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The map label for this gene is ydiY [C]

Identifier: 59711595

GI number: 59711595

Start: 1088147

End: 1088896

Strand: Direct

Name: ydiY [C]

Synonym: VF_0988

Alternate gene names: 59711595

Gene position: 1088147-1088896 (Clockwise)

Preceding gene: 59711594

Following gene: 59711596

Centisome position: 37.55

GC content: 36.27

Gene sequence:

>750_bases
ATGTCACAGTTAACCGCAACTGCATTATTTATCTCATCATTAAGCTTGTTGAGTTTTTCATCTTTAGCAGCAGAACCATC
AGCTGATGATGGGGCGTTTAGTGGAGATGCAAAGATCGGTTTTATCTATACCAAAACAGACGAAACCTCAATGTCGGTTA
ATTCAGGAGCGACTCTAAAGTATGAAGAAGCACTGTGGCACCATAAAGCGGCCTTCTCAACTTACTACACAAAAGGTAAT
GAGAGTGACGATGGTACAAACAAAAATAAAACAGTTTATGATGTAAAATATGACATGACAGATTCATTGTTTGTATTTGG
TAATGCTAAGTATGAACATGACCAATTTGCGACTTATCGTGAACAAGTGTTATTAGTTAGTGGTTTTGGTGCAACGTTAA
TTGATTCATCAAACTCAAAATTAGATGTAGGGGCTGGTCCGGGTTATCGTTATTCTAAACGACAAGCTTTTGATGAAGAT
TTACCAAACAATTCGGAAGATGAAGTCATTGCAAACTTGTTTATTGAAGGGGACAGCAAAATCACTGATGGTTTAGAGCT
TGGTGGCGGTGTTCGTATGGATTATGGTGAATCAAATACAACAACAACGACTCATGTTTATTTAAAAAATAAATTAATGG
AGAGCTTGTCATTGTTGATTGATGCTGAGTATATATACAATAGTGTTGTGGCGACAGGTAAAGAACACGATGAAATATAT
AGCACAATCAGTCTAAATTATGATTTCTAG

Upstream 100 bases:

>100_bases
AGACATAGTCTCGATTTTGAGATCTAACAGTACTTTAGCCGATAAATGGAATTCTCTTGGTTATAATTACAGCACTTTAA
TTATTGTATAGAGGAAATTC

Downstream 100 bases:

>100_bases
ATAATTGTTAATTATATTTAAGCTGAATGGTTATAGGTTTAATTAATTAGTTCGGATACATAATTGGCGTCAATATAACG
GCGCCATTAATTGAGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSQLTATALFISSLSLLSFSSLAAEPSADDGAFSGDAKIGFIYTKTDETSMSVNSGATLKYEEALWHHKAAFSTYYTKGN
ESDDGTNKNKTVYDVKYDMTDSLFVFGNAKYEHDQFATYREQVLLVSGFGATLIDSSNSKLDVGAGPGYRYSKRQAFDED
LPNNSEDEVIANLFIEGDSKITDGLELGGGVRMDYGESNTTTTTHVYLKNKLMESLSLLIDAEYIYNSVVATGKEHDEIY
STISLNYDF

Sequences:

>Translated_249_residues
MSQLTATALFISSLSLLSFSSLAAEPSADDGAFSGDAKIGFIYTKTDETSMSVNSGATLKYEEALWHHKAAFSTYYTKGN
ESDDGTNKNKTVYDVKYDMTDSLFVFGNAKYEHDQFATYREQVLLVSGFGATLIDSSNSKLDVGAGPGYRYSKRQAFDED
LPNNSEDEVIANLFIEGDSKITDGLELGGGVRMDYGESNTTTTTHVYLKNKLMESLSLLIDAEYIYNSVVATGKEHDEIY
STISLNYDF
>Mature_248_residues
SQLTATALFISSLSLLSFSSLAAEPSADDGAFSGDAKIGFIYTKTDETSMSVNSGATLKYEEALWHHKAAFSTYYTKGNE
SDDGTNKNKTVYDVKYDMTDSLFVFGNAKYEHDQFATYREQVLLVSGFGATLIDSSNSKLDVGAGPGYRYSKRQAFDEDL
PNNSEDEVIANLFIEGDSKITDGLELGGGVRMDYGESNTTTTTHVYLKNKLMESLSLLIDAEYIYNSVVATGKEHDEIYS
TISLNYDF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27402; Mature: 27271

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLTATALFISSLSLLSFSSLAAEPSADDGAFSGDAKIGFIYTKTDETSMSVNSGATLK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEE
YEEALWHHKAAFSTYYTKGNESDDGTNKNKTVYDVKYDMTDSLFVFGNAKYEHDQFATYR
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHH
EQVLLVSGFGATLIDSSNSKLDVGAGPGYRYSKRQAFDEDLPNNSEDEVIANLFIEGDSK
HEEEEEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCC
ITDGLELGGGVRMDYGESNTTTTTHVYLKNKLMESLSLLIDAEYIYNSVVATGKEHDEIY
CCCCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
STISLNYDF
EEEEEEECC
>Mature Secondary Structure 
SQLTATALFISSLSLLSFSSLAAEPSADDGAFSGDAKIGFIYTKTDETSMSVNSGATLK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEE
YEEALWHHKAAFSTYYTKGNESDDGTNKNKTVYDVKYDMTDSLFVFGNAKYEHDQFATYR
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHH
EQVLLVSGFGATLIDSSNSKLDVGAGPGYRYSKRQAFDEDLPNNSEDEVIANLFIEGDSK
HEEEEEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCC
ITDGLELGGGVRMDYGESNTTTTTHVYLKNKLMESLSLLIDAEYIYNSVVATGKEHDEIY
CCCCCCCCCCEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
STISLNYDF
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA