| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yxlF [H]
Identifier: 55981377
GI number: 55981377
Start: 1340117
End: 1340686
Strand: Reverse
Name: yxlF [H]
Synonym: TTHA1408
Alternate gene names: 55981377
Gene position: 1340686-1340117 (Counterclockwise)
Preceding gene: 55981378
Following gene: 55981376
Centisome position: 72.48
GC content: 71.58
Gene sequence:
>570_bases ATGCTCTTGCGCCTCGAGGCCGTTTCCAAGCGCTTTGGCCGCGACTGGGTCCTCCGCGATCTGAGCCTTGCCCTAAAGCG GGGAGAGGTGGTGGCCCTCTTGGGCCCGAACGGCTCGGGCAAGACCACCCTCCTCCGCCTCATGGCGGGGCTTATAAGGC CCACCCGGGGCCGGGTGGAGCGAAGGGGAAGGCCCCTCTTCCTCCCCAACCCCCCGGCCTTCCACCGCCACCTCACCGCC CGGGAGCACCTCCTCTTTGACCTGGGTTTCCACGGGGCGCAAGGGGACTGGGAGGCGGCCTTGGCCCGCTTCGCCCTTCC CCCGGACCTTCCCCTCGCCGCCTTCTCCAGCGGGATGAAGAAGCGCCTCGCCCTCGCCCGCCTCCTCCTCCTGAGGCCCG ACCTCTGGCTTTTGGACGAGCCGGAGACGGCCTTGGACCAGGAGGGGCGGAGGCTCCTTCTGGAGGTCTTGGAGGAGGCC CGGAAGGGCGCCGGGGTGGTCCTCGCCACCCACGACCGGGCCCTGGCCGAGGCGGTGGCCGACCGGGCGGTGTGGCTGGG GGCGGCGTGA
Upstream 100 bases:
>100_bases ACGGCCCTCAACACCTTCTTCCTGCGGATCACCCCCGAGTGGCTCCAGAGGTACCTCTAGGACCTTTGTCCCCGGAGGCT TCGCCTAGACTGGTGAAGGC
Downstream 100 bases:
>100_bases GGCGGGTCTGGCTTTTGGCCCTTAGGGACCTCCGCCTCGAGGTCCGGGACCGCCTCGGGGTCCTCTCGGCCCTGGCCTTT CTCTTCGTCAACCTCTTCGT
Product: ABC transporter ATP-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLLRLEAVSKRFGRDWVLRDLSLALKRGEVVALLGPNGSGKTTLLRLMAGLIRPTRGRVERRGRPLFLPNPPAFHRHLTA REHLLFDLGFHGAQGDWEAALARFALPPDLPLAAFSSGMKKRLALARLLLLRPDLWLLDEPETALDQEGRRLLLEVLEEA RKGAGVVLATHDRALAEAVADRAVWLGAA
Sequences:
>Translated_189_residues MLLRLEAVSKRFGRDWVLRDLSLALKRGEVVALLGPNGSGKTTLLRLMAGLIRPTRGRVERRGRPLFLPNPPAFHRHLTA REHLLFDLGFHGAQGDWEAALARFALPPDLPLAAFSSGMKKRLALARLLLLRPDLWLLDEPETALDQEGRRLLLEVLEEA RKGAGVVLATHDRALAEAVADRAVWLGAA >Mature_189_residues MLLRLEAVSKRFGRDWVLRDLSLALKRGEVVALLGPNGSGKTTLLRLMAGLIRPTRGRVERRGRPLFLPNPPAFHRHLTA REHLLFDLGFHGAQGDWEAALARFALPPDLPLAAFSSGMKKRLALARLLLLRPDLWLLDEPETALDQEGRRLLLEVLEEA RKGAGVVLATHDRALAEAVADRAVWLGAA
Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27477115, Length=181, Percent_Identity=34.8066298342541, Blast_Score=98, Evalue=3e-21, Organism=Homo sapiens, GI27436953, Length=179, Percent_Identity=34.0782122905028, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI6005701, Length=203, Percent_Identity=32.512315270936, Blast_Score=95, Evalue=3e-20, Organism=Homo sapiens, GI153792144, Length=189, Percent_Identity=32.2751322751323, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=29.1866028708134, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI45446740, Length=194, Percent_Identity=30.9278350515464, Blast_Score=84, Evalue=7e-17, Organism=Homo sapiens, GI47078218, Length=194, Percent_Identity=30.9278350515464, Blast_Score=84, Evalue=8e-17, Organism=Homo sapiens, GI27881501, Length=186, Percent_Identity=29.5698924731183, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI30795238, Length=186, Percent_Identity=29.5698924731183, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI105990541, Length=190, Percent_Identity=30.5263157894737, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI21536376, Length=192, Percent_Identity=27.6041666666667, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI116734710, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI4557481, Length=186, Percent_Identity=29.5698924731183, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI150417984, Length=182, Percent_Identity=33.5164835164835, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI157502203, Length=152, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI157502201, Length=152, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI148612853, Length=192, Percent_Identity=27.6041666666667, Blast_Score=68, Evalue=6e-12, Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=36.6197183098592, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=36.5979381443299, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1787029, Length=212, Percent_Identity=33.9622641509434, Blast_Score=100, Evalue=5e-23, Organism=Escherichia coli, GI87081709, Length=206, Percent_Identity=31.5533980582524, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=38.3838383838384, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1790467, Length=207, Percent_Identity=31.8840579710145, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI87081782, Length=195, Percent_Identity=31.2820512820513, Blast_Score=84, Evalue=4e-18, Organism=Escherichia coli, GI87082064, Length=169, Percent_Identity=40.2366863905325, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786698, Length=192, Percent_Identity=29.6875, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=29.5566502463054, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1787089, Length=215, Percent_Identity=28.8372093023256, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786319, Length=200, Percent_Identity=30.5, Blast_Score=77, Evalue=5e-16, Organism=Escherichia coli, GI1789751, Length=196, Percent_Identity=34.1836734693878, Blast_Score=74, Evalue=5e-15, Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=28.0373831775701, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=29.7169811320755, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=30, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787041, Length=190, Percent_Identity=28.4210526315789, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1789873, Length=197, Percent_Identity=31.9796954314721, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI1786253, Length=187, Percent_Identity=32.620320855615, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994943, Length=195, Percent_Identity=24.6153846153846, Blast_Score=68, Evalue=3e-13, Organism=Escherichia coli, GI87082268, Length=208, Percent_Identity=27.4038461538462, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=27.8350515463918, Blast_Score=64, Evalue=4e-12, Organism=Escherichia coli, GI1787792, Length=199, Percent_Identity=28.643216080402, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1788540, Length=168, Percent_Identity=32.7380952380952, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983510, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71983516, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71983523, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI193202349, Length=179, Percent_Identity=31.2849162011173, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533608, Length=188, Percent_Identity=28.7234042553192, Blast_Score=73, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17543740, Length=184, Percent_Identity=27.7173913043478, Blast_Score=73, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17555318, Length=205, Percent_Identity=27.8048780487805, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17553372, Length=195, Percent_Identity=34.3589743589744, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17559834, Length=182, Percent_Identity=32.4175824175824, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25146777, Length=182, Percent_Identity=28.021978021978, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212646699, Length=182, Percent_Identity=27.4725274725275, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17569145, Length=184, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71996809, Length=192, Percent_Identity=28.6458333333333, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193211017, Length=182, Percent_Identity=28.021978021978, Blast_Score=66, Evalue=9e-12, Organism=Caenorhabditis elegans, GI193211015, Length=182, Percent_Identity=28.021978021978, Blast_Score=66, Evalue=9e-12, Organism=Caenorhabditis elegans, GI32566680, Length=152, Percent_Identity=29.6052631578947, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71992070, Length=174, Percent_Identity=29.8850574712644, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI25146765, Length=174, Percent_Identity=29.8850574712644, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI86564969, Length=174, Percent_Identity=29.8850574712644, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71992066, Length=174, Percent_Identity=29.8850574712644, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=194, Percent_Identity=31.4432989690722, Blast_Score=75, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6321720, Length=182, Percent_Identity=29.6703296703297, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24666092, Length=201, Percent_Identity=33.8308457711443, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI28573571, Length=205, Percent_Identity=30.2439024390244, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI28573573, Length=192, Percent_Identity=31.25, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28574259, Length=192, Percent_Identity=31.25, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI221512771, Length=200, Percent_Identity=26.5, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI116007184, Length=201, Percent_Identity=30.3482587064677, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI221500419, Length=204, Percent_Identity=30.3921568627451, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24643674, Length=199, Percent_Identity=28.1407035175879, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24648314, Length=199, Percent_Identity=27.6381909547739, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574150, Length=185, Percent_Identity=31.3513513513514, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI116007328, Length=185, Percent_Identity=31.3513513513514, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24648279, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI161078426, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641342, Length=154, Percent_Identity=35.0649350649351, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI45550390, Length=171, Percent_Identity=29.8245614035088, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281361582, Length=174, Percent_Identity=28.735632183908, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI45552437, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585557, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552335, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552341, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552339, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552337, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552345, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552359, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552355, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552351, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550972, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552363, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552361, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552357, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552347, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583969, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552353, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552343, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552349, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161077321, Length=176, Percent_Identity=29.5454545454545, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: 3.6.3.25 [C]
Molecular weight: Translated: 20921; Mature: 20921
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRLEAVSKRFGRDWVLRDLSLALKRGEVVALLGPNGSGKTTLLRLMAGLIRPTRGRVE CEEEHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH RRGRPLFLPNPPAFHRHLTAREHLLFDLGFHGAQGDWEAALARFALPPDLPLAAFSSGMK HCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH KRLALARLLLLRPDLWLLDEPETALDQEGRRLLLEVLEEARKGAGVVLATHDRALAEAVA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH DRAVWLGAA HHHHHCCCC >Mature Secondary Structure MLLRLEAVSKRFGRDWVLRDLSLALKRGEVVALLGPNGSGKTTLLRLMAGLIRPTRGRVE CEEEHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH RRGRPLFLPNPPAFHRHLTAREHLLFDLGFHGAQGDWEAALARFALPPDLPLAAFSSGMK HCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH KRLALARLLLLRPDLWLLDEPETALDQEGRRLLLEVLEEARKGAGVVLATHDRALAEAVA HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH DRAVWLGAA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]