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The map label for this gene is argR

Identifier: 59710882

GI number: 59710882

Start: 282360

End: 282830

Strand: Reverse

Name: argR

Synonym: VF_0275

Alternate gene names: 59710882

Gene position: 282830-282360 (Counterclockwise)

Preceding gene: 59710884

Following gene: 59710881

Centisome position: 9.76

GC content: 40.13

Gene sequence:

>471_bases
ATGCGAAATAATGAAAAACAAGAACTACTAGTTAAAGAGTTTAAAGCCATTCTTAAAGCTGAACGATTTGGCTCCCAAGG
TGAAATCGTTGATGCTCTTCGTCAATCTGGCTTTGATAACATCAACCAATCTAAAGTTTCACGAATGCTGACTAAGTTTG
GTGCCGTTCGTACACGCAATGCAAAAATGGAAATGGTGTACTGCCTACCCGTTGAACTTGGTGTTCCTACTGTTTCAAGC
TCATTACGTGAACTCGTTATGGATATTGATTACAACAACGCATTAGTTGTTATTCATACCGGTCCTGGAGCTGCGCAACT
AATTGCCCGCCTACTAGATTCTTTAGGTAAAGCAGAAGGCATCCTAGGTGTTGTCGCGGGTGACGATACTATCTTTATTA
CACCAACTCGTAATATTGAAGTTGCTGAACTGTTTGATTCAGTTTGCGACTTGTTTGAATACTCAGTTTAA

Upstream 100 bases:

>100_bases
AATCACTGGTAATTATTCACAAATTTACCATTTTGACTTGGTTATAAATAAATAATTATGCGAGAATAGTAAGAATTGTT
GCAAAAAGAATCAAAACAGT

Downstream 100 bases:

>100_bases
TCACATAAATTTAAGCACTTTATGCTTCTCATAAAGTGCTTCCTCCTATTTATAACTCTCCTCATTAACCACACTAAAAG
TGTCAGAAACCACCTAAATT

Product: arginine repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPVELGVPTVSS
SLRELVMDIDYNNALVVIHTGPGAAQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEVAELFDSVCDLFEYSV

Sequences:

>Translated_156_residues
MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPVELGVPTVSS
SLRELVMDIDYNNALVVIHTGPGAAQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEVAELFDSVCDLFEYSV
>Mature_156_residues
MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPVELGVPTVSS
SLRELVMDIDYNNALVVIHTGPGAAQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEVAELFDSVCDLFEYSV

Specific function: Regulates arginine biosynthesis genes

COG id: COG1438

COG function: function code K; Arginine repressor

Gene ontology:

Cell location: Cytoplasm (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArgR family

Homologues:

Organism=Escherichia coli, GI1789633, Length=153, Percent_Identity=74.5098039215686, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARGR_VIBF1 (Q5E876)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_203658.1
- HSSP:   P0A6D0
- ProteinModelPortal:   Q5E876
- STRING:   Q5E876
- GeneID:   3277927
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0275
- NMPDR:   fig|312309.3.peg.275
- eggNOG:   COG1438
- HOGENOM:   HBG697909
- OMA:   ITPTRNI
- PhylomeDB:   Q5E876
- ProtClustDB:   PRK05066
- BioCyc:   VFIS312309:VF0275-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00173
- InterPro:   IPR001669
- InterPro:   IPR020899
- InterPro:   IPR020900
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.30.1360.40
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR01467
- ProDom:   PD007402
- TIGRFAMs:   TIGR01529

Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress

EC number: NA

Molecular weight: Translated: 17196; Mature: 17196

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRMLTKFGAVRTRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
AKMEMVYCLPVELGVPTVSSSLRELVMDIDYNNALVVIHTGPGAAQLIARLLDSLGKAEG
CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
ILGVVAGDDTIFITPTRNIEVAELFDSVCDLFEYSV
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNNEKQELLVKEFKAILKAERFGSQGEIVDALRQSGFDNINQSKVSRMLTKFGAVRTRN
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
AKMEMVYCLPVELGVPTVSSSLRELVMDIDYNNALVVIHTGPGAAQLIARLLDSLGKAEG
CCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCC
ILGVVAGDDTIFITPTRNIEVAELFDSVCDLFEYSV
EEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA