| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711586
Identifier: 59711586
GI number: 59711586
Start: 1074942
End: 1075259
Strand: Reverse
Name: 59711586
Synonym: VF_0979
Alternate gene names: NA
Gene position: 1075259-1074942 (Counterclockwise)
Preceding gene: 59711587
Following gene: 59711585
Centisome position: 37.11
GC content: 37.42
Gene sequence:
>318_bases ATGGAAGACGCACAATACGTTGTTGAGTGGGAAGAAAACACCACATTAAATTTTGAAGGTGCTCAATTAGTTTCTGCTTA CCATACTTGTGAAGAAGAAGGTGATGAAACTGAACTTGAATTCGGTGAAGGCTGGTTTCAAGGTAAAGATGGTGAAGAGT ACCGTATTGAAGTTCAAATGGCTCCTTTCCATCCTTATGATGAAGATCCTGTTCGTTTAGCTAACATCACAATTAATGGT GAAATCGTTAAAATTCTGGAAATTGCAGAAACCATTGATGGTGAATTCTTCATTGAACCAAGTGATAGCGATTACTAA
Upstream 100 bases:
>100_bases TATTCGTCAACACCGTCCGATGGTTGCCGGCGAATAATTCCTTAGATTCTTATTACAGTGCGCGCTACAATGCGCACTTA AATAATTATGAGATATTAAA
Downstream 100 bases:
>100_bases AGCACAATCTTGAATACTAAAAAGCACAGCATAAGTATGTTGTGCTTTTTTAATAGATATCACTGGTAAGCTTGGTATTA CACGCTCATTATGCTACACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MEDAQYVVEWEENTTLNFEGAQLVSAYHTCEEEGDETELEFGEGWFQGKDGEEYRIEVQMAPFHPYDEDPVRLANITING EIVKILEIAETIDGEFFIEPSDSDY
Sequences:
>Translated_105_residues MEDAQYVVEWEENTTLNFEGAQLVSAYHTCEEEGDETELEFGEGWFQGKDGEEYRIEVQMAPFHPYDEDPVRLANITING EIVKILEIAETIDGEFFIEPSDSDY >Mature_105_residues MEDAQYVVEWEENTTLNFEGAQLVSAYHTCEEEGDETELEFGEGWFQGKDGEEYRIEVQMAPFHPYDEDPVRLANITING EIVKILEIAETIDGEFFIEPSDSDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12104; Mature: 12104
Theoretical pI: Translated: 3.50; Mature: 3.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDAQYVVEWEENTTLNFEGAQLVSAYHTCEEEGDETELEFGEGWFQGKDGEEYRIEVQM CCCCEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCEEEEEEEE APFHPYDEDPVRLANITINGEIVKILEIAETIDGEFFIEPSDSDY CCCCCCCCCCEEEEEEEECCCEEEEEEHHHHCCCEEEECCCCCCC >Mature Secondary Structure MEDAQYVVEWEENTTLNFEGAQLVSAYHTCEEEGDETELEFGEGWFQGKDGEEYRIEVQM CCCCEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCEEEEEEEE APFHPYDEDPVRLANITINGEIVKILEIAETIDGEFFIEPSDSDY CCCCCCCCCCEEEEEEEECCCEEEEEEHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA