| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is gufA [H]
Identifier: 55981675
GI number: 55981675
Start: 1601003
End: 1601749
Strand: Direct
Name: gufA [H]
Synonym: TTHA1706
Alternate gene names: 55981675
Gene position: 1601003-1601749 (Clockwise)
Preceding gene: 55981674
Following gene: 55981679
Centisome position: 86.55
GC content: 70.01
Gene sequence:
>747_bases ATGGAAGGCCTGCCCATCACTCCCTGGACGGTGTTCCTCTACGCCTTCCTCACCGCCGTCGCCACAGGCCTCGGCGCCCT CCCCTTCCTCTTCACCCGCGGGATCACGCGGCGGCACCTCGGCCTCGCCAACGCCGCCGCCGCCGGGCTCATGGTGGCGG CGAGCTTCGGCCTGATCTACGAGGGGGTGAACTACAGCCTGGGGCGGACCCTGGTGGGCGTGGGCCTCGGCCTCCTCTTC ATCCTCCTCGCCCACCGCTACCTCGAGGGCCGGGAGGTGAACCTCGGCGACCTCAAGGGCCTGGACGCCCGCAAGGCCCT GATGATGGTGGGCATCATGACCCTTCACTCCTTCGCCGAAGGGGTGGGGGTGGGGGTGGCCTTCGGGGGCGGGGAGGCCC TCGGGGTCTTCATCTCCTTGGCCATCGCCGTGCACAACATCCCCGAGGGACTCGCCATCAGCCTCGTCCTCGTTCCCCGG GGGGTGAGCGTGCTCGGGGCCGCCTTTTGGAGCGTCTTCTCCAGCCTGCCCCAGCCCCTCATGGCCGTGCCCGCCTACCT CTTCGTGGAAACCTTCCAACCCTTCCTGCCGGTGGGGCTTGGCCTCGCCGCCGGGGCCATGATCTGGATGGCCGCGGCCG AGCTCCTCCCCGACGCCCTGAAGGAGGCCGAGGCCGAGGGGGTGGCCACGGTCCTCACCCTCTCCGTGGCCCTGATGGTG GCCTTCCAGATCCTGATCGGGGGCTAA
Upstream 100 bases:
>100_bases CCACGACCTCCTCCTGGACCGGGACCGGGAGGAGGTGGCCCGGGCGGTGCGCGACTGGCTTCTTGCAAGTGATAACTACT TGCAATAAAATGGGCCCGGT
Downstream 100 bases:
>100_bases GCGCCCGCGGTGGGGTCCTTAGAGCCAGACCCAGGGGAGGGGGGCCTCGAGGCGGAGGGCCTCCAGGCTCGGCCGAACCC TATAGGCCTCCAGGACCACC
Product: divalent heavy-metal cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MEGLPITPWTVFLYAFLTAVATGLGALPFLFTRGITRRHLGLANAAAAGLMVAASFGLIYEGVNYSLGRTLVGVGLGLLF ILLAHRYLEGREVNLGDLKGLDARKALMMVGIMTLHSFAEGVGVGVAFGGGEALGVFISLAIAVHNIPEGLAISLVLVPR GVSVLGAAFWSVFSSLPQPLMAVPAYLFVETFQPFLPVGLGLAAGAMIWMAAAELLPDALKEAEAEGVATVLTLSVALMV AFQILIGG
Sequences:
>Translated_248_residues MEGLPITPWTVFLYAFLTAVATGLGALPFLFTRGITRRHLGLANAAAAGLMVAASFGLIYEGVNYSLGRTLVGVGLGLLF ILLAHRYLEGREVNLGDLKGLDARKALMMVGIMTLHSFAEGVGVGVAFGGGEALGVFISLAIAVHNIPEGLAISLVLVPR GVSVLGAAFWSVFSSLPQPLMAVPAYLFVETFQPFLPVGLGLAAGAMIWMAAAELLPDALKEAEAEGVATVLTLSVALMV AFQILIGG >Mature_248_residues MEGLPITPWTVFLYAFLTAVATGLGALPFLFTRGITRRHLGLANAAAAGLMVAASFGLIYEGVNYSLGRTLVGVGLGLLF ILLAHRYLEGREVNLGDLKGLDARKALMMVGIMTLHSFAEGVGVGVAFGGGEALGVFISLAIAVHNIPEGLAISLVLVPR GVSVLGAAFWSVFSSLPQPLMAVPAYLFVETFQPFLPVGLGLAAGAMIWMAAAELLPDALKEAEAEGVATVLTLSVALMV AFQILIGG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=133, Percent_Identity=33.8345864661654, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI229577422, Length=133, Percent_Identity=33.8345864661654, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17507805, Length=155, Percent_Identity=32.9032258064516, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24652846, Length=137, Percent_Identity=35.036496350365, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 25724; Mature: 25724
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLPITPWTVFLYAFLTAVATGLGALPFLFTRGITRRHLGLANAAAAGLMVAASFGLIY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHH EGVNYSLGRTLVGVGLGLLFILLAHRYLEGREVNLGDLKGLDARKALMMVGIMTLHSFAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVGVGVAFGGGEALGVFISLAIAVHNIPEGLAISLVLVPRGVSVLGAAFWSVFSSLPQPL HHCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHH MAVPAYLFVETFQPFLPVGLGLAAGAMIWMAAAELLPDALKEAEAEGVATVLTLSVALMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AFQILIGG HHHHHHCC >Mature Secondary Structure MEGLPITPWTVFLYAFLTAVATGLGALPFLFTRGITRRHLGLANAAAAGLMVAASFGLIY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHH EGVNYSLGRTLVGVGLGLLFILLAHRYLEGREVNLGDLKGLDARKALMMVGIMTLHSFAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVGVGVAFGGGEALGVFISLAIAVHNIPEGLAISLVLVPRGVSVLGAAFWSVFSSLPQPL HHCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHH MAVPAYLFVETFQPFLPVGLGLAAGAMIWMAAAELLPDALKEAEAEGVATVLTLSVALMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH AFQILIGG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]