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The map label for this gene is 55981385

Identifier: 55981385

GI number: 55981385

Start: 1346718

End: 1347278

Strand: Reverse

Name: 55981385

Synonym: TTHA1416

Alternate gene names: NA

Gene position: 1347278-1346718 (Counterclockwise)

Preceding gene: 55981386

Following gene: 55981384

Centisome position: 72.84

GC content: 66.67

Gene sequence:

>561_bases
ATGAAGCGAAAGGCGTTTCTGGCCTTGGGGTTTTTGGCCTTAGGCCTCGGGCTTTCCCAGGTGGGGCCGTTTAGGGCCCG
CCTCGAGGCCGCCATCCAGACGGGGGGCGAGGCCTTCGCCCAGGTGATGCTCTCCCAGGACAAGGCCCAGGCCCTCTGTA
CGCAGTACCGGGACAAGCTTCCCCCCGAACTTGTCCCGGCCTTCCTCGCGGAGCAAAGGGCCCTCATCAAGTACCCCGCC
TCGGGGAAGCTCATGGGCGACTGGAAGAACGGGGAGAAGGTCTTCACCGACCCCAAGCGGGGCAACTGCTACGCCTGCCA
CCAAGGGGACCCCCGGGAGGTCGCCTACGGGACCATGGGGCCGAGCCTCACGGGCTACGGCCAGCGCGGCCTGTCGGAGG
CGGTGGTGCGCTACACCTACGAGAAGATCTACAACGCCTGGGCCTTTGTCCCCTGCTCCCTCATGTACCGGGGCGGGGTG
CACGGGTACTTCACCCCCGAGGAGACGGCCGACCTGGTGGCCTACCTCCTCTCCCCTGAGTCCCCCATTAACCGGAGGTG
A

Upstream 100 bases:

>100_bases
TTCTCGCCGAGTACTTGCGGTCCGTGGGCCGGGTGCGCGTCCGGCCCGAGCCCAACGTCAAGGTCATCGGGCGCAACTAC
CGCATGCCGGAGGTGACGGG

Downstream 100 bases:

>100_bases
GCCGTGAGCGTGCGGAAGAAGCGTCTGATCTTGCTGGCCGGGGTGGCCCTGGGGGCGCTTGGGGGGCTTGTGGCCTACAC
GCAGCAAAGCAAGCCCCTGG

Product: cytochrome C SoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKRKAFLALGFLALGLGLSQVGPFRARLEAAIQTGGEAFAQVMLSQDKAQALCTQYRDKLPPELVPAFLAEQRALIKYPA
SGKLMGDWKNGEKVFTDPKRGNCYACHQGDPREVAYGTMGPSLTGYGQRGLSEAVVRYTYEKIYNAWAFVPCSLMYRGGV
HGYFTPEETADLVAYLLSPESPINRR

Sequences:

>Translated_186_residues
MKRKAFLALGFLALGLGLSQVGPFRARLEAAIQTGGEAFAQVMLSQDKAQALCTQYRDKLPPELVPAFLAEQRALIKYPA
SGKLMGDWKNGEKVFTDPKRGNCYACHQGDPREVAYGTMGPSLTGYGQRGLSEAVVRYTYEKIYNAWAFVPCSLMYRGGV
HGYFTPEETADLVAYLLSPESPINRR
>Mature_186_residues
MKRKAFLALGFLALGLGLSQVGPFRARLEAAIQTGGEAFAQVMLSQDKAQALCTQYRDKLPPELVPAFLAEQRALIKYPA
SGKLMGDWKNGEKVFTDPKRGNCYACHQGDPREVAYGTMGPSLTGYGQRGLSEAVVRYTYEKIYNAWAFVPCSLMYRGGV
HGYFTPEETADLVAYLLSPESPINRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20537; Mature: 20537

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKAFLALGFLALGLGLSQVGPFRARLEAAIQTGGEAFAQVMLSQDKAQALCTQYRDKL
CCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PPELVPAFLAEQRALIKYPASGKLMGDWKNGEKVFTDPKRGNCYACHQGDPREVAYGTMG
CHHHHHHHHHHCHHHEECCCCCCEEECCCCCCEEECCCCCCCEEEECCCCCCCEEECCCC
PSLTGYGQRGLSEAVVRYTYEKIYNAWAFVPCSLMYRGGVHGYFTPEETADLVAYLLSPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SPINRR
CCCCCC
>Mature Secondary Structure
MKRKAFLALGFLALGLGLSQVGPFRARLEAAIQTGGEAFAQVMLSQDKAQALCTQYRDKL
CCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
PPELVPAFLAEQRALIKYPASGKLMGDWKNGEKVFTDPKRGNCYACHQGDPREVAYGTMG
CHHHHHHHHHHCHHHEECCCCCCEEECCCCCCEEECCCCCCCEEEECCCCCCCEEECCCC
PSLTGYGQRGLSEAVVRYTYEKIYNAWAFVPCSLMYRGGVHGYFTPEETADLVAYLLSPE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SPINRR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]