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The map label for this gene is 59710947

Identifier: 59710947

GI number: 59710947

Start: 366473

End: 368233

Strand: Reverse

Name: 59710947

Synonym: VF_0340

Alternate gene names: NA

Gene position: 368233-366473 (Counterclockwise)

Preceding gene: 59710948

Following gene: 59710945

Centisome position: 12.71

GC content: 35.83

Gene sequence:

>1761_bases
ATGGCTACGCTCTTAACTCAAGGCACCCTATTAGAAGCAAAAAAAATCAAAAAGCCTCTAACCAAATCTTTTTTACTCAG
CCTTACCATTCTTTTCTTTTTTTGTGCCCACTTTTTTCAGCCAAATCCTGGCGGTTCTGGCCTTCACCTTGCATTTAATG
CCGCTTCTTGGATCCCTGCAAGTATCGCTATTGCTATTGCTCTTTTTCATATAGCAAAGCAAGGCATACTTAAATTTTCG
ACATTAAGCATCGTACTATTCATCTCGGTATGTTTATTATCAATTCCGTTACTTTATCAAGAGGCATCCCCACATCTTGC
TACCGGAAAGTTTTTAGGCCTATGGGCTGGATTACTCTTTTTTATTACTCTACAACAATTTTCATTTTCAAATAAGCAGA
AGCAATGGCTGTTATGGTGCATCATTGGTTCAGTTCTTATTGAAACTCTATTTGGCTATATTCAATATCTGTTTTTAGAA
ACCGGGAATTCATTTGGTTATAACGTAATAGTAAATCGCCCTTATGGTATTTTCCAACAACCCAATGTTATGGCAAGCTT
TCTCGTAACCGGTTTGGCCATTGCCTCTTATTTCCTTGCAAGACAACCGATAAAGTATCGAGAAAATATCATTGCATTAA
CCTTACTCTACGCAACAATCATATTCACTCTACCTTTAATTGTTGTTTTAGCTTCTCGTACTGGTTGGTTATCTGCGACT
TTTAGTTTAGTTCTGCTTGTTCCTTATATGTGGAAATACTGTACTAAACCACGTTTTATTTCTTGGTTGCTAGCGCTAGT
AGTTGGTTTTAGTGGGAGCTTTGCTCTACTCGATTTATCCAAAAATGATGATATATCAAACGTAACACTTATTAGTAAAA
AAGCCGATTTAGAGAGCGCAAGAGAATATATTTTTCCTCAAGCTCTGGATATGTTTTTAGAAAAACCCGTCACAGGTTAT
GGTTATGGTAATTTCGAAGCTGAATACATTCTTTATACAGCGAAACAGCATCAATTATCTTCTGACTATAGAGCAGGTGA
ACCGTCAATGGATCACCCTCATAACGAAATTCTATACTGGGGAGTTGAAGGTGGTATTGTCGCTATTTTAGGTTTATTAC
TTGCCGCTGGCGGTGTCTTAGCCAAAATACGACGAAGCAAACTGGATACTCAATTTGCTCTACTTGCTTTAATTGCCCCC
ATTTTTATTCATAGTCAGTTAGAGTACCCTTTTTATCATTCAATGATTCATTGGTTTACTTTTATTATTCTCTTATTTTG
GATTGACCAATTAAGCTGTAAATACAAAAAATATCGAATCAGTGATATCAGTAAAATCACCCTACGTGTCAGTTCATTAG
TGCTACCTATTGTGACTGGTTTTTATATGCTATCAACACTACATACAAACTGGGTATTAACTCAATTTGAAACCACAAAA
CCAATGAATCCAGACATTTTAAGTCGAGTAACCAACCCTGTTGTGTGGGAGGATAGATTCAATTGGGACGTACTTTCGAC
ACAATTAAAAATCGGTATTATTAATAAGAAACCAGAACTAATTAAACCCTATATTGAGTGGTCACAAGAATTAATAAAAA
CCAAACCAAGACCTGCTTTTTATCAAAACTTAATCATTGCTTATCAAGCGTTGGGAGATGAAAAAAGAGCGGAAGATATA
AGAAGAGAAGCCATATTCCTCTTTCCAAAAAGTAAATTTGAATCCGTACAACTCGATAAGAAATTACAGATGACTAACTA
A

Upstream 100 bases:

>100_bases
ATAACGTAACTCAGCAGAAAGTCCGCACTTTCATCTATGGATAAGATAGAATAAGGCCAACATTTTTGTTGGCTTTATTA
TATAAGGAAATAGTTGGAAA

Downstream 100 bases:

>100_bases
AAACTATTAGCATAAACAGCCACGGGATTTAGTGGCTGTTTTATTTAATATTTACTTTAAAACATCAGATAATGCTTTTA
AGCACAATGCGACATTCTCT

Product: putative Lipid A core -- O-antigen ligase Wzy-like protein

Products: NA

Alternate protein names: Lipid A Core; O-Antigen Polymerase Family; Inner Membrane Protein

Number of amino acids: Translated: 586; Mature: 585

Protein sequence:

>586_residues
MATLLTQGTLLEAKKIKKPLTKSFLLSLTILFFFCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIALFHIAKQGILKFS
TLSIVLFISVCLLSIPLLYQEASPHLATGKFLGLWAGLLFFITLQQFSFSNKQKQWLLWCIIGSVLIETLFGYIQYLFLE
TGNSFGYNVIVNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENIIALTLLYATIIFTLPLIVVLASRTGWLSAT
FSLVLLVPYMWKYCTKPRFISWLLALVVGFSGSFALLDLSKNDDISNVTLISKKADLESAREYIFPQALDMFLEKPVTGY
GYGNFEAEYILYTAKQHQLSSDYRAGEPSMDHPHNEILYWGVEGGIVAILGLLLAAGGVLAKIRRSKLDTQFALLALIAP
IFIHSQLEYPFYHSMIHWFTFIILLFWIDQLSCKYKKYRISDISKITLRVSSLVLPIVTGFYMLSTLHTNWVLTQFETTK
PMNPDILSRVTNPVVWEDRFNWDVLSTQLKIGIINKKPELIKPYIEWSQELIKTKPRPAFYQNLIIAYQALGDEKRAEDI
RREAIFLFPKSKFESVQLDKKLQMTN

Sequences:

>Translated_586_residues
MATLLTQGTLLEAKKIKKPLTKSFLLSLTILFFFCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIALFHIAKQGILKFS
TLSIVLFISVCLLSIPLLYQEASPHLATGKFLGLWAGLLFFITLQQFSFSNKQKQWLLWCIIGSVLIETLFGYIQYLFLE
TGNSFGYNVIVNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENIIALTLLYATIIFTLPLIVVLASRTGWLSAT
FSLVLLVPYMWKYCTKPRFISWLLALVVGFSGSFALLDLSKNDDISNVTLISKKADLESAREYIFPQALDMFLEKPVTGY
GYGNFEAEYILYTAKQHQLSSDYRAGEPSMDHPHNEILYWGVEGGIVAILGLLLAAGGVLAKIRRSKLDTQFALLALIAP
IFIHSQLEYPFYHSMIHWFTFIILLFWIDQLSCKYKKYRISDISKITLRVSSLVLPIVTGFYMLSTLHTNWVLTQFETTK
PMNPDILSRVTNPVVWEDRFNWDVLSTQLKIGIINKKPELIKPYIEWSQELIKTKPRPAFYQNLIIAYQALGDEKRAEDI
RREAIFLFPKSKFESVQLDKKLQMTN
>Mature_585_residues
ATLLTQGTLLEAKKIKKPLTKSFLLSLTILFFFCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIALFHIAKQGILKFST
LSIVLFISVCLLSIPLLYQEASPHLATGKFLGLWAGLLFFITLQQFSFSNKQKQWLLWCIIGSVLIETLFGYIQYLFLET
GNSFGYNVIVNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENIIALTLLYATIIFTLPLIVVLASRTGWLSATF
SLVLLVPYMWKYCTKPRFISWLLALVVGFSGSFALLDLSKNDDISNVTLISKKADLESAREYIFPQALDMFLEKPVTGYG
YGNFEAEYILYTAKQHQLSSDYRAGEPSMDHPHNEILYWGVEGGIVAILGLLLAAGGVLAKIRRSKLDTQFALLALIAPI
FIHSQLEYPFYHSMIHWFTFIILLFWIDQLSCKYKKYRISDISKITLRVSSLVLPIVTGFYMLSTLHTNWVLTQFETTKP
MNPDILSRVTNPVVWEDRFNWDVLSTQLKIGIINKKPELIKPYIEWSQELIKTKPRPAFYQNLIIAYQALGDEKRAEDIR
REAIFLFPKSKFESVQLDKKLQMTN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66688; Mature: 66557

