Click here to switch to the map view.

The map label for this gene is 55981376

Identifier: 55981376

GI number: 55981376

Start: 1339455

End: 1340120

Strand: Reverse

Name: 55981376

Synonym: TTHA1407

Alternate gene names: NA

Gene position: 1340120-1339455 (Counterclockwise)

Preceding gene: 55981377

Following gene: 55981375

Centisome position: 72.45

GC content: 69.97

Gene sequence:

>666_bases
GTGAGGCGGGTCTGGCTTTTGGCCCTTAGGGACCTCCGCCTCGAGGTCCGGGACCGCCTCGGGGTCCTCTCGGCCCTGGC
CTTTCTCTTCGTCAACCTCTTCGTCATGGCCCTGGCCCTGGGCCCGGAGGAGGGGGCGCTCCGCCGGGCGGCCCCCGGGG
TCCTTTGGGTGGCCCTGGCCTTCCTCTCCACCCTCCTCGCCACCCGGGCCTTCGGCCGGGAGACGGAGGAGGGGACGCTG
GACGACCTCCTTCTCGTTCCCGGGAGCAAGGAGTGGGTCTACTTCGGCAAGCTCCTCTTTCAGCTCCTCGTCCTTTTGCC
CTTGGCCCTCCTCGCCCTCTTTGGGGCCGCGGGGTTCTTCCACGTGCCCTTGGAACGCGGGGGGGCCCTCTTCCTCACCC
TCGCCCTGGGAAGCCTGGGCTACGCCAGCGTGGCCACCTTCTACGCCGGGCTTTTGAGCCGCCTGAGGGGGCGGGAGGTC
CTCCTTCCCCTTCTCCTCTTCTCCCTGGTGGTCCCCGTGGTCCTGGCCTCGGTGCGGGCCACGGCGGGGGTCGCCGAGGG
GCTTCCCTTGGGGGAGGTGGCCCCTTGGTGGCAGCTGCTCCTCGTCTTTGACCTGGTCTACGTCACCGCGAGCGCCCTCC
TCTTCCCCCTGGTCATGGAGGGGTAG

Upstream 100 bases:

>100_bases
TCTTGGAGGAGGCCCGGAAGGGCGCCGGGGTGGTCCTCGCCACCCACGACCGGGCCCTGGCCGAGGCGGTGGCCGACCGG
GCGGTGTGGCTGGGGGCGGC

Downstream 100 bases:

>100_bases
GGGGGTTTACAGAAACTTCACTTTCCCTTGGCTATCCTAGGTGCTGAAGGAGGTTTGACCGATGCAGAAGACCGCGCTGC
TTTCCCGCCCCGACGGCCTC

Product: cytochrome C biogenesis protein, heme exporter protein B

Products: NA

Alternate protein names: Cytochrome C-Type Biogenesis Protein Ccmb

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRRVWLLALRDLRLEVRDRLGVLSALAFLFVNLFVMALALGPEEGALRRAAPGVLWVALAFLSTLLATRAFGRETEEGTL
DDLLLVPGSKEWVYFGKLLFQLLVLLPLALLALFGAAGFFHVPLERGGALFLTLALGSLGYASVATFYAGLLSRLRGREV
LLPLLLFSLVVPVVLASVRATAGVAEGLPLGEVAPWWQLLLVFDLVYVTASALLFPLVMEG

Sequences:

>Translated_221_residues
MRRVWLLALRDLRLEVRDRLGVLSALAFLFVNLFVMALALGPEEGALRRAAPGVLWVALAFLSTLLATRAFGRETEEGTL
DDLLLVPGSKEWVYFGKLLFQLLVLLPLALLALFGAAGFFHVPLERGGALFLTLALGSLGYASVATFYAGLLSRLRGREV
LLPLLLFSLVVPVVLASVRATAGVAEGLPLGEVAPWWQLLLVFDLVYVTASALLFPLVMEG
>Mature_221_residues
MRRVWLLALRDLRLEVRDRLGVLSALAFLFVNLFVMALALGPEEGALRRAAPGVLWVALAFLSTLLATRAFGRETEEGTL
DDLLLVPGSKEWVYFGKLLFQLLVLLPLALLALFGAAGFFHVPLERGGALFLTLALGSLGYASVATFYAGLLSRLRGREV
LLPLLLFSLVVPVVLASVRATAGVAEGLPLGEVAPWWQLLLVFDLVYVTASALLFPLVMEG

Specific function: Unknown

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23959; Mature: 23959

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVWLLALRDLRLEVRDRLGVLSALAFLFVNLFVMALALGPEEGALRRAAPGVLWVALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH
FLSTLLATRAFGRETEEGTLDDLLLVPGSKEWVYFGKLLFQLLVLLPLALLALFGAAGFF
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
HVPLERGGALFLTLALGSLGYASVATFYAGLLSRLRGREVLLPLLLFSLVVPVVLASVRA
ECHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TAGVAEGLPLGEVAPWWQLLLVFDLVYVTASALLFPLVMEG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRVWLLALRDLRLEVRDRLGVLSALAFLFVNLFVMALALGPEEGALRRAAPGVLWVALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH
FLSTLLATRAFGRETEEGTLDDLLLVPGSKEWVYFGKLLFQLLVLLPLALLALFGAAGFF
HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
HVPLERGGALFLTLALGSLGYASVATFYAGLLSRLRGREVLLPLLLFSLVVPVVLASVRA
ECHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TAGVAEGLPLGEVAPWWQLLLVFDLVYVTASALLFPLVMEG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA