| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pyrL
Identifier: 172087660
GI number: 172087660
Start: 435173
End: 435262
Strand: Reverse
Name: pyrL
Synonym: VF_2588
Alternate gene names: NA
Gene position: 435262-435173 (Counterclockwise)
Preceding gene: 59711014
Following gene: 59711013
Centisome position: 15.02
GC content: 32.22
Gene sequence:
>90_bases GTGGTGGTCCCCTATTTTTTGATTTTCCTAATCAACCCAATTTTTAAAGCCTCCTATTTATTAGGGGGCTTTTTTTTGAT TTCAATATAA
Upstream 100 bases:
>100_bases AATTTGATACGAGTATAATTCCGCCCAATTTATTAGGGAATTATGATGTTATTAACTTATCTTCATACAGCGGTCGACCG AGTAGCTACATTGAAAAAAT
Downstream 100 bases:
>100_bases TACATAAGGGAAGAGAGACATGACTAACTCGCTATATCAAAAGCATATCATTTCTATTCCAGAGCTTTCTCGTCAAGAGT TAGAGCTGATCGTTGAAACG
Product: pyr operon leader peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 29; Mature: 29
Protein sequence:
>29_residues MVVPYFLIFLINPIFKASYLLGGFFLISI
Sequences:
>Translated_29_residues MVVPYFLIFLINPIFKASYLLGGFFLISI >Mature_29_residues MVVPYFLIFLINPIFKASYLLGGFFLISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3337; Mature: 3337
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVPYFLIFLINPIFKASYLLGGFFLISI CCHHHHHHHHHHHHHHHHHHHHHHHEEEC >Mature Secondary Structure MVVPYFLIFLINPIFKASYLLGGFFLISI CCHHHHHHHHHHHHHHHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA