| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711573
Identifier: 59711573
GI number: 59711573
Start: 1058902
End: 1059492
Strand: Reverse
Name: 59711573
Synonym: VF_0966
Alternate gene names: NA
Gene position: 1059492-1058902 (Counterclockwise)
Preceding gene: 59711585
Following gene: 59711555
Centisome position: 36.57
GC content: 39.26
Gene sequence:
>591_bases ATGTCTTTATCACTTACGACAATTCTTTCAAACCCTGAATTAGAAAATAAACTGCTTACTGAAGCGCAAACTCAAGGTTT TATTGCCGCTATGGCAGCAGCCCCTAATCTGATTAATCCAAATGAATGGTTAGCTTTTTTATGGGGTGGTGAAGAAACTT CTCCATTTACTAATGCAGAAGATCTAGAAGCTTATGCGAACATCGTTGTTAACTTATGGAATGATTATCGTGAAGCGTTT TTATCTGGCACATGGCAATGGCCTGAAGAGTGTAAATTAGATGATGAAGAAATCGTTACTTCTGAAACTCGTCAATTTTC AGAAGGTCTATTACAAGGCTGGCAACTAACTCGTGATGATTGGGAAACCTTAATGCCAGAAGAAAGTGAAAACAACGCCT TACTTGGTGGTGTATTACTTTCTATTAGCATGCTTTTTGACCCAGAGACGGCGCTATCTGCATTAGAAGAACAAGGTATC GAAGGTTTAGGCGAATTCACTGAAATTTACAATGCTGTACCTATGATGCTATCAGGATTAACCATGCGTGGTTATGAACT TGCAGAAGCAGAAGCAAGTCGCGACGAATAA
Upstream 100 bases:
>100_bases AGGTAATAAAATTACATACAAAATTGCTACATAATTTCATTTCAGACAAGGCAAAAACTTCTTGGTACAATAGTAAAAAA TTGAATGGAATGAGAACACT
Downstream 100 bases:
>100_bases ATAAAGTCCAAAAATAAAATTACAAAAATGGCGACCGCACTGGTCGCCATTTTTATATAAAACATTTATCGCATTATCTA TTTGCGTTTAATTGCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSLSLTTILSNPELENKLLTEAQTQGFIAAMAAAPNLINPNEWLAFLWGGEETSPFTNAEDLEAYANIVVNLWNDYREAF LSGTWQWPEECKLDDEEIVTSETRQFSEGLLQGWQLTRDDWETLMPEESENNALLGGVLLSISMLFDPETALSALEEQGI EGLGEFTEIYNAVPMMLSGLTMRGYELAEAEASRDE
Sequences:
>Translated_196_residues MSLSLTTILSNPELENKLLTEAQTQGFIAAMAAAPNLINPNEWLAFLWGGEETSPFTNAEDLEAYANIVVNLWNDYREAF LSGTWQWPEECKLDDEEIVTSETRQFSEGLLQGWQLTRDDWETLMPEESENNALLGGVLLSISMLFDPETALSALEEQGI EGLGEFTEIYNAVPMMLSGLTMRGYELAEAEASRDE >Mature_195_residues SLSLTTILSNPELENKLLTEAQTQGFIAAMAAAPNLINPNEWLAFLWGGEETSPFTNAEDLEAYANIVVNLWNDYREAFL SGTWQWPEECKLDDEEIVTSETRQFSEGLLQGWQLTRDDWETLMPEESENNALLGGVLLSISMLFDPETALSALEEQGIE GLGEFTEIYNAVPMMLSGLTMRGYELAEAEASRDE
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21778
Theoretical pI: Translated: 3.46; Mature: 3.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLTTILSNPELENKLLTEAQTQGFIAAMAAAPNLINPNEWLAFLWGGEETSPFTNAE CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH DLEAYANIVVNLWNDYREAFLSGTWQWPEECKLDDEEIVTSETRQFSEGLLQGWQLTRDD HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH WETLMPEESENNALLGGVLLSISMLFDPETALSALEEQGIEGLGEFTEIYNAVPMMLSGL HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC TMRGYELAEAEASRDE CCCCCHHHHHHCCCCC >Mature Secondary Structure SLSLTTILSNPELENKLLTEAQTQGFIAAMAAAPNLINPNEWLAFLWGGEETSPFTNAE CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHH DLEAYANIVVNLWNDYREAFLSGTWQWPEECKLDDEEIVTSETRQFSEGLLQGWQLTRDD HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH WETLMPEESENNALLGGVLLSISMLFDPETALSALEEQGIEGLGEFTEIYNAVPMMLSGL HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC TMRGYELAEAEASRDE CCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA