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The map label for this gene is ccdA [H]

Identifier: 55981378

GI number: 55981378

Start: 1340727

End: 1341395

Strand: Reverse

Name: ccdA [H]

Synonym: TTHA1409

Alternate gene names: 55981378

Gene position: 1341395-1340727 (Counterclockwise)

Preceding gene: 55981379

Following gene: 55981377

Centisome position: 72.52

GC content: 68.46

Gene sequence:

>669_bases
ATGTCGCTTTCCTTGACGGCGGCCTTTTTAGCGGGGGTGCTCTCCTTCCTCTCCCCCTGCGTCTTGCCCCTCGTCCCCAC
CTACCTCTTCTACCTGGGGGGGGAGAGGGGGCGCCCCCTCTTCAACGCCCTCTTCTTCATCCTGGGCTTTGGGGCGGTCT
TCTTCCTCCTGGGCCTGCCCTTCACCCTCCTCGGGGGGCTCCTCTTTGAGCACCGCCAGACCCTGGCCCGCGTCGGAGGG
GTGGTCCTCGTCCTCTTCGGCCTCTACATGCTGGGCCTGAGGCCCAGGTGGGGGGTTTCCCTCCGCTACGAGGGGGAGAC
CTCCCGCCCCTTGGGGGCCTTCCTCCTTGGGGCCACCCTGGCCCTGGGCTGGACCCCGTGCATCGGCCCGATCCTCGGGG
CCATCCTGACCCTCACCGCCGTGGGGGGCGGGGTGGGGTTCCTCCTGGCCTACATCCTGGGCCTCGCCGTGCCCTTCTTC
GTGGTGGCCCTCTTCGCCGACCGGATCAAGGGGTGGCTTAGGCGCGCCGGCCGGATCTCCCACTACGTGGAGGTCCTGGC
GGGCGTGGTCCTGGTCCTCGTGGGGGTTCTGCTCTTCACCGGCACCTTCACGGCCCTCAACACCTTCTTCCTGCGGATCA
CCCCCGAGTGGCTCCAGAGGTACCTCTAG

Upstream 100 bases:

>100_bases
GACCCTCCCCCAGATCCGGATGCCCGCCCGGGAGCTTCTGGAGCTGGACCCCGAGGCCAAGCGCCGCTTCCCCTGGCTCA
CCCTGCCTTAGGATGGGGGT

Downstream 100 bases:

>100_bases
GACCTTTGTCCCCGGAGGCTTCGCCTAGACTGGTGAAGGCATGCTCTTGCGCCTCGAGGCCGTTTCCAAGCGCTTTGGCC
GCGACTGGGTCCTCCGCGAT

Product: cytochrome C biogenesis protein CcdA

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSLSLTAAFLAGVLSFLSPCVLPLVPTYLFYLGGERGRPLFNALFFILGFGAVFFLLGLPFTLLGGLLFEHRQTLARVGG
VVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATLALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFF
VVALFADRIKGWLRRAGRISHYVEVLAGVVLVLVGVLLFTGTFTALNTFFLRITPEWLQRYL

Sequences:

>Translated_222_residues
MSLSLTAAFLAGVLSFLSPCVLPLVPTYLFYLGGERGRPLFNALFFILGFGAVFFLLGLPFTLLGGLLFEHRQTLARVGG
VVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATLALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFF
VVALFADRIKGWLRRAGRISHYVEVLAGVVLVLVGVLLFTGTFTALNTFFLRITPEWLQRYL
>Mature_221_residues
SLSLTAAFLAGVLSFLSPCVLPLVPTYLFYLGGERGRPLFNALFFILGFGAVFFLLGLPFTLLGGLLFEHRQTLARVGGV
VLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATLALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFFV
VALFADRIKGWLRRAGRISHYVEVLAGVVLVLVGVLLFTGTFTALNTFFLRITPEWLQRYL

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 24044; Mature: 23913

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSLTAAFLAGVLSFLSPCVLPLVPTYLFYLGGERGRPLFNALFFILGFGAVFFLLGLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FTLLGGLLFEHRQTLARVGGVVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH
ALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFFVVALFADRIKGWLRRAGRIS
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYVEVLAGVVLVLVGVLLFTGTFTALNTFFLRITPEWLQRYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
SLSLTAAFLAGVLSFLSPCVLPLVPTYLFYLGGERGRPLFNALFFILGFGAVFFLLGLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FTLLGGLLFEHRQTLARVGGVVLVLFGLYMLGLRPRWGVSLRYEGETSRPLGAFLLGATL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHH
ALGWTPCIGPILGAILTLTAVGGGVGFLLAYILGLAVPFFVVALFADRIKGWLRRAGRIS
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYVEVLAGVVLVLVGVLLFTGTFTALNTFFLRITPEWLQRYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]