGATGTATCGTCTAAACATCTTATTAGCATCAGGCTTAGCAAAAGCTATGAA
TTTCACCAGTAACTTTACTTCACTGGTTACCTTTGCAATTCTTGGCCATATTAACTGGGCACTAGGTTTAACTATGGGCG
TTTGCTTAATGGTCGGCGCATTTATTGGTGCACACTCAGCTATTCGTTTTGGATCTAAGTTTATTCGACCAGTGTTTGTA
ACTGTGGTTTGTATCTTGGCTGTTAAACTCGCTTTAGACGCTTGGTTCTAA

Upstream 100 bases:

>100_bases
CCTTACCTCCTTTTAAAAGACTAATAGAGTAATATCTCGTTATTACTTAAATCATTCGCAGATGCGAGCTTACTATAGCT
ATTAATAATTAAGAATTGAT

Downstream 100 bases:

>100_bases
CGGAACAATTATGACTAATTTTACCTCTATCGAAATCATGCTAGAACAACTAGGTAAAACGGCGGCTGAAATTGACCGAC
GTCGAGGGGAACAGCGACTC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEFLEPSTLIILGLVAFIAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAASFASSTAALTYFKKKLFDPHFWKTS
FVATLFGATCGTLLVNYISTEWLEKGLPLIILAAAIYTIWHPQPKADQNQLPGITPKLKTQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMAMYRLNILLASGLAKAMNFTSNFTSLVTFAILGHINWALGLTMGVCLMVGAFIGAHSAIRFGSKFIRPVFV
TVVCILAVKLALDAWF

Sequences:

>Translated_256_residues
MEFLEPSTLIILGLVAFIAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAASFASSTAALTYFKKKLFDPHFWKTS
FVATLFGATCGTLLVNYISTEWLEKGLPLIILAAAIYTIWHPQPKADQNQLPGITPKLKTQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMAMYRLNILLASGLAKAMNFTSNFTSLVTFAILGHINWALGLTMGVCLMVGAFIGAHSAIRFGSKFIRPVFV
TVVCILAVKLALDAWF
>Mature_256_residues
MEFLEPSTLIILGLVAFIAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAASFASSTAALTYFKKKLFDPHFWKTS
FVATLFGATCGTLLVNYISTEWLEKGLPLIILAAAIYTIWHPQPKADQNQLPGITPKLKTQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMAMYRLNILLASGLAKAMNFTSNFTSLVTFAILGHINWALGLTMGVCLMVGAFIGAHSAIRFGSKFIRPVFV
TVVCILAVKLALDAWF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=253, Percent_Identity=34.7826086956522, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27275; Mature: 27275

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]