| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711629
Identifier: 59711629
GI number: 59711629
Start: 1128098
End: 1128496
Strand: Reverse
Name: 59711629
Synonym: VF_1022
Alternate gene names: NA
Gene position: 1128496-1128098 (Counterclockwise)
Preceding gene: 59711630
Following gene: 59711616
Centisome position: 38.95
GC content: 37.59
Gene sequence:
>399_bases ATGAAAAAAATTCTACTCACTGCTATTAGTGCAATCATCCTATCTGGCTGTGCATCTAATGAGCAGCAACAAGAGATTGA AATGCTTGCAGACTATCGTGCAAGTGTTCTTGCTAGTGTGCTCCCCCTAGAGATGGGACAACTGACTTTATTACAAGCAA AAGCAAAGCAAGGCGTCGTTGAAATGATGTTCTTGGACGGTGGTAATGGTGAAATCAGTACCAATCAAATCATTGAAAAT AGCATAACTACTTTTTGTAAAGATAAAGAAGTTCGCCCTGTGTTAGATAAAGGGGTAACTTATCGCTACATTATTCGTAA TTCACGTGGTCAAAAACAAAATGATATCATTGTAAATGAACAATCGTGTTTGGATCGCGAACAAGAAAACGAAGAATAA
Upstream 100 bases:
>100_bases AATGACCCTTATATTGATGCTGGTGTTTACGCAAAAGTAATTGTTAAGCCATTTAAAAAAGTGCTTCCAGCTTAATAAAT ATAAACAATAAGATTATCTG
Downstream 100 bases:
>100_bases TACAGCCTCACCAAACAAAAAAGCCCTTTTCATCAACATGATGAGAAGGGCTTTTTGTATCAAACTAATTAGATTAACGA GTAAAACGCATCACTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKKILLTAISAIILSGCASNEQQQEIEMLADYRASVLASVLPLEMGQLTLLQAKAKQGVVEMMFLDGGNGEISTNQIIEN SITTFCKDKEVRPVLDKGVTYRYIIRNSRGQKQNDIIVNEQSCLDREQENEE
Sequences:
>Translated_132_residues MKKILLTAISAIILSGCASNEQQQEIEMLADYRASVLASVLPLEMGQLTLLQAKAKQGVVEMMFLDGGNGEISTNQIIEN SITTFCKDKEVRPVLDKGVTYRYIIRNSRGQKQNDIIVNEQSCLDREQENEE >Mature_132_residues MKKILLTAISAIILSGCASNEQQQEIEMLADYRASVLASVLPLEMGQLTLLQAKAKQGVVEMMFLDGGNGEISTNQIIEN SITTFCKDKEVRPVLDKGVTYRYIIRNSRGQKQNDIIVNEQSCLDREQENEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14766; Mature: 14766
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLTAISAIILSGCASNEQQQEIEMLADYRASVLASVLPLEMGQLTLLQAKAKQGVV CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE EMMFLDGGNGEISTNQIIENSITTFCKDKEVRPVLDKGVTYRYIIRNSRGQKQNDIIVNE EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCEEECC QSCLDREQENEE HHHHCCCCCCCC >Mature Secondary Structure MKKILLTAISAIILSGCASNEQQQEIEMLADYRASVLASVLPLEMGQLTLLQAKAKQGVV CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE EMMFLDGGNGEISTNQIIENSITTFCKDKEVRPVLDKGVTYRYIIRNSRGQKQNDIIVNE EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCCCCEEECC QSCLDREQENEE HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA