| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is qor [H]
Identifier: 59711585
GI number: 59711585
Start: 1073830
End: 1074810
Strand: Reverse
Name: qor [H]
Synonym: VF_0978
Alternate gene names: 59711585
Gene position: 1074810-1073830 (Counterclockwise)
Preceding gene: 59711586
Following gene: 59711573
Centisome position: 37.09
GC content: 36.09
Gene sequence:
>981_bases ATGAGAGCCATCATTCAACAATTTGGACCTGCATTAGAGTCTGTTCAACTCGAACATTACTCCCCTTCAGAACCACTAAT TAATGAACTTCAAGTAGAAATGAAGCTCAGTACGATTAATCCCTCAGATCTAATAACAATTTCAGGAGCCTATCGCTCTC GAATAACATTACCATTTGTACCTGGATTTGAAGGTATAGGAAAGGTAACAAAATGCTCAGATTCAACATCTATATTTTCA ATTGGTGACAGAGTGCTGCCTATTGGCACTGCTGGCGCATGGCAAAAATACCGAAACACAAAAGAGGAGTGGTGCTTTAC CATTCCAGAAAATTTGAGCGATGAGCAAGCAGCAACGTCATATATAAATCCGATGACTGCATGGTTAATGCTAACTGAAG CTCTCAATATTCATTCTGATATGTCTATTATTGTTAATGCTGCCAACTCGGCAATCGGATTAATGCTTATTCGAATGTTA AATCACTTAGGCATTACACCGATTGCTTTAGTTCGCCGAGACAACACTATAGAAGAATTTGAAAACTGCAGAGTTCACAC CATCATCAATACATCAAATAATGCTGATTACCAACAGCTACTCGATATAACAAAAAATAATAAAATCGATGCTGTATTAG ACTTCATTGGTGGAGATGATGCCCTTTTATACACCCACATCATAAAAGAACACGGTCAGTTTATTAATTATGGTTTATTG TCTAAGCAACCAATTCCTGCTGATTTCTGGATTCAACGCCCTGATATTCAATTTTCATATTTTCATCTTAGGCAGTGGAT ACATTCAGCTGAAAAGCCGCTGATTCAACACAAATTGAATGAAGTAATGAATCTTGTTCATCAAGGAATTGCAGATACAA CAATTGATCGTTATTTCTCTTTAAAAGAAATTCATCATGCGATTCAATATATTGAAAAAACCAGAACGGTTAATAAAGGA AAGGTTCTTATCACTTTTTAA
Upstream 100 bases:
>100_bases TAAGTATGTTGTGCTTTTTTAATAGATATCACTGGTAAGCTTGGTATTACACGCTCATTATGCTACACATAAAACATTAT TTACCAATATCTTAAATTCA
Downstream 100 bases:
>100_bases TAAGAACCTTTAAACAATTGACTACTTAATCATTTTTTCCATTGATAGGTGTGGAATATCGGCTTCAATAAACTCTTCGC CATAAGGTCGGAAACCTAGT
Product: quinone oxidoreductase, NADPH-dependent
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRAIIQQFGPALESVQLEHYSPSEPLINELQVEMKLSTINPSDLITISGAYRSRITLPFVPGFEGIGKVTKCSDSTSIFS IGDRVLPIGTAGAWQKYRNTKEEWCFTIPENLSDEQAATSYINPMTAWLMLTEALNIHSDMSIIVNAANSAIGLMLIRML NHLGITPIALVRRDNTIEEFENCRVHTIINTSNNADYQQLLDITKNNKIDAVLDFIGGDDALLYTHIIKEHGQFINYGLL SKQPIPADFWIQRPDIQFSYFHLRQWIHSAEKPLIQHKLNEVMNLVHQGIADTTIDRYFSLKEIHHAIQYIEKTRTVNKG KVLITF
Sequences:
>Translated_326_residues MRAIIQQFGPALESVQLEHYSPSEPLINELQVEMKLSTINPSDLITISGAYRSRITLPFVPGFEGIGKVTKCSDSTSIFS IGDRVLPIGTAGAWQKYRNTKEEWCFTIPENLSDEQAATSYINPMTAWLMLTEALNIHSDMSIIVNAANSAIGLMLIRML NHLGITPIALVRRDNTIEEFENCRVHTIINTSNNADYQQLLDITKNNKIDAVLDFIGGDDALLYTHIIKEHGQFINYGLL SKQPIPADFWIQRPDIQFSYFHLRQWIHSAEKPLIQHKLNEVMNLVHQGIADTTIDRYFSLKEIHHAIQYIEKTRTVNKG KVLITF >Mature_326_residues MRAIIQQFGPALESVQLEHYSPSEPLINELQVEMKLSTINPSDLITISGAYRSRITLPFVPGFEGIGKVTKCSDSTSIFS IGDRVLPIGTAGAWQKYRNTKEEWCFTIPENLSDEQAATSYINPMTAWLMLTEALNIHSDMSIIVNAANSAIGLMLIRML NHLGITPIALVRRDNTIEEFENCRVHTIINTSNNADYQQLLDITKNNKIDAVLDFIGGDDALLYTHIIKEHGQFINYGLL