| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is treP [H]
Identifier: 56963035
GI number: 56963035
Start: 1383421
End: 1384854
Strand: Direct
Name: treP [H]
Synonym: ABC1263
Alternate gene names: 56963035
Gene position: 1383421-1384854 (Clockwise)
Preceding gene: 56963032
Following gene: 56963036
Centisome position: 32.14
GC content: 46.72
Gene sequence:
>1434_bases ATGGCAATTAACTACCGTGAAACAGCGGAACAGATTCTTGCCGCTATAGGTGGCGAGGAAAATATTTCTTCGGCAACGCA TTGCGTAACACGGCTTCGGCTTGTGCTTAACGATGAAAACGAAGTGGATACAAGCGGTTTAGAGGCAATTGAAGCAGTAA AAGGAACGTTTACTGCGAGCGGCCAATTCCAGATTATTCTTGGCAATGGCGTTGTAGATAAAGTATATAAGGAATTGATG GCTCTCACAGGGCGCGAGGAGCAAAGCAAAGACGAGGTGAAAGCGGAAGCCGCTAAAAAAGGGAGCCCTTTGCAACGGGC AATTAAAGTGCTGGCGGATGTCTTTATCCCGATTTTGCCGGCAATTGTCACAGCCGGTTTGTTAATGGGCATCAACAACA TTTTAACGGGAAATGACATTTTTTACACAGGGGCGTCCATTATTGACGTTCACCCACAGTGGGCTGATTTTGCTGACATT ATCCACGTTATCGCTAATACAGCGTTCACGTTTTTGCCAGCACTGATTGGGTGGTCTGCAGTCAAACGTTTTGGCGGCAA CCCATTGCTTGGAATTGTGATGGGGCTAATCCTAGTCCATCCTGCTTTGTTAAACGCCTGGGATTATGGCGCTGCCCGTG AGGCGGGGGAAATCCCAACTTGGAATTTATTTGGTCTTGAAATCAATAAACTTGGCTATCAAGGGCAAGTGCTTCCTGTA TTTGTGGCATCGATCATTTTAGCCAAGTTGGAACTATTCTTGCGCAAACGGATACCAGACGCGTTCCATTTACTGACGGT TGCTCCGTTAGCATTGCTCATCACAAGTTTTATTACATTTATTGCAGTAGGCCCGCTTACATTTGCAATTGGGAATTGGA TTGCCGATGGTTTTATTTGGCTGTTTGCGACACTGCCTTGGATTGCAGGTTTCTTATACGGAATTATTTATGGCCCCCTT GTCATTACGGGGATGCACCATACATTCCTTGCTGTCGATTTGCAACTCGTTGGTTCAGGCAACGGCACGTTCTTGTGGCC AATTTTGGCGCTGTCTAATATTGCCCAAGGTTCAGCTGCGTTTGCGATGTATTTTCTCGTCAAAAATGCCAATTTAAAAG GGCTAGCGGGGACATCAGGTTTATCAGCTTGGCTCGGCATTACAGAACCAGCCCTTTTCGGTGTCAACTTGCGCTTCCGC TTCCCGTTTTATGCGGCAATTGTAAGCGCGGGAATCGCCGGTATGTTTATTACCATGCAAAACGTCATCGCCAATTCGAT CGGCGTAGGGGGCGTGCCTGGCTTCGTATCGATTCGTCCAACAGACTGGATCCCATTCTTTATTGGCATGGCGATCGTGA TTGTATTGCCATTCCTCATTACGTTGTTATACGGCAGGCTCCGTCAGCCAAAAAGTTTGCAAGAAGATCATTAA
Upstream 100 bases:
>100_bases GGTTATTATTGAAGCGTTATCATCCATATTTGTATATACAAATTCCGAGGATACATGGAAAATGAGCGTTTTGAAAACGC TGACAGAGGAGGAGCAACAG
Downstream 100 bases:
>100_bases AGACATTCTCAAGGAACTGCTAAGCAGTTCCTTTTTTGAACTTGTATATACAAGTGTGCTAAACTGGTGGTAAATAGAGA CAGAGAAAGGTGGATAAACA
Product: PTS system, trehalose-specific enzyme II, BC component
Products: NA
Alternate protein names: EIIBC-Tre; EII-Tre; Trehalose-specific phosphotransferase enzyme IIB component; PTS system trehalose-specific EIIB component; Trehalose permease IIC component; PTS system trehalose-specific EIIC component [H]
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MAINYRETAEQILAAIGGEENISSATHCVTRLRLVLNDENEVDTSGLEAIEAVKGTFTASGQFQIILGNGVVDKVYKELM ALTGREEQSKDEVKAEAAKKGSPLQRAIKVLADVFIPILPAIVTAGLLMGINNILTGNDIFYTGASIIDVHPQWADFADI IHVIANTAFTFLPALIGWSAVKRFGGNPLLGIVMGLILVHPALLNAWDYGAAREAGEIPTWNLFGLEINKLGYQGQVLPV FVASIILAKLELFLRKRIPDAFHLLTVAPLALLITSFITFIAVGPLTFAIGNWIADGFIWLFATLPWIAGFLYGIIYGPL VITGMHHTFLAVDLQLVGSGNGTFLWPILALSNIAQGSAAFAMYFLVKNANLKGLAGTSGLSAWLGITEPALFGVNLRFR FPFYAAIVSAGIAGMFITMQNVIANSIGVGGVPGFVSIRPTDWIPFFIGMAIVIVLPFLITLLYGRLRQPKSLQEDH
Sequences:
>Translated_477_residues MAINYRETAEQILAAIGGEENISSATHCVTRLRLVLNDENEVDTSGLEAIEAVKGTFTASGQFQIILGNGVVDKVYKELM ALTGREEQSKDEVKAEAAKKGSPLQRAIKVLADVFIPILPAIVTAGLLMGINNILTGNDIFYTGASIIDVHPQWADFADI IHVIANTAFTFLPALIGWSAVKRFGGNPLLGIVMGLILVHPALLNAWDYGAAREAGEIPTWNLFGLEINKLGYQGQVLPV FVASIILAKLELFLRKRIPDAFHLLTVAPLALLITSFITFIAVGPLTFAIGNWIADGFIWLFATLPWIAGFLYGIIYGPL VITGMHHTFLAVDLQLVGSGNGTFLWPILALSNIAQGSAAFAMYFLVKNANLKGLAGTSGLSAWLGITEPALFGVNLRFR FPFYAAIVSAGIAGMFITMQNVIANSIGVGGVPGFVSIRPTDWIPFFIGMAIVIVLPFLITLLYGRLRQPKSLQEDH >Mature_476_residues AINYRETAEQILAAIGGEENISSATHCVTRLRLVLNDENEVDTSGLEAIEAVKGTFTASGQFQIILGNGVVDKVYKELMA LTGREEQSKDEVKAEAAKKGSPLQRAIKVLADVFIPILPAIVTAGLLMGINNILTGNDIFYTGASIIDVHPQWADFADII HVIANTAFTFLPALIGWSAVKRFGGNPLLGIVMGLILVHPALLNAWDYGAAREAGEIPTWNLFGLEINKLGYQGQVLPVF VASIILAKLELFLRKRIPDAFHLLTVAPLALLITSFITFIAVGPLTFAIGNWIADGFIWLFATLPWIAGFLYGIIYGPLV ITGMHHTFLAVDLQLVGSGNGTFLWPILALSNIAQGSAAFAMYFLVKNANLKGLAGTSGLSAWLGITEPALFGVNLRFRF PFYAAIVSAGIAGMFITMQNVIANSIGVGGVPGFVSIRPTDWIPFFIGMAIVIVLPFLITLLYGRLRQPKSLQEDH
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI2367362, Length=439, Percent_Identity=38.2687927107062, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1790159, Length=476, Percent_Identity=28.9915966386555, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI48994906, Length=478, Percent_Identity=28.2426778242678, Blast_Score=168, Evalue=7e-43, Organism=Escherichia coli, GI1788769, Length=424, Percent_Identity=29.7169811320755, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011296 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 51465; Mature: 51334
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINYRETAEQILAAIGGEENISSATHCVTRLRLVLNDENEVDTSGLEAIEAVKGTFTAS CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEECC GQFQIILGNGVVDKVYKELMALTGREEQSKDEVKAEAAKKGSPLQRAIKVLADVFIPILP CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIVTAGLLMGINNILTGNDIFYTGASIIDVHPQWADFADIIHVIANTAFTFLPALIGWSA HHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKRFGGNPLLGIVMGLILVHPALLNAWDYGAAREAGEIPTWNLFGLEINKLGYQGQVLPV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHH FVASIILAKLELFLRKRIPDAFHLLTVAPLALLITSFITFIAVGPLTFAIGNWIADGFIW HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFATLPWIAGFLYGIIYGPLVITGMHHTFLAVDLQLVGSGNGTFLWPILALSNIAQGSAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHH FAMYFLVKNANLKGLAGTSGLSAWLGITEPALFGVNLRFRFPFYAAIVSAGIAGMFITMQ HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHH NVIANSIGVGGVPGFVSIRPTDWIPFFIGMAIVIVLPFLITLLYGRLRQPKSLQEDH HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AINYRETAEQILAAIGGEENISSATHCVTRLRLVLNDENEVDTSGLEAIEAVKGTFTAS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEECC GQFQIILGNGVVDKVYKELMALTGREEQSKDEVKAEAAKKGSPLQRAIKVLADVFIPILP CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIVTAGLLMGINNILTGNDIFYTGASIIDVHPQWADFADIIHVIANTAFTFLPALIGWSA HHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VKRFGGNPLLGIVMGLILVHPALLNAWDYGAAREAGEIPTWNLFGLEINKLGYQGQVLPV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHH FVASIILAKLELFLRKRIPDAFHLLTVAPLALLITSFITFIAVGPLTFAIGNWIADGFIW HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFATLPWIAGFLYGIIYGPLVITGMHHTFLAVDLQLVGSGNGTFLWPILALSNIAQGSAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHH FAMYFLVKNANLKGLAGTSGLSAWLGITEPALFGVNLRFRFPFYAAIVSAGIAGMFITMQ HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHH NVIANSIGVGGVPGFVSIRPTDWIPFFIGMAIVIVLPFLITLLYGRLRQPKSLQEDH HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917076; 8969503; 9272861; 9384377; 7651129 [H]