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The map label for this gene is fimZ [C]

Identifier: 56965228

GI number: 56965228

Start: 3598610

End: 3599230

Strand: Direct

Name: fimZ [C]

Synonym: ABC3466

Alternate gene names: 56965228

Gene position: 3598610-3599230 (Clockwise)

Preceding gene: 56965223

Following gene: 56965239

Centisome position: 83.61

GC content: 41.71

Gene sequence:

>621_bases
ATGAACTTATTATTTATTTCAAAAAAAGGCTTGCTTGCCGACATGTTCCGTTACCGTATAGCAGAAACCGACAGTCAGCT
GTGCGTTGTCCACACAGCTCATGAGATAGAAACGTGTCTTGCCGATTTTTCAGTAGACATCGCCATCGTCTATGGAGAAC
AGTCAGACAGTGTCGCTTTTATTAAACAACTGCGCGCTAGCGATCCTCAGTTGCCGTTGCTTGTGCTGGCAGATAGGGCG
ACATATGAGTACATCAAAGTTTGTAGGGATTATGGTGTCAATGGACTTCTATCGACAAACACCAACTTTCAACAATTAAT
GGCAAAAGCAGCCAGAATCTTGCAGGGCGAGTCCATTTATGATACCTATTTATTGGAAGAGGAATCGACTCATTTGGCCC
GTGTCCACTTCTCCCGCATGGAAAGAAAAGTAATCGCTTACATAGTGGCTGACTACCCTAACAAAAAAATCGCCCAAGAA
ATGGCGATTCATGAAGGGACTGTAAGAAACTATATCAGTAACATTTATAGCAAAATTGGTCTTCATCGCCGTAAAGAGGC
AAAACAACTTTTAAAGAAATGGATGGAAAAGGATAAAGAAGATAGTAGAACAAAGAGGTGA

Upstream 100 bases:

>100_bases
ACTAGGCTTGGCGGAATGTTTAGAAATTGTACAGGTCGTCACATTACGGTAGAGGTGTGAGCACTAATGGAAAGGGTTGA
TTTACAGTCATGATGGTGCG

Downstream 100 bases:

>100_bases
AATTTTTCGCTTATTCCGATCATAATGGCTAGTCTTTCCCGCTGCGGATTGAAAGTAGCGGACGATCAAATCGAAGGGTG
AGGATGTTTATGCCAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNLLFISKKGLLADMFRYRIAETDSQLCVVHTAHEIETCLADFSVDIAIVYGEQSDSVAFIKQLRASDPQLPLLVLADRA
TYEYIKVCRDYGVNGLLSTNTNFQQLMAKAARILQGESIYDTYLLEEESTHLARVHFSRMERKVIAYIVADYPNKKIAQE
MAIHEGTVRNYISNIYSKIGLHRRKEAKQLLKKWMEKDKEDSRTKR

Sequences:

>Translated_206_residues
MNLLFISKKGLLADMFRYRIAETDSQLCVVHTAHEIETCLADFSVDIAIVYGEQSDSVAFIKQLRASDPQLPLLVLADRA
TYEYIKVCRDYGVNGLLSTNTNFQQLMAKAARILQGESIYDTYLLEEESTHLARVHFSRMERKVIAYIVADYPNKKIAQE
MAIHEGTVRNYISNIYSKIGLHRRKEAKQLLKKWMEKDKEDSRTKR
>Mature_206_residues
MNLLFISKKGLLADMFRYRIAETDSQLCVVHTAHEIETCLADFSVDIAIVYGEQSDSVAFIKQLRASDPQLPLLVLADRA
TYEYIKVCRDYGVNGLLSTNTNFQQLMAKAARILQGESIYDTYLLEEESTHLARVHFSRMERKVIAYIVADYPNKKIAQE
MAIHEGTVRNYISNIYSKIGLHRRKEAKQLLKKWMEKDKEDSRTKR

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23799; Mature: 23799

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLFISKKGLLADMFRYRIAETDSQLCVVHTAHEIETCLADFSVDIAIVYGEQSDSVAF
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCEEEEEEECCCCCHHHH
IKQLRASDPQLPLLVLADRATYEYIKVCRDYGVNGLLSTNTNFQQLMAKAARILQGESIY
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCHH
DTYLLEEESTHLARVHFSRMERKVIAYIVADYPNKKIAQEMAIHEGTVRNYISNIYSKIG
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LHRRKEAKQLLKKWMEKDKEDSRTKR
CHHHHHHHHHHHHHHHCCCHHCCCCC
>Mature Secondary Structure
MNLLFISKKGLLADMFRYRIAETDSQLCVVHTAHEIETCLADFSVDIAIVYGEQSDSVAF
CCEEEEECCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCEEEEEEECCCCCHHHH
IKQLRASDPQLPLLVLADRATYEYIKVCRDYGVNGLLSTNTNFQQLMAKAARILQGESIY
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHCCCCHH
DTYLLEEESTHLARVHFSRMERKVIAYIVADYPNKKIAQEMAIHEGTVRNYISNIYSKIG
HHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LHRRKEAKQLLKKWMEKDKEDSRTKR
CHHHHHHHHHHHHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA