| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is cat2 [H]
Identifier: 55981417
GI number: 55981417
Start: 1375749
End: 1377083
Strand: Direct
Name: cat2 [H]
Synonym: TTHA1448
Alternate gene names: 55981417
Gene position: 1375749-1377083 (Clockwise)
Preceding gene: 55981416
Following gene: 55981418
Centisome position: 74.38
GC content: 69.14
Gene sequence:
>1335_bases ATGAGCTACCGCAAGAAGCTCACCTCCCCCGAGGACGCCGTGGGCCTGATCCGCTCGGGGATGCGGGTCTTCGTCTCCGG CAACGCCGCCACCCCCACGCCCCTCCTCAAGGCCCTCGCCGCCCGCAAGGACGAGCTGGAAAACGTGGAGCTCGTCCACC TCCTGCAGATGGGGGAAGACCCCTTCGCCTCTTTGGAGATGGAGGGGCACTTCCGAAGGCGCTCCCTCTTCGTGGGCCCC GCCGACCGGGAGGCGGTGAACCAGGGCCGGGCCGACTACGTGCCCGTCATGCTCCACCAGGTGCCCTGGCTCTTCAAGCG GGGCATCCTCCCCTTGGACGCCGCCATCGTCCAGGTCTCCCCGCCCGACGAGCACGGCTTCTGCTCCTTGGGGGTGGAGG TGATCGCCACGAAGGCCGCGGTGGAGGCCGCCCCCATCGTCATCGCCATGGTGAACCCCAGAATGCCGAGGACCCTGGGG GACACCTTCGTCCACGTCTCCCGCTTCACCGCCATCGTGGAGGTGGACTGGCCCCTGCCCGAGCTCAAGCGGGAGGGGTT TGGCGAGGTGGAGCGGAGGATCGGGGAGCACGTGGCGGGCCTCATTGAGGACGGGGCCACCCTGCAGATGGGCATCGGGG CCATCCCCGACGCGGTCTTGGCGAGCCTGGAGGGCCGGAGGGACCTCGGGGTCCACACGGAGATGATCTCGGACGGGGTC CTCGAGGCCTGGGAAAAGGGCCTCATCACCGGGGCGAAAAAGTCCCTCCACCCCGGGAAGATCGTGGGCACCTTCGTCCT GGGCTCGGAGAGGCTCTACCGCTTCGTCCACGACAACCCCCTCTTTGAGCTCCACCCCGCCGACTACGTGAACGACCCCT TCGTCATCGCCCAAAACCGCAAGATGGTGGCCATCAACTCGGCCATTGAGGTGGACCTCACGGGCCAGGTGGTGGCGGAC TCCATCGGCACCCGGATCTACTCCGGCTTCGGCGGCCAGCTGGACTTCATCCGGGGGGCGGCGCGGAGCGAGGGGGGGAA GCCCATCATCGCCCTGCCCTCCACCGCCAAGGGCCAAAGCCGCATCGTCCCCTTCCTCAAGCCGGGCGCGGGGGTGGTCA CCACCCGGGCCGACGTGCACTACGTGGTCACCGAGTGGGGCGTGGCCGAGCTCTTCGGCCGCTCCCTAAGGGAAAGGGCC AAAGCCCTCATCGCCATCGCCCACCCGGACTTCCGCGAGGCCCTCCTCCAGGGCGCCTGGGAGCGGGGCCTCCTCCCCCG GGGCTACCCCGGCGTGGACCTGAAGGGGCTGGAGGAAAAGCGCGGGAGGCCGTAA
Upstream 100 bases:
>100_bases TCCTCCCCTACCTGCTCCGGATCCAGGAAGACCCCCTGGCCCTTCCCGGGCTCCGCCAGGGGGCCTACCTCCTCTTCGGC GAGAAAGGAGGCCACCTAGA
Downstream 100 bases:
>100_bases TCCCACCCCATGCTGGCCCAAGCCAGCATGGGGGCCCCGGCAAAAGGTCCCTGGGAAGCCTCCCTGGGCCAGTCGGACGA AGGAACCCGGAAGGGTATAA
Product: 4-hydroxybutyrate CoA-transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSYRKKLTSPEDAVGLIRSGMRVFVSGNAATPTPLLKALAARKDELENVELVHLLQMGEDPFASLEMEGHFRRRSLFVGP ADREAVNQGRADYVPVMLHQVPWLFKRGILPLDAAIVQVSPPDEHGFCSLGVEVIATKAAVEAAPIVIAMVNPRMPRTLG DTFVHVSRFTAIVEVDWPLPELKREGFGEVERRIGEHVAGLIEDGATLQMGIGAIPDAVLASLEGRRDLGVHTEMISDGV LEAWEKGLITGAKKSLHPGKIVGTFVLGSERLYRFVHDNPLFELHPADYVNDPFVIAQNRKMVAINSAIEVDLTGQVVAD SIGTRIYSGFGGQLDFIRGAARSEGGKPIIALPSTAKGQSRIVPFLKPGAGVVTTRADVHYVVTEWGVAELFGRSLRERA KALIAIAHPDFREALLQGAWERGLLPRGYPGVDLKGLEEKRGRP
Sequences:
>Translated_444_residues MSYRKKLTSPEDAVGLIRSGMRVFVSGNAATPTPLLKALAARKDELENVELVHLLQMGEDPFASLEMEGHFRRRSLFVGP ADREAVNQGRADYVPVMLHQVPWLFKRGILPLDAAIVQVSPPDEHGFCSLGVEVIATKAAVEAAPIVIAMVNPRMPRTLG DTFVHVSRFTAIVEVDWPLPELKREGFGEVERRIGEHVAGLIEDGATLQMGIGAIPDAVLASLEGRRDLGVHTEMISDGV LEAWEKGLITGAKKSLHPGKIVGTFVLGSERLYRFVHDNPLFELHPADYVNDPFVIAQNRKMVAINSAIEVDLTGQVVAD SIGTRIYSGFGGQLDFIRGAARSEGGKPIIALPSTAKGQSRIVPFLKPGAGVVTTRADVHYVVTEWGVAELFGRSLRERA KALIAIAHPDFREALLQGAWERGLLPRGYPGVDLKGLEEKRGRP >Mature_443_residues SYRKKLTSPEDAVGLIRSGMRVFVSGNAATPTPLLKALAARKDELENVELVHLLQMGEDPFASLEMEGHFRRRSLFVGPA DREAVNQGRADYVPVMLHQVPWLFKRGILPLDAAIVQVSPPDEHGFCSLGVEVIATKAAVEAAPIVIAMVNPRMPRTLGD TFVHVSRFTAIVEVDWPLPELKREGFGEVERRIGEHVAGLIEDGATLQMGIGAIPDAVLASLEGRRDLGVHTEMISDGVL EAWEKGLITGAKKSLHPGKIVGTFVLGSERLYRFVHDNPLFELHPADYVNDPFVIAQNRKMVAINSAIEVDLTGQVVADS IGTRIYSGFGGQLDFIRGAARSEGGKPIIALPSTAKGQSRIVPFLKPGAGVVTTRADVHYVVTEWGVAELFGRSLRERAK ALIAIAHPDFREALLQGAWERGLLPRGYPGVDLKGLEEKRGRP
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI32563853, Length=427, Percent_Identity=51.9906323185012, Blast_Score=423, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17538151, Length=427, Percent_Identity=47.7751756440281, Blast_Score=403, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6319456, Length=490, Percent_Identity=25.9183673469388, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358615, Length=424, Percent_Identity=51.1792452830189, Blast_Score=436, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 48351; Mature: 48220
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRKKLTSPEDAVGLIRSGMRVFVSGNAATPTPLLKALAARKDELENVELVHLLQMGED CCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC PFASLEMEGHFRRRSLFVGPADREAVNQGRADYVPVMLHQVPWLFKRGILPLDAAIVQVS CCCEEEECCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC PPDEHGFCSLGVEVIATKAAVEAAPIVIAMVNPRMPRTLGDTFVHVSRFTAIVEVDWPLP CCCCCCCHHHCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHEEEHEEEEEEECCCCH ELKREGFGEVERRIGEHVAGLIEDGATLQMGIGAIPDAVLASLEGRRDLGVHTEMISDGV HHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHH LEAWEKGLITGAKKSLHPGKIVGTFVLGSERLYRFVHDNPLFELHPADYVNDPFVIAQNR HHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCEEECCCCCCCCCEEEECCC KMVAINSAIEVDLTGQVVADSIGTRIYSGFGGQLDFIRGAARSEGGKPIIALPSTAKGQS EEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC RIVPFLKPGAGVVTTRADVHYVVTEWGVAELFGRSLRERAKALIAIAHPDFREALLQGAW CCCCEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH ERGLLPRGYPGVDLKGLEEKRGRP HHCCCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure SYRKKLTSPEDAVGLIRSGMRVFVSGNAATPTPLLKALAARKDELENVELVHLLQMGED CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCC PFASLEMEGHFRRRSLFVGPADREAVNQGRADYVPVMLHQVPWLFKRGILPLDAAIVQVS CCCEEEECCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEC PPDEHGFCSLGVEVIATKAAVEAAPIVIAMVNPRMPRTLGDTFVHVSRFTAIVEVDWPLP CCCCCCCHHHCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHEEEHEEEEEEECCCCH ELKREGFGEVERRIGEHVAGLIEDGATLQMGIGAIPDAVLASLEGRRDLGVHTEMISDGV HHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHH LEAWEKGLITGAKKSLHPGKIVGTFVLGSERLYRFVHDNPLFELHPADYVNDPFVIAQNR HHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCEEECCCCCCCCCEEEECCC KMVAINSAIEVDLTGQVVADSIGTRIYSGFGGQLDFIRGAARSEGGKPIIALPSTAKGQS EEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC RIVPFLKPGAGVVTTRADVHYVVTEWGVAELFGRSLRERAKALIAIAHPDFREALLQGAW CCCCEECCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH ERGLLPRGYPGVDLKGLEEKRGRP HHCCCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]