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLLTQGTLLEAKKIKKPLTKSFLLSLTILFFFCAHFFQPNPGGSGLHLAFNAASWIPA
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH
SIAIAIALFHIAKQGILKFSTLSIVLFISVCLLSIPLLYQEASPHLATGKFLGLWAGLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FITLQQFSFSNKQKQWLLWCIIGSVLIETLFGYIQYLFLETGNSFGYNVIVNRPYGIFQQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PNVMASFLVTGLAIASYFLARQPIKYRENIIALTLLYATIIFTLPLIVVLASRTGWLSAT
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSLVLLVPYMWKYCTKPRFISWLLALVVGFSGSFALLDLSKNDDISNVTLISKKADLESA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHH
REYIFPQALDMFLEKPVTGYGYGNFEAEYILYTAKQHQLSSDYRAGEPSMDHPHNEILYW
HHHHCHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCEEEE
GVEGGIVAILGLLLAAGGVLAKIRRSKLDTQFALLALIAPIFIHSQLEYPFYHSMIHWFT
ECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FIILLFWIDQLSCKYKKYRISDISKITLRVSSLVLPIVTGFYMLSTLHTNWVLTQFETTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
PMNPDILSRVTNPVVWEDRFNWDVLSTQLKIGIINKKPELIKPYIEWSQELIKTKPRPAF
CCCHHHHHHCCCCEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH
YQNLIIAYQALGDEKRAEDIRREAIFLFPKSKFESVQLDKKLQMTN
HHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
ATLLTQGTLLEAKKIKKPLTKSFLLSLTILFFFCAHFFQPNPGGSGLHLAFNAASWIPA
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH
SIAIAIALFHIAKQGILKFSTLSIVLFISVCLLSIPLLYQEASPHLATGKFLGLWAGLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FITLQQFSFSNKQKQWLLWCIIGSVLIETLFGYIQYLFLETGNSFGYNVIVNRPYGIFQQ
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PNVMASFLVTGLAIASYFLARQPIKYRENIIALTLLYATIIFTLPLIVVLASRTGWLSAT
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSLVLLVPYMWKYCTKPRFISWLLALVVGFSGSFALLDLSKNDDISNVTLISKKADLESA
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCHHHH
REYIFPQALDMFLEKPVTGYGYGNFEAEYILYTAKQHQLSSDYRAGEPSMDHPHNEILYW
HHHHCHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCCCCCCCCCCCCCCCCEEEE
GVEGGIVAILGLLLAAGGVLAKIRRSKLDTQFALLALIAPIFIHSQLEYPFYHSMIHWFT
ECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FIILLFWIDQLSCKYKKYRISDISKITLRVSSLVLPIVTGFYMLSTLHTNWVLTQFETTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
PMNPDILSRVTNPVVWEDRFNWDVLSTQLKIGIINKKPELIKPYIEWSQELIKTKPRPAF
CCCHHHHHHCCCCEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH
YQNLIIAYQALGDEKRAEDIRREAIFLFPKSKFESVQLDKKLQMTN
HHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA