| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617272
Identifier: 58617272
GI number: 58617272
Start: 883192
End: 884586
Strand: Reverse
Name: 58617272
Synonym: ERGA_CDS_05450
Alternate gene names: NA
Gene position: 884586-883192 (Counterclockwise)
Preceding gene: 58617273
Following gene: 58617271
Centisome position: 58.98
GC content: 29.39
Gene sequence:
>1395_bases ATGGTAGATGATAATAATAAACTTGATACTGAATCTAATACTTTAAATAATTTAGAAAAATATCATAACAAACCAAATAG TGTAATTAGTGATATAGTTTTATTACAGCTTAGTGGTGATGTAAGTGATGATTTTAAAGCTCTTGGCAAAATAAAGCTAG AAGATTTAGATATTCAGGAAACTATGCTACAGCTGGAAGAACAGTTTGATAGGTTTATTATAGAACAAGCTGGGCTTAGT AGTGTAATACAGAAGGATGGATATAATGATGCTTATAACTATAGTCTATCAAATGTTGTAGATCATACTGAAGATCTTGA GATAATAGAAGAATCCTTATTACAAAAAATATTAGATTTTTTTGTTGAATTATCTGAAGATAGTGAAGAAGATATATATT TTGAGTATGAACTTAATCCTTTAGAGCGTAAAAAAAGGAAAAAAAGGTTTATATTATTATCTATTATAGAATTTTTAAAA AAACTATTACGTGCTAATCGTAGACTAAGTCTCAAAGAATTAATAGAACAACAAATTTTAGAGTTACAAGAAAGGTTAAG TAAAGAGCAGGATCCTGAACTTAGAAAATTGCTTCATGAAAGGTTAATTCTTTTAATGCAATTAAAGGCTATGTTAATTG AAAAGGGTATTACTTCTAGTTTACTTATTAGTTGTTTATTAACTTCAAGTATTATTAGTTCTGTTATTAGGGTACAAGGG GAAGCTTCTTTTGGAGGTAGAGAACATGATAGTTTGTTACGTGATTTGTCTAAACTGTTGTTATTACAACAAAAAGATTC AAGTATTGTAAATGAAACAATTGCTAATACTTCTCAAGTAAGTCCTGTTGTTAGTCTGTCGAGTATATTAAATGCACAAA GCTATATTTCAGATACTTATCGTGGTTGTGTAAAGGAAGTATCTCATAAATTACACGATCAATATTATATGATGATGCAT AGAGATCATATGTCTGTTCAGCAGGTACCTAATGTTGGTATGTTTGCTGTTGTATATGCTATAATGCGTGCAGTAGATTA TGCTATAGGAAAAGTTAAAGATGCTGTTTCTAAGGTTTTTCACTCTGATAGATCTGAAGTACCTGTTATGCACCGTAGGC ATAGTATTCCTGCTTCTGTTAAGCCTGAAAGTACTTTAAATATGGGATCTGAAAGTGCTGCTAGCTATGATTATAAATGT AGTTTTGTAAGTGTGAGTCAAAGTGTTACTTATAGTACTCAAAGTATGATGGGTTATATGTCATCGTATAGTTATCACAG TGAGTATAGATTTTCTTCGATGGAAATTAAAAATAATAGTTATTTAGATAGTATAAAAGTTAAGGAAATGTCTCAAACCT GTAGTACTTCTCAATCATTAAAGTTAGGGAATTAA
Upstream 100 bases:
>100_bases TATATCATATGTTGGGATTGAGTTTAGATTTTGATTAATAAATATTACATATTATGTAATTCATGATATGTTGTTATAGG AATATTGATGGTGTATCTCC
Downstream 100 bases:
>100_bases GTATGACAAAGTATTCTTCACTTGAAAAAATATTATGCTTCTTAATTATAACATATGATATGTCAAGCTGAAGCAATAAA CAGATAGTTATAGTATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MVDDNNKLDTESNTLNNLEKYHNKPNSVISDIVLLQLSGDVSDDFKALGKIKLEDLDIQETMLQLEEQFDRFIIEQAGLS SVIQKDGYNDAYNYSLSNVVDHTEDLEIIEESLLQKILDFFVELSEDSEEDIYFEYELNPLERKKRKKRFILLSIIEFLK KLLRANRRLSLKELIEQQILELQERLSKEQDPELRKLLHERLILLMQLKAMLIEKGITSSLLISCLLTSSIISSVIRVQG EASFGGREHDSLLRDLSKLLLLQQKDSSIVNETIANTSQVSPVVSLSSILNAQSYISDTYRGCVKEVSHKLHDQYYMMMH RDHMSVQQVPNVGMFAVVYAIMRAVDYAIGKVKDAVSKVFHSDRSEVPVMHRRHSIPASVKPESTLNMGSESAASYDYKC SFVSVSQSVTYSTQSMMGYMSSYSYHSEYRFSSMEIKNNSYLDSIKVKEMSQTCSTSQSLKLGN
Sequences:
