| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is chbA [H]
Identifier: 59711214
GI number: 59711214
Start: 666581
End: 666904
Strand: Direct
Name: chbA [H]
Synonym: VF_0607
Alternate gene names: 59711214
Gene position: 666581-666904 (Clockwise)
Preceding gene: 59711213
Following gene: 59711215
Centisome position: 23.01
GC content: 39.2
Gene sequence:
>324_bases ATGCTAGTCGGTGAAGAGTTAGAAACTACAGTAATGGAACTTATTATTAATGCAGGTGAATCTAAATCATGTGCAATGGA AGCGTTACGAGCAGCAAAATCTGGCGAATGGGATAAAGTTGATGATCTTTTAAAGCAATCAGCTGAAGCTTCGAAAAGAG CGCATGATGTGCAAACACAGCTTATTGGCATGGATGAGGGAGAAGGAAAAGTGCCTGTAAATTTAATTATGGTGCACGCC CAAGATCATATTATGACCTCTATGCTTGCAAAAGAGATGATTCAAGAGCTAATTGAGATTCATCGCGCGTTGCAGAATAA ATAA
Upstream 100 bases:
>100_bases TTTCCATTGAGAAAAGTACATTTAATAATGACAGTGGATTAATTGGAGCGGTATATCACTTTTTAACAATGAAAAACAAA TTTAAATAGGAATAAAGAAT
Downstream 100 bases:
>100_bases TAAAGTGTATTTAGCGTAATAACTTAGCTATTATTACGCTAATTTCATCTACATATTTTTGAGGGCTCAATGGCAACAAT CAATGACGTATGTAAGCTTG
Product: PTS system, cellobiose-utilization IIA component
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Chb; EIII-Chb; PTS system N,N'-diacetylchitobiose-specific EIIA component [H]
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLVGEELETTVMELIINAGESKSCAMEALRAAKSGEWDKVDDLLKQSAEASKRAHDVQTQLIGMDEGEGKVPVNLIMVHA QDHIMTSMLAKEMIQELIEIHRALQNK
Sequences:
>Translated_107_residues MLVGEELETTVMELIINAGESKSCAMEALRAAKSGEWDKVDDLLKQSAEASKRAHDVQTQLIGMDEGEGKVPVNLIMVHA QDHIMTSMLAKEMIQELIEIHRALQNK >Mature_107_residues MLVGEELETTVMELIINAGESKSCAMEALRAAKSGEWDKVDDLLKQSAEASKRAHDVQTQLIGMDEGEGKVPVNLIMVHA QDHIMTSMLAKEMIQELIEIHRALQNK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG1447
COG function: function code G; Phosphotransferase system cellobiose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788031, Length=102, Percent_Identity=53.921568627451, Blast_Score=106, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003188 [H]
Pfam domain/function: PF02255 PTS_IIA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 11872; Mature: 11872
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGEELETTVMELIINAGESKSCAMEALRAAKSGEWDKVDDLLKQSAEASKRAHDVQTQ CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LIGMDEGEGKVPVNLIMVHAQDHIMTSMLAKEMIQELIEIHRALQNK HHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLVGEELETTVMELIINAGESKSCAMEALRAAKSGEWDKVDDLLKQSAEASKRAHDVQTQ CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LIGMDEGEGKVPVNLIMVHAQDHIMTSMLAKEMIQELIEIHRALQNK HHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]