SKQPIPADFWIQRPDIQFSYFHLRQWIHSAEKPLIQHKLNEVMNLVHQGIADTTIDRYFSLKEIHHAIQYIEKTRTVNKG KVLITF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308257, Length=339, Percent_Identity=25.0737463126844, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI67078404, Length=289, Percent_Identity=24.5674740484429, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI18379349, Length=316, Percent_Identity=24.0506329113924, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI67078406, Length=283, Percent_Identity=24.7349823321555, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1790485, Length=331, Percent_Identity=25.9818731117825, Blast_Score=93, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536829, Length=315, Percent_Identity=28.2539682539683, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17556000, Length=252, Percent_Identity=32.5396825396825, Blast_Score=111, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6319520, Length=268, Percent_Identity=24.6268656716418, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319500, Length=298, Percent_Identity=21.4765100671141, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI45550423, Length=289, Percent_Identity=26.643598615917, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 37036; Mature: 37036
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIIQQFGPALESVQLEHYSPSEPLINELQVEMKLSTINPSDLITISGAYRSRITLPFV CCHHHHHHCCHHHHEEECCCCCCCHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEECC PGFEGIGKVTKCSDSTSIFSIGDRVLPIGTAGAWQKYRNTKEEWCFTIPENLSDEQAATS CCCCCCCCCEECCCCCCEEECCCEEEECCCCHHHHHHCCCCHHEEEECCCCCCHHHHHHH YINPMTAWLMLTEALNIHSDMSIIVNAANSAIGLMLIRMLNHLGITPIALVRRDNTIEEF HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH ENCRVHTIINTSNNADYQQLLDITKNNKIDAVLDFIGGDDALLYTHIIKEHGQFINYGLL HCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCC SKQPIPADFWIQRPDIQFSYFHLRQWIHSAEKPLIQHKLNEVMNLVHQGIADTTIDRYFS CCCCCCHHHEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH LKEIHHAIQYIEKTRTVNKGKVLITF HHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MRAIIQQFGPALESVQLEHYSPSEPLINELQVEMKLSTINPSDLITISGAYRSRITLPFV CCHHHHHHCCHHHHEEECCCCCCCHHHHHHEEEEEEEECCCCCEEEEECCCCCEEEEECC PGFEGIGKVTKCSDSTSIFSIGDRVLPIGTAGAWQKYRNTKEEWCFTIPENLSDEQAATS CCCCCCCCCEECCCCCCEEECCCEEEECCCCHHHHHHCCCCHHEEEECCCCCCHHHHHHH YINPMTAWLMLTEALNIHSDMSIIVNAANSAIGLMLIRMLNHLGITPIALVRRDNTIEEF HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH ENCRVHTIINTSNNADYQQLLDITKNNKIDAVLDFIGGDDALLYTHIIKEHGQFINYGLL HCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCC SKQPIPADFWIQRPDIQFSYFHLRQWIHSAEKPLIQHKLNEVMNLVHQGIADTTIDRYFS CCCCCCHHHEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH LKEIHHAIQYIEKTRTVNKGKVLITF HHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]