>Translated_464_residues MVDDNNKLDTESNTLNNLEKYHNKPNSVISDIVLLQLSGDVSDDFKALGKIKLEDLDIQETMLQLEEQFDRFIIEQAGLS SVIQKDGYNDAYNYSLSNVVDHTEDLEIIEESLLQKILDFFVELSEDSEEDIYFEYELNPLERKKRKKRFILLSIIEFLK KLLRANRRLSLKELIEQQILELQERLSKEQDPELRKLLHERLILLMQLKAMLIEKGITSSLLISCLLTSSIISSVIRVQG EASFGGREHDSLLRDLSKLLLLQQKDSSIVNETIANTSQVSPVVSLSSILNAQSYISDTYRGCVKEVSHKLHDQYYMMMH RDHMSVQQVPNVGMFAVVYAIMRAVDYAIGKVKDAVSKVFHSDRSEVPVMHRRHSIPASVKPESTLNMGSESAASYDYKC SFVSVSQSVTYSTQSMMGYMSSYSYHSEYRFSSMEIKNNSYLDSIKVKEMSQTCSTSQSLKLGN >Mature_464_residues MVDDNNKLDTESNTLNNLEKYHNKPNSVISDIVLLQLSGDVSDDFKALGKIKLEDLDIQETMLQLEEQFDRFIIEQAGLS SVIQKDGYNDAYNYSLSNVVDHTEDLEIIEESLLQKILDFFVELSEDSEEDIYFEYELNPLERKKRKKRFILLSIIEFLK KLLRANRRLSLKELIEQQILELQERLSKEQDPELRKLLHERLILLMQLKAMLIEKGITSSLLISCLLTSSIISSVIRVQG EASFGGREHDSLLRDLSKLLLLQQKDSSIVNETIANTSQVSPVVSLSSILNAQSYISDTYRGCVKEVSHKLHDQYYMMMH RDHMSVQQVPNVGMFAVVYAIMRAVDYAIGKVKDAVSKVFHSDRSEVPVMHRRHSIPASVKPESTLNMGSESAASYDYKC SFVSVSQSVTYSTQSMMGYMSSYSYHSEYRFSSMEIKNNSYLDSIKVKEMSQTCSTSQSLKLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53039; Mature: 53039
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDNNKLDTESNTLNNLEKYHNKPNSVISDIVLLQLSGDVSDDFKALGKIKLEDLDIQE CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCHHH TMLQLEEQFDRFIIEQAGLSSVIQKDGYNDAYNYSLSNVVDHTEDLEIIEESLLQKILDF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH FVELSEDSEEDIYFEYELNPLERKKRKKRFILLSIIEFLKKLLRANRRLSLKELIEQQIL HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ELQERLSKEQDPELRKLLHERLILLMQLKAMLIEKGITSSLLISCLLTSSIISSVIRVQG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC EASFGGREHDSLLRDLSKLLLLQQKDSSIVNETIANTSQVSPVVSLSSILNAQSYISDTY CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGCVKEVSHKLHDQYYMMMHRDHMSVQQVPNVGMFAVVYAIMRAVDYAIGKVKDAVSKVF HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HSDRSEVPVMHRRHSIPASVKPESTLNMGSESAASYDYKCSFVSVSQSVTYSTQSMMGYM HCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SSYSYHSEYRFSSMEIKNNSYLDSIKVKEMSQTCSTSQSLKLGN HHCCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVDDNNKLDTESNTLNNLEKYHNKPNSVISDIVLLQLSGDVSDDFKALGKIKLEDLDIQE CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHCCCCCCCCCHHH TMLQLEEQFDRFIIEQAGLSSVIQKDGYNDAYNYSLSNVVDHTEDLEIIEESLLQKILDF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH FVELSEDSEEDIYFEYELNPLERKKRKKRFILLSIIEFLKKLLRANRRLSLKELIEQQIL HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ELQERLSKEQDPELRKLLHERLILLMQLKAMLIEKGITSSLLISCLLTSSIISSVIRVQG HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC EASFGGREHDSLLRDLSKLLLLQQKDSSIVNETIANTSQVSPVVSLSSILNAQSYISDTY CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RGCVKEVSHKLHDQYYMMMHRDHMSVQQVPNVGMFAVVYAIMRAVDYAIGKVKDAVSKVF HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HSDRSEVPVMHRRHSIPASVKPESTLNMGSESAASYDYKCSFVSVSQSVTYSTQSMMGYM HCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH SSYSYHSEYRFSSMEIKNNSYLDSIKVKEMSQTCSTSQSLKLGN HHCCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA