| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is ushA [C]
Identifier: 55981386
GI number: 55981386
Start: 1347275
End: 1348996
Strand: Reverse
Name: ushA [C]
Synonym: TTHA1417
Alternate gene names: 55981386
Gene position: 1348996-1347275 (Counterclockwise)
Preceding gene: 55981387
Following gene: 55981385
Centisome position: 72.93
GC content: 69.16
Gene sequence:
>1722_bases ATGAACCGCAGGGAGCTCCTTCAGCTTCTTTCCGCTTTGGCGGTCCTGGGGCCTAGGGGGTGGGCCCGGGCCCTGGAGGA CCCCAGGTCCCTTTACGACCTCCCCCCCTACGGGGACGCCACCCTCCTCTACTTCTCCGACCTCCACGGCCAAGCCTTCC CCCACTACTTCATGGAGCCCCCGAACCTCATCGCCCCCAAGCCCCTCATGGGCCGCCCGGGCTACCTCACGGGGGAGGCC ATCCTCCGCTACTACGGCGTGGAGCGGGGCACGCCCCTCGCCTACCTCCTCTCCTACGTGGACTTCGTGGAGCTCGCCCG GACCTTCGGGCCCATAGGGGGGATGGGCGCCCTCACCGCCCTCATCCGCGACCAGAAGGCCCGGGTGGAGGCCGAGGGGG GTAAGGCCTTGGTCCTGGACGGCGGGGACACCTGGACCAACTCCGGGCTTTCCCTCCTCACCCGGGGCGAGGCCGTGGTG CGGTGGCAGAACCTCGTGGGGGTGGACCACATGGTCTCCCACTGGGAGTGGACCCTGGGGCGGGAGCGGGTGGAGGAGCT CCTTGGGCTCTTCCGGGGAGAGTTCCTCTCCTACAACATCGTGGACGACCTCTTCGGCGACCCCCTCTTCCCCGCCTACC GGATCCACCGGGTGGGGCCCTACGCCCTGGCGGTGGTGGGGGCGAGCTACCCCTACGTCAAGGTTTCCCACCCCGAATCC TTTACCGAGGGGCTCTCCTTCGCCCTGGACGAGAGGAGGCTGCAGGAGGCGGTGGACAAGGCCCGCGCCGAGGGGGCGAA CGCCGTGGTCCTCCTCTCCCACAACGGGATGCAGCTGGACGCCGCCTTGGCGGAGCGGATCCGGGGGATTGACCTCATCC TCTCCGGCCACACCCACGACCTCACCCCCAGGCCCTGGCGGGTGGGGAAGACCTGGATCGTGGCGGGGAGCGCCGCCGGG AAGGCCCTGATGCGGGTGGACCTGAAGCTTTGGAAGGGGGGCATCGCCAACCTCCGGGTGCGGGTGCTCCCCGTTCTCGC GGAGCACCTGCCCAAGGCCGAGGACGTGGAGGCCTTCCTCAAGGCCCAGCTCGCTCCCCACCAGGACCACCTCTTCACCC CCTTGGCGGTCTCCGAGACCCTCCTCTACAAGCGGGACACCCTGTACTCCACCTGGGACCAGCTTGTGGGGGAGGCGGTG AAGGCCATTTACCCCGAGGTGGAGGTGGTCTTCAGCCCGGCGGTGCGCTGGGGGACCACCATCCTCCCGGGGCAGGCCAT CACCTGGGACCACCTCTACGCCTACACCGGCTTCACCTACCCCGAGCTCTACCTCTTCTACCTCCGGGGAGCGCAGATCA AGGCGGTCCTGGAGGACATCGCAAGCAACGTCTTCACCCCGGACCCCTTCTACCAGCAGGGCGGGGACGTGAGCCGGGTC TTTGGCCTCCGCTACGTCCTGGACCCCGATGCCCCCACCGGGGAAAGGATCCGGGAGGTGGAGGTGGGGGGCAGGCCCTT GGACCCGAACCGCCGCTACTTGGCCGCCGCCTACGGGGGGAGGCTGCAGCGGGTGGGGGAGGCCAAGCCGGGGTACGAGC CCAAGCCCATCTACGAGGTTCTCGCCGAGTACTTGCGGTCCGTGGGCCGGGTGCGCGTCCGGCCCGAGCCCAACGTCAAG GTCATCGGGCGCAACTACCGCATGCCGGAGGTGACGGGATGA
Upstream 100 bases:
>100_bases GGGCCCAGGGCCTTCTCACCCCCGAGGAGATCGCCGACGTGGTGGCCTACCTCCTGGACCCCGAGAGCGACTTCAACACC AAGCCGGCGGTGGGGTCCAA
Downstream 100 bases:
>100_bases AGCGAAAGGCGTTTCTGGCCTTGGGGTTTTTGGCCTTAGGCCTCGGGCTTTCCCAGGTGGGGCCGTTTAGGGCCCGCCTC GAGGCCGCCATCCAGACGGG
Product: sulfur oxidation protein SoxB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEA ILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVV RWQNLVGVDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPES FTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAG KALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAV KAIYPEVEVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTPDPFYQQGGDVSRV FGLRYVLDPDAPTGERIREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPKPIYEVLAEYLRSVGRVRVRPEPNVK VIGRNYRMPEVTG
Sequences:
>Translated_573_residues MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEA ILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVV RWQNLVGVDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPES FTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAG KALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAV KAIYPEVEVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTPDPFYQQGGDVSRV FGLRYVLDPDAPTGERIREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPKPIYEVLAEYLRSVGRVRVRPEPNVK VIGRNYRMPEVTG >Mature_573_residues MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEA ILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVV RWQNLVGVDHMVSHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPES FTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAG KALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAV KAIYPEVEVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTPDPFYQQGGDVSRV FGLRYVLDPDAPTGERIREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPKPIYEVLAEYLRSVGRVRVRPEPNVK VIGRNYRMPEVTG
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 63905; Mature: 63905
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEP CCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCC PNLIAPKPLMGRPGYLTGEAILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMVSHWEWTLG HHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHH RERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPES HHHHHHHHHHHHHHHEEEECHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCEEEECCCHH FTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHCCEEEEEECCCCC LTPRPWRVGKTWIVAGSAAGKALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFL CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHH KAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAVKAIYPEVEVVFSPAVRWGTT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCE ILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTPDPFYQQGGDVSRV ECCCCCEEHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHH FGLRYVLDPDAPTGERIREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPKPIYEV HCEEEEECCCCCCCHHEEEEECCCCCCCCCCCEEEEHHCCHHHHHCCCCCCCCCCHHHHH LAEYLRSVGRVRVRPEPNVKVIGRNYRMPEVTG HHHHHHHHCCEEECCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MNRRELLQLLSALAVLGPRGWARALEDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEP CCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCC PNLIAPKPLMGRPGYLTGEAILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMVSHWEWTLG HHHHHHHEEEECCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHCHHHHHHHHHHHHH RERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPES HHHHHHHHHHHHHHHEEEECHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCEEEECCCHH FTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHD HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHCCEEEEEECCCCC LTPRPWRVGKTWIVAGSAAGKALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFL CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHH KAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAVKAIYPEVEVVFSPAVRWGTT HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCE ILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTPDPFYQQGGDVSRV ECCCCCEEHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHH FGLRYVLDPDAPTGERIREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPKPIYEV HCEEEEECCCCCCCHHEEEEECCCCCCCCCCCEEEEHHCCHHHHHCCCCCCCCCCHHHHH LAEYLRSVGRVRVRPEPNVKVIGRNYRMPEVTG HHHHHHHHCCEEECCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]