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The map label for this gene is yjjW [C]

Identifier: 55981679

GI number: 55981679

Start: 1604610

End: 1605662

Strand: Direct

Name: yjjW [C]

Synonym: TTHA1710

Alternate gene names: 55981679

Gene position: 1604610-1605662 (Clockwise)

Preceding gene: 55981675

Following gene: 55981680

Centisome position: 86.75

GC content: 68.28

Gene sequence:

>1053_bases
ATGACCCTGGCCGCCACCCTAAGGGAAGCAGACCTCTTCCGCTCCCTTCCCAAAGGCTTTGTCCAGTGCCGGGCCTGCGC
CCACTACTGCGCCCTCCCCGAGGGCGGGGCGGGGAAGTGCGGGGTGCGGCGCAACCTCGGGGGTAGGCTCTACCTGGTCA
CCTACGGCAAGGCGGCCGCCCTTCACCTGGACCCGGTGGAGAAGAAGCCCCTCTACCACTTCCACCCCGGGGAAGGCATC
CTCTCCGTGGGCACCGTGGGGTGCAACCTTTTCTGCGCCTTCTGCCAGAACTGGCAGATCTCCCAGTTCCGGGAGTTTCG
GGTCTCCCCGGAAGGGCGCCTGGACCGCCCCATCGGCGAGGACTGGCCCCCGAAGCGCCTCGTGGCGGAGGCAGAGGCCC
TGGGCGTGAGGCTTCTCGCCTACACCTACAACGAGCCCGCCGTCTGGATAGAGTACGCCCACGACACCGCCCGCCTGGCC
AAGGCCCGGGGGATGAAGAACGTCTTCGTGACGAGCGGGTTTGAGACCAAAGAGGCCTGGGACTACATCAGGCCCCACCT
GGACGCGGCCAACGTGGACCTGAAGGGCTTCACGGAGAAGTTCTACCGGGAGGTCTGTGGGGCCCGGCTCAAGCCCGTGC
TGGAAAGCCTGGGACACCTGGTGGCGAGCGGGGTGTGGGTGGAGGTCACCACGCTTCTCCTGGAGGGCTATAACGACTCG
GACGAGGAGGTCCGGGCCATGGCCCGCTTCCTCAAGGGGCTCTCCCCCGACATCCCCTGGCACCTCACCGCCGCCCATCC
CGACTACCGCATGCTGGACCTGAGGTCCACCCGGCACGCCACCCTGGTCCGGGCCCACGCCATCGCCAAGGAGGAGGGCC
TGAGGTTCGTGTACGTGGGCAACGTCCTGGACGAGGAAAGGAACTCCACTTATTGCCCCAACTGCGGCAGGCTCCTGGTG
CGCCGGCGGGGCTACCGGGTGGAGGCCCTGTGGGAGGCCCCGGGGGTCTGCCCCGGGTGCGGCCAGCGCATCCCCGGCGT
ATGGACCTGGTGA

Upstream 100 bases:

>100_bases
GGAGGACCTCCTCGGGGAAAAAGGCGGCGAAGTCCTCCTCCTTCTCCGGGGGAAAAAGCGCCACGGCCCCAGTTTGCTAC
AATGAGACCAGCGGTATCAA

Downstream 100 bases:

>100_bases
GGCCCCCTCAGGTGGCGGGGTATTTTTACCCCGGGGAAAAGGCGGCCCTGAAGGAGGAGGTGAAAGCCCTCCTGGCCGGG
GCCCGCACCCCGCCCCTACC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTLAATLREADLFRSLPKGFVQCRACAHYCALPEGGAGKCGVRRNLGGRLYLVTYGKAAALHLDPVEKKPLYHFHPGEGI
LSVGTVGCNLFCAFCQNWQISQFREFRVSPEGRLDRPIGEDWPPKRLVAEAEALGVRLLAYTYNEPAVWIEYAHDTARLA
KARGMKNVFVTSGFETKEAWDYIRPHLDAANVDLKGFTEKFYREVCGARLKPVLESLGHLVASGVWVEVTTLLLEGYNDS
DEEVRAMARFLKGLSPDIPWHLTAAHPDYRMLDLRSTRHATLVRAHAIAKEEGLRFVYVGNVLDEERNSTYCPNCGRLLV
RRRGYRVEALWEAPGVCPGCGQRIPGVWTW

Sequences:

>Translated_350_residues
MTLAATLREADLFRSLPKGFVQCRACAHYCALPEGGAGKCGVRRNLGGRLYLVTYGKAAALHLDPVEKKPLYHFHPGEGI
LSVGTVGCNLFCAFCQNWQISQFREFRVSPEGRLDRPIGEDWPPKRLVAEAEALGVRLLAYTYNEPAVWIEYAHDTARLA
KARGMKNVFVTSGFETKEAWDYIRPHLDAANVDLKGFTEKFYREVCGARLKPVLESLGHLVASGVWVEVTTLLLEGYNDS
DEEVRAMARFLKGLSPDIPWHLTAAHPDYRMLDLRSTRHATLVRAHAIAKEEGLRFVYVGNVLDEERNSTYCPNCGRLLV
RRRGYRVEALWEAPGVCPGCGQRIPGVWTW
>Mature_349_residues
TLAATLREADLFRSLPKGFVQCRACAHYCALPEGGAGKCGVRRNLGGRLYLVTYGKAAALHLDPVEKKPLYHFHPGEGIL
SVGTVGCNLFCAFCQNWQISQFREFRVSPEGRLDRPIGEDWPPKRLVAEAEALGVRLLAYTYNEPAVWIEYAHDTARLAK
ARGMKNVFVTSGFETKEAWDYIRPHLDAANVDLKGFTEKFYREVCGARLKPVLESLGHLVASGVWVEVTTLLLEGYNDSD
EEVRAMARFLKGLSPDIPWHLTAAHPDYRMLDLRSTRHATLVRAHAIAKEEGLRFVYVGNVLDEERNSTYCPNCGRLLVR
RRGYRVEALWEAPGVCPGCGQRIPGVWTW

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39321; Mature: 39189

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAATLREADLFRSLPKGFVQCRACAHYCALPEGGAGKCGVRRNLGGRLYLVTYGKAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCEEE
LHLDPVEKKPLYHFHPGEGILSVGTVGCNLFCAFCQNWQISQFREFRVSPEGRLDRPIGE
EEECCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC
DWPPKRLVAEAEALGVRLLAYTYNEPAVWIEYAHDTARLAKARGMKNVFVTSGFETKEAW
CCCHHHHHHHHHHHCEEEEEEEECCCEEEEEECCHHHHHHHHCCCCEEEEECCCCHHHHH
DYIRPHLDAANVDLKGFTEKFYREVCGARLKPVLESLGHLVASGVWVEVTTLLLEGYNDS
HHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
DEEVRAMARFLKGLSPDIPWHLTAAHPDYRMLDLRSTRHATLVRAHAIAKEEGLRFVYVG
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
NVLDEERNSTYCPNCGRLLVRRRGYRVEALWEAPGVCPGCGQRIPGVWTW
CHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLAATLREADLFRSLPKGFVQCRACAHYCALPEGGAGKCGVRRNLGGRLYLVTYGKAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEECCEEE
LHLDPVEKKPLYHFHPGEGILSVGTVGCNLFCAFCQNWQISQFREFRVSPEGRLDRPIGE
EEECCCCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC
DWPPKRLVAEAEALGVRLLAYTYNEPAVWIEYAHDTARLAKARGMKNVFVTSGFETKEAW
CCCHHHHHHHHHHHCEEEEEEEECCCEEEEEECCHHHHHHHHCCCCEEEEECCCCHHHHH
DYIRPHLDAANVDLKGFTEKFYREVCGARLKPVLESLGHLVASGVWVEVTTLLLEGYNDS
HHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
DEEVRAMARFLKGLSPDIPWHLTAAHPDYRMLDLRSTRHATLVRAHAIAKEEGLRFVYVG
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC
NVLDEERNSTYCPNCGRLLVRRRGYRVEALWEAPGVCPGCGQRIPGVWTW
CHHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]