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The map label for this gene is gntX [H]

Identifier: 59710724

GI number: 59710724

Start: 136161

End: 136880

Strand: Reverse

Name: gntX [H]

Synonym: VF_0117

Alternate gene names: 59710724

Gene position: 136880-136161 (Counterclockwise)

Preceding gene: 59710727

Following gene: 59710723

Centisome position: 4.72

GC content: 42.5

Gene sequence:

>720_bases
ATGGGTGGTTTAGTGTTCATCAGGTGGATAAGAAGATCAATACAAAAATTAGGCGTAAGTCATTGTGACTTTTGCTCACA
AGCAATGCCACCATCTGAAACCATTTGGTGCCAAGCTTGCTTAGATTTAATCAAAACAGTGCCTCGCTGTCAGCGATGTG
GTTTGCAAACCGAGCATGAGACCGATGTCTGCGGAGAGTGTCTTTTGAACCCACCACAATGGGACCGCTTATATTGTGTA
AGTGATTATTCTGAACCATTACGCGAATACATTAATAAACTTAAATACGCTCAACAGTTCTGGCTAGCCCAAGATTTAGG
CGTATTACTCAGTAAGCACATCCCTGAACCAGCGCCTCTCATTCTTCCTGTTCCTCTTCATTGGAAACGATTTTGGTGGC
GTTCTTACAATCAAAGTGATCATTTAGGTTGGACATTAGAAAGGGAGTTCAACCTTAAGTCGTCCACCACTCACTGTAAT
AACAAGATATTGAAGCGTGTAAAAGCGACAAGGCCTCAACAAGGTTTATCTCGCTCGTTTAGACAAACCAATTTACTCGG
CGCATTTAAAATCACTCAACCAATCAAAGAAAAACACGTTGCTCTTGTTGATGATGTGGTGACAACAGGTGCAACGATTA
ATCTGTTGTGTGTGGAATTAAGGAAAGCGGGAGTTGAGCGTATTGATGTGTATACGGTTTGTAGGACGGGGCGGAGTTAG

Upstream 100 bases:

>100_bases
CATTCCCCATCCATGAATGAGAACCAGATCGGAACCTTCGCCTTCCGTTTGCCAATAAAGAGGTGTTGTCATCTACACTG
CCTGTTAATGATTAATTAGT

Downstream 100 bases:

>100_bases
AAGCTATAAGAGCAAAGGCGAGGTTTCAGGTTTCAGGTTTCAGGTTTCAGGAAAATCAAAAGCAAGTACACCTGAAGCCT
GCAAGCGAAGCGACCTGAAT

Product: gluconate periplasmic binding protein

Products: NA

Alternate protein names: DNA transformation protein ComF; Protein COM101A [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MGGLVFIRWIRRSIQKLGVSHCDFCSQAMPPSETIWCQACLDLIKTVPRCQRCGLQTEHETDVCGECLLNPPQWDRLYCV
SDYSEPLREYINKLKYAQQFWLAQDLGVLLSKHIPEPAPLILPVPLHWKRFWWRSYNQSDHLGWTLEREFNLKSSTTHCN
NKILKRVKATRPQQGLSRSFRQTNLLGAFKITQPIKEKHVALVDDVVTTGATINLLCVELRKAGVERIDVYTVCRTGRS

Sequences:

>Translated_239_residues
MGGLVFIRWIRRSIQKLGVSHCDFCSQAMPPSETIWCQACLDLIKTVPRCQRCGLQTEHETDVCGECLLNPPQWDRLYCV
SDYSEPLREYINKLKYAQQFWLAQDLGVLLSKHIPEPAPLILPVPLHWKRFWWRSYNQSDHLGWTLEREFNLKSSTTHCN
NKILKRVKATRPQQGLSRSFRQTNLLGAFKITQPIKEKHVALVDDVVTTGATINLLCVELRKAGVERIDVYTVCRTGRS
>Mature_238_residues
GGLVFIRWIRRSIQKLGVSHCDFCSQAMPPSETIWCQACLDLIKTVPRCQRCGLQTEHETDVCGECLLNPPQWDRLYCVS
DYSEPLREYINKLKYAQQFWLAQDLGVLLSKHIPEPAPLILPVPLHWKRFWWRSYNQSDHLGWTLEREFNLKSSTTHCNN
KILKRVKATRPQQGLSRSFRQTNLLGAFKITQPIKEKHVALVDDVVTTGATINLLCVELRKAGVERIDVYTVCRTGRS

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=225, Percent_Identity=34.6666666666667, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 27609; Mature: 27478

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLVFIRWIRRSIQKLGVSHCDFCSQAMPPSETIWCQACLDLIKTVPRCQRCGLQTEHE
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDVCGECLLNPPQWDRLYCVSDYSEPLREYINKLKYAQQFWLAQDLGVLLSKHIPEPAPL
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ILPVPLHWKRFWWRSYNQSDHLGWTLEREFNLKSSTTHCNNKILKRVKATRPQQGLSRSF
EEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
RQTNLLGAFKITQPIKEKHVALVDDVVTTGATINLLCVELRKAGVERIDVYTVCRTGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
GGLVFIRWIRRSIQKLGVSHCDFCSQAMPPSETIWCQACLDLIKTVPRCQRCGLQTEHE
CCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TDVCGECLLNPPQWDRLYCVSDYSEPLREYINKLKYAQQFWLAQDLGVLLSKHIPEPAPL
HHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
ILPVPLHWKRFWWRSYNQSDHLGWTLEREFNLKSSTTHCNNKILKRVKATRPQQGLSRSF
EEECCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
RQTNLLGAFKITQPIKEKHVALVDDVVTTGATINLLCVELRKAGVERIDVYTVCRTGRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 1856167; 7542800 [H]