Click here to switch to the map view.

The map label for this gene is ykvU [H]

Identifier: 56963032

GI number: 56963032

Start: 1378433

End: 1379767

Strand: Direct

Name: ykvU [H]

Synonym: ABC1260

Alternate gene names: 56963032

Gene position: 1378433-1379767 (Clockwise)

Preceding gene: 56963031

Following gene: 56963035

Centisome position: 32.03

GC content: 44.19

Gene sequence:

>1335_bases
GTGAATACGTTTTTTCGAGGGGTTCTCGTGCTGAGCGCCGCGGCGTTTGTAGGGGAATGTTTGGAGTTTATGATCAACGT
TGTATTGGCAAGAGAGCTCGGCGATGAAGCGTTCGGTTTGTACATGGCGATTTTGCCAACAATGCTATTTGTTGTCGTCC
TGGCAAGCATTGAATTGCCCGTTTCTGTATCTAAGTTAATTGCCGAGAAAGAACCTGTCTACCATTGGCATGTACTCGGC
AAAGCGCTGCAACTCGCGTTCGTTTGTGCCCTTGCTGTCATGATTGGTGCCTTGATTGTGTTTCCCCATCTAAGTGTGCT
CCACTCTTATCATGCAGGCGTTAGATGGATGCTCGTGCTGCTCGTGCCAATCATTACGTTTTCGTCAGTGGCAAGAGGGT
ATTTGATGGGCGCCCAGGAGACAGGGAAAATTGCTGTGGCCAATTTATTGAAACGGTCGACGCAATTAGCTGGTTTGCTC
GTCGTGTTTAAATTGTTTTCCTTTGAAAGCCACATCGCTATTTTTATGGCGTTGCTAGCATTAAAATTAAGCGAACTGTT
TGTATTAATTTATTTGGTTATTGTATTTATAGGGAAAATACGAGAGACGAAAAAAGCACATGTCCAGAAAAAAGGGCCTA
AAAAAGAGGTTTATCAAAAACTGTTGCAAGTATCATTGCCAACAACGGGTTTGCGCATTTTTCACTCCGCTACATTTGCG
ATTAAACCTTTTTTGATTACGAAAGCTTTGTCCAATGCAGGGATGATCGAAAGCGTGGCCATGGTCCACTATGGGAAATT
GTCTGGCATTGCCTTTACAATTGGCTTTTTTCCAGCTTTTATTGCCCATGCCTTGTTAGTTGTGCTCATTCCAATTGTTT
CGGATGCTTATGCAAAACGCCATTACGATGTGCTCCATCATTACTTGCGGCTGTCCTTGCTTGTCACAGTGGTGTATGGC
GCGCCAGTCGTGCTCGCCTTCTTTTTCTTTGCAGAACCGATTACAACCGCTTTTTTTGGACCTTCTCCAGCGGCAGGCTA
CTTGCAAGTATTGATCCCTTATTTCTTATTCCATTATTTTTCAACGCCGCTGCAAGCCTATTTAATTGGCATTGGCTTAG
TCAAAGACGCGTTCTTGCATTCGTTATACGCAACAACCGTTTCGTTTTGCCTCATGATTGCCCTCGGCTCGATGCCAAGC
TTGAAAATGGACGGCATCATATTAGGAATGAATATGGGTGCTGTGCTCCTTACCTCGTTGCATTACGTGACCATTTGCAA
AAAGCTGAATTTAAACGCACTCATGCGTCCAGGAGAAAGCTGGATATTTAAATAA

Upstream 100 bases:

>100_bases
ACTCACCTGAGCGCAGGCCTTTTTTATGCTTTCAAAAACATACCCATATTTTAATATCTTGTCTCATAGCCTGTATAGAG
AGAAAAAGGAGAGATGAACG

Downstream 100 bases:

>100_bases
GGAACCCCCCTTTTTTAAGCGAGGGGGGGGGAGAAACCTCTAATTTTGCTTGGCTTTCTTGCCGTTTTTGCTTTCATTAT
GAAGGCGGTCCAATGCAGTG

Product: stage V sporulation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MNTFFRGVLVLSAAAFVGECLEFMINVVLARELGDEAFGLYMAILPTMLFVVVLASIELPVSVSKLIAEKEPVYHWHVLG
KALQLAFVCALAVMIGALIVFPHLSVLHSYHAGVRWMLVLLVPIITFSSVARGYLMGAQETGKIAVANLLKRSTQLAGLL
VVFKLFSFESHIAIFMALLALKLSELFVLIYLVIVFIGKIRETKKAHVQKKGPKKEVYQKLLQVSLPTTGLRIFHSATFA
IKPFLITKALSNAGMIESVAMVHYGKLSGIAFTIGFFPAFIAHALLVVLIPIVSDAYAKRHYDVLHHYLRLSLLVTVVYG
APVVLAFFFFAEPITTAFFGPSPAAGYLQVLIPYFLFHYFSTPLQAYLIGIGLVKDAFLHSLYATTVSFCLMIALGSMPS
LKMDGIILGMNMGAVLLTSLHYVTICKKLNLNALMRPGESWIFK

Sequences:

>Translated_444_residues
MNTFFRGVLVLSAAAFVGECLEFMINVVLARELGDEAFGLYMAILPTMLFVVVLASIELPVSVSKLIAEKEPVYHWHVLG
KALQLAFVCALAVMIGALIVFPHLSVLHSYHAGVRWMLVLLVPIITFSSVARGYLMGAQETGKIAVANLLKRSTQLAGLL
VVFKLFSFESHIAIFMALLALKLSELFVLIYLVIVFIGKIRETKKAHVQKKGPKKEVYQKLLQVSLPTTGLRIFHSATFA
IKPFLITKALSNAGMIESVAMVHYGKLSGIAFTIGFFPAFIAHALLVVLIPIVSDAYAKRHYDVLHHYLRLSLLVTVVYG
APVVLAFFFFAEPITTAFFGPSPAAGYLQVLIPYFLFHYFSTPLQAYLIGIGLVKDAFLHSLYATTVSFCLMIALGSMPS
LKMDGIILGMNMGAVLLTSLHYVTICKKLNLNALMRPGESWIFK
>Mature_444_residues
MNTFFRGVLVLSAAAFVGECLEFMINVVLARELGDEAFGLYMAILPTMLFVVVLASIELPVSVSKLIAEKEPVYHWHVLG
KALQLAFVCALAVMIGALIVFPHLSVLHSYHAGVRWMLVLLVPIITFSSVARGYLMGAQETGKIAVANLLKRSTQLAGLL
VVFKLFSFESHIAIFMALLALKLSELFVLIYLVIVFIGKIRETKKAHVQKKGPKKEVYQKLLQVSLPTTGLRIFHSATFA
IKPFLITKALSNAGMIESVAMVHYGKLSGIAFTIGFFPAFIAHALLVVLIPIVSDAYAKRHYDVLHHYLRLSLLVTVVYG
APVVLAFFFFAEPITTAFFGPSPAAGYLQVLIPYFLFHYFSTPLQAYLIGIGLVKDAFLHSLYATTVSFCLMIALGSMPS
LKMDGIILGMNMGAVLLTSLHYVTICKKLNLNALMRPGESWIFK

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Forespore membrane; Multi-pass membrane protein (Potential). Note=Integral membrane protein. Shortly after the initiation of the engulfment, is localized to the sporulation septum. During later stages of sporulation, remains associated with the outer fore

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 48926; Mature: 48926

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12662922 [H]