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The map label for this gene is 55981387

Identifier: 55981387

GI number: 55981387

Start: 1348993

End: 1349565

Strand: Reverse

Name: 55981387

Synonym: TTHA1418

Alternate gene names: NA

Gene position: 1349565-1348993 (Counterclockwise)

Preceding gene: 55981388

Following gene: 55981386

Centisome position: 72.96

GC content: 64.92

Gene sequence:

>573_bases
ATGCGGAAGGTTCTCGTAGCCCTTTTTGTCCTGGCCTTGGCCTTCGCCCTGGCCCAGCGCTACTTCACCGAGGAGGAGCT
TAAGCGGATTGAGACCGGAGGCAAGGCCTACGCCGAGGTTTTCGTGGGCCAAAGGCCCGACCAGGCCCTCTGCTCCATCC
ACCGGAACCGCCTCCCCGCCGACCTCCTCCCCAAGTTCCTGGAAGAGCAGCGCGTCCTGATCAAGTACCCCGCTTCCGGG
AAGCTCATGGGGGACTGGAGGAAGGGCGGGGCCATCTTCAACGACCTGCGGAAGGCCAACTGCTTCTCCTGCCACTTTGG
CTCCCCCGAACACCTGGGGGGCGACGTGGGCCCGAGCCTGGAGAAGTACGGCCTCAAGCGGGGCCAGTCGGAGGCGGTGC
AGCGCTACACCTACGAGGTGATCTACAACTCCTGGGCCTACTTCCCCTGCACCGTCATGTACCGCTTCGGGGCCCAGGGC
CTTCTCACCCCCGAGGAGATCGCCGACGTGGTGGCCTACCTCCTGGACCCCGAGAGCGACTTCAACACCAAGCCGGCGGT
GGGGTCCAAATGA

Upstream 100 bases:

>100_bases
TTACTCCCAGCCCATCCTCGCCCTGGAGCTCTACCTGGCCTACCACGCAAACGGGGCCGTGGTGGAGGAGTGGCCCGCCT
TCGTGCGGTGAGGAGGGAGC

Downstream 100 bases:

>100_bases
ACCGCAGGGAGCTCCTTCAGCTTCTTTCCGCTTTGGCGGTCCTGGGGCCTAGGGGGTGGGCCCGGGCCCTGGAGGACCCC
AGGTCCCTTTACGACCTCCC

Product: cytochrome C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRKVLVALFVLALAFALAQRYFTEEELKRIETGGKAYAEVFVGQRPDQALCSIHRNRLPADLLPKFLEEQRVLIKYPASG
KLMGDWRKGGAIFNDLRKANCFSCHFGSPEHLGGDVGPSLEKYGLKRGQSEAVQRYTYEVIYNSWAYFPCTVMYRFGAQG
LLTPEEIADVVAYLLDPESDFNTKPAVGSK

Sequences:

>Translated_190_residues
MRKVLVALFVLALAFALAQRYFTEEELKRIETGGKAYAEVFVGQRPDQALCSIHRNRLPADLLPKFLEEQRVLIKYPASG
KLMGDWRKGGAIFNDLRKANCFSCHFGSPEHLGGDVGPSLEKYGLKRGQSEAVQRYTYEVIYNSWAYFPCTVMYRFGAQG
LLTPEEIADVVAYLLDPESDFNTKPAVGSK
>Mature_190_residues
MRKVLVALFVLALAFALAQRYFTEEELKRIETGGKAYAEVFVGQRPDQALCSIHRNRLPADLLPKFLEEQRVLIKYPASG
KLMGDWRKGGAIFNDLRKANCFSCHFGSPEHLGGDVGPSLEKYGLKRGQSEAVQRYTYEVIYNSWAYFPCTVMYRFGAQG
LLTPEEIADVVAYLLDPESDFNTKPAVGSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21365; Mature: 21365

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLVALFVLALAFALAQRYFTEEELKRIETGGKAYAEVFVGQRPDQALCSIHRNRLPA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCH
DLLPKFLEEQRVLIKYPASGKLMGDWRKGGAIFNDLRKANCFSCHFGSPEHLGGDVGPSL
HHHHHHHHCCCEEEECCCCCCEECCHHCCCHHHHHHHHCCCEEECCCCHHHCCCCCCCCH
EKYGLKRGQSEAVQRYTYEVIYNSWAYFPCTVMYRFGAQGLLTPEEIADVVAYLLDPESD
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
FNTKPAVGSK
CCCCCCCCCC
>Mature Secondary Structure
MRKVLVALFVLALAFALAQRYFTEEELKRIETGGKAYAEVFVGQRPDQALCSIHRNRLPA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCH
DLLPKFLEEQRVLIKYPASGKLMGDWRKGGAIFNDLRKANCFSCHFGSPEHLGGDVGPSL
HHHHHHHHCCCEEEECCCCCCEECCHHCCCHHHHHHHHCCCEEECCCCHHHCCCCCCCCH
EKYGLKRGQSEAVQRYTYEVIYNSWAYFPCTVMYRFGAQGLLTPEEIADVVAYLLDPESD
HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
FNTKPAVGSK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]