| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is bcsP31 [H]
Identifier: 59710881
GI number: 59710881
Start: 281055
End: 282029
Strand: Reverse
Name: bcsP31 [H]
Synonym: VF_0274
Alternate gene names: 59710881
Gene position: 282029-281055 (Counterclockwise)
Preceding gene: 59710882
Following gene: 59710880
Centisome position: 9.73
GC content: 41.95
Gene sequence:
>975_bases ATGGCATTACAAAATGTAATTAAAGCAACGGCTGTAGCTGCGGCAATGATGACTGCAGGTATGGGAACTGCAAGTGCCCA AGAATTCATAACCATTGGTACAGGTTCAGTAACTGGAGTTTACTACCCGACGGGTGGCGCAATCTGTAAATTAGTCAACA AAGATCGTAAAGAACACAATGTTCGTTGTTCTGTTGAATCAACAGGCGGCTCAATCTATAACGTAAATACCATTCGTTCT GGTGAATTAGATTTCGGTATTGTTCAGTCTGATTGGCAATACCATGGCTATAACGGTACCAGCAAATTTGAAGCCCAAGG CCCTTACAAAAAACTGCGCGCGATGTTCTCTCTTCATACAGAACCTTTTAACATCATAGCTCGTACTGACTCAGGTATTA ACAATGTTGCAGATCTTGAAGGCAAGCGTGTAAACATTGGTAATCCAGGTTCTGGTGACCGTGCAACCATGGGAGTTGTT ATGGATGCAATGGGTTGGACAAACGACAGCTTTAAGTTAGCTTCTGAACTTAAAGGTTCTGAGCGTTCACAAGCACTTTG TGATAATAAAATTGATGCATTCATCTATATGGTTGGTCACCCAAATGGCTCAATCAAAGAAGCAACAACCTCTTGTGATG CAAAATTGGTTTCAGCAACAGGGCCAGAGATCGATAAAATCGTAGCGGATAATCCTTATTACGCATACAGCACAGTACCT GCAGGTATGTACCGTGGTACTACAGGTGATGTAAATAGCTTTGGTGTAGCGGCAACAATGGTAACTACATCAGATGTTTC TGATGAAGTGGCTTACAGCGTTGCAAAAGCGGTATTTGAAAACTTCGATACGTTTAAGCGCCTACATCCAGCATTTGCTA CTTTGAAAAAAGAAGACATGGTTAAAGCAGGTCTTTCTATCCCACTACACCCAGGTGCAGTGAAATACTACAAAGAAGTC GGCCTACTAAAATAG
Upstream 100 bases:
>100_bases ATATAAAACACTTTATGATGAAGTGAATAAATACTGTTTTTTATCTTATACTTTTCATTAAGCTGTAGATAAAAAGCAAA ATAATAAGGAAGGGAATAAC
Downstream 100 bases:
>100_bases AAACACTTCTTTAGATAAAAGAGGTCATATGGCCTCTTTTATTCTTCGCTCTACTTTCTGATCTTTCTTTTAAACGGACA ATAATAATACCAACCACTCA
Product: immunogenic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MALQNVIKATAVAAAMMTAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRS GELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARTDSGINNVADLEGKRVNIGNPGSGDRATMGVV MDAMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAYSTVP AGMYRGTTGDVNSFGVAATMVTTSDVSDEVAYSVAKAVFENFDTFKRLHPAFATLKKEDMVKAGLSIPLHPGAVKYYKEV GLLK
Sequences:
>Translated_324_residues MALQNVIKATAVAAAMMTAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRS GELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARTDSGINNVADLEGKRVNIGNPGSGDRATMGVV MDAMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAYSTVP AGMYRGTTGDVNSFGVAATMVTTSDVSDEVAYSVAKAVFENFDTFKRLHPAFATLKKEDMVKAGLSIPLHPGAVKYYKEV GLLK >Mature_323_residues ALQNVIKATAVAAAMMTAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRSG ELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHTEPFNIIARTDSGINNVADLEGKRVNIGNPGSGDRATMGVVM DAMGWTNDSFKLASELKGSERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAYSTVPA GMYRGTTGDVNSFGVAATMVTTSDVSDEVAYSVAKAVFENFDTFKRLHPAFATLKKEDMVKAGLSIPLHPGAVKYYKEVG LLK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34689; Mature: 34557
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQNVIKATAVAAAMMTAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHN CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCC VRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHT EEEEEECCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCC EPFNIIARTDSGINNVADLEGKRVNIGNPGSGDRATMGVVMDAMGWTNDSFKLASELKGS CCEEEEEECCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC ERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAYSTVP CHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHEEECCCEEEEECCC AGMYRGTTGDVNSFGVAATMVTTSDVSDEVAYSVAKAVFENFDTFKRLHPAFATLKKEDM CCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGLSIPLHPGAVKYYKEVGLLK HHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure ALQNVIKATAVAAAMMTAGMGTASAQEFITIGTGSVTGVYYPTGGAICKLVNKDRKEHN CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHCCCCCCC VRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFEAQGPYKKLRAMFSLHT EEEEEECCCCEEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHHCC EPFNIIARTDSGINNVADLEGKRVNIGNPGSGDRATMGVVMDAMGWTNDSFKLASELKGS CCEEEEEECCCCCCCHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCC ERSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVSATGPEIDKIVADNPYYAYSTVP CHHHHHHCCCCEEEEEEEECCCCCCHHHHCCCCEEEEECCCCCHHHEEECCCEEEEECCC AGMYRGTTGDVNSFGVAATMVTTSDVSDEVAYSVAKAVFENFDTFKRLHPAFATLKKEDM CCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKAGLSIPLHPGAVKYYKEVGLLK HHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]