Click here to switch to the map view.

The map label for this gene is slyX [H]

Identifier: 59710831

GI number: 59710831

Start: 243991

End: 244215

Strand: Reverse

Name: slyX [H]

Synonym: VF_0224

Alternate gene names: 59710831

Gene position: 244215-243991 (Counterclockwise)

Preceding gene: 59710832

Following gene: 59710825

Centisome position: 8.43

GC content: 39.56

Gene sequence:

>225_bases
ATGACAACAACAATTGAACAATTAGAACAAAAGATCAGTGATTTAGAGTGTCAAATGGCGTTTCAAGAGCAAACCATTGA
TGAACTAAACGACGCCCTATCTCAGCAACAGCTATTAATCACTAATATGCAAGTTCAGATGAAGTTTATGGTAGGTAAGA
TGAAAACCATGGATTCGTCGAATATGGCGGATGCATCGGAAGAGACGCCACCACCGCATTACTAA

Upstream 100 bases:

>100_bases
GCCCACCAACAGCAGTAGTGTATGATGTCGCCATTGATAAACAACAACGAGTGGTTTCAGCAACATCAGCAGGAATCGCC
CAAGCGTGGTTAATAGAATA

Downstream 100 bases:

>100_bases
GTGCAGAAGCGAGAATCGAGAACGCTACGCTCTAGGAGCGAGAAAGAGCAAATCGAGCACTCAGAAGCCTAAAAACAAAA
AAACCGTAAATGCATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MTTTIEQLEQKISDLECQMAFQEQTIDELNDALSQQQLLITNMQVQMKFMVGKMKTMDSSNMADASEETPPPHY

Sequences:

>Translated_74_residues
MTTTIEQLEQKISDLECQMAFQEQTIDELNDALSQQQLLITNMQVQMKFMVGKMKTMDSSNMADASEETPPPHY
>Mature_73_residues
TTTIEQLEQKISDLECQMAFQEQTIDELNDALSQQQLLITNMQVQMKFMVGKMKTMDSSNMADASEETPPPHY

Specific function: Unknown

COG id: COG2900

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the slyX family [H]

Homologues:

Organism=Escherichia coli, GI1789747, Length=67, Percent_Identity=38.8059701492537, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007236 [H]

Pfam domain/function: PF04102 SlyX [H]

EC number: NA

Molecular weight: Translated: 8487; Mature: 8356

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
10.8 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
9.6 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTIEQLEQKISDLECQMAFQEQTIDELNDALSQQQLLITNMQVQMKFMVGKMKTMDSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NMADASEETPPPHY
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTIEQLEQKISDLECQMAFQEQTIDELNDALSQQQLLITNMQVQMKFMVGKMKTMDSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NMADASEETPPPHY